RNA–Protein interactions for RNA: ENST00000613795.4

CLCN3-211, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 5 BASIC

Gene CLCN3, Length 5,874 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-211ENST00000613795 ZNF391Q9UJN7 358 aa6.16□□□□□ -1.42
CLCN3-211ENST00000613795 HDGFL3Q9Y3E1 203 aa6.16□□□□□ -1.42
CLCN3-211ENST00000613795 LOC105378220A0A1B0GUY1 285 aaPredicted RBP6.15□□□□□ -1.42
CLCN3-211ENST00000613795 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.15□□□□□ -1.42
CLCN3-211ENST00000613795 ZNF891A8MT65 544 aaPredicted RBP6.15□□□□□ -1.42
CLCN3-211ENST00000613795 SMPD2O60906 423 aa6.15□□□□□ -1.42
CLCN3-211ENST00000613795 CST7O76096 145 aa6.15□□□□□ -1.42
CLCN3-211ENST00000613795 HIST1H1DP16402 221 aaKnown RBP6.15□□□□□ -1.42
CLCN3-211ENST00000613795 FZD2Q14332 565 aa6.15□□□□□ -1.42
CLCN3-211ENST00000613795 DUSP5Q16690 384 aa6.15□□□□□ -1.42
CLCN3-211ENST00000613795 NKAIN1Q4KMZ8 207 aa6.15□□□□□ -1.42
CLCN3-211ENST00000613795 SPNS3Q6ZMD2 512 aa6.15□□□□□ -1.42
CLCN3-211ENST00000613795 RPS19BP1Q86WX3 136 aaKnown RBP6.15□□□□□ -1.42
CLCN3-211ENST00000613795 ZNF547Q8IVP9 402 aa6.15□□□□□ -1.42
CLCN3-211ENST00000613795 GMPPAQ96IJ6 420 aaPredicted RBP6.15□□□□□ -1.42
CLCN3-211ENST00000613795 TAAR6Q96RI8 345 aa6.15□□□□□ -1.42
CLCN3-211ENST00000613795 ATP5SQ99766 215 aa6.15□□□□□ -1.42
CLCN3-211ENST00000613795 FOXJ2Q9P0K8 574 aa6.15□□□□□ -1.42
CLCN3-211ENST00000613795 DOK5Q9P104 306 aa6.15□□□□□ -1.42
CLCN3-211ENST00000613795 UBE2L5PA0A1B0GUS4 154 aa6.15□□□□□ -1.42
CLCN3-211ENST00000613795 CTSDP07339 412 aaPredicted RBP6.15□□□□□ -1.42
CLCN3-211ENST00000613795 C21orf58P58505 322 aa6.15□□□□□ -1.42
CLCN3-211ENST00000613795 PMP22Q01453 160 aa6.15□□□□□ -1.42
CLCN3-211ENST00000613795 PLPPR5Q32ZL2 321 aa6.15□□□□□ -1.42
CLCN3-211ENST00000613795 LRRC18Q8N456 261 aa6.15□□□□□ -1.42
CLCN3-211ENST00000613795 OR51E1Q8TCB6 317 aa6.15□□□□□ -1.42
CLCN3-211ENST00000613795 RPS4Y2Q8TD47 263 aa6.15□□□□□ -1.42
CLCN3-211ENST00000613795 C11orf40Q8WZ69 217 aa6.15□□□□□ -1.42
CLCN3-211ENST00000613795 OR8B4Q96RC9 309 aa6.15□□□□□ -1.42
CLCN3-211ENST00000613795 UBE2ZQ9H832 354 aaPredicted RBP6.15□□□□□ -1.42
CLCN3-211ENST00000613795 ZDHHC8Q9ULC8 765 aa6.15□□□□□ -1.42
CLCN3-211ENST00000613795 GPR37O15354 613 aa6.15□□□□□ -1.42
CLCN3-211ENST00000613795 NXPH2O95156 264 aa6.15□□□□□ -1.42
CLCN3-211ENST00000613795 TRGC2P03986 189 aa6.15□□□□□ -1.42
CLCN3-211ENST00000613795 GPR12P47775 334 aa6.15□□□□□ -1.42
CLCN3-211ENST00000613795 SPATA45Q537H7 98 aa6.15□□□□□ -1.42
CLCN3-211ENST00000613795 ACER2Q5QJU3 275 aa6.15□□□□□ -1.42
CLCN3-211ENST00000613795 ZNF740Q8NDX6 193 aa6.15□□□□□ -1.42
CLCN3-211ENST00000613795 SMIM14Q96QK8 99 aa6.15□□□□□ -1.42
CLCN3-211ENST00000613795 RSG1Q9BU20 258 aa6.15□□□□□ -1.42
CLCN3-211ENST00000613795 COL25A1Q9BXS0 654 aaPredicted RBP6.15□□□□□ -1.42
CLCN3-211ENST00000613795 SLCO1C1Q9NYB5 712 aa6.15□□□□□ -1.42
CLCN3-211ENST00000613795 ING1Q9UK53 422 aaPredicted RBP6.15□□□□□ -1.42
CLCN3-211ENST00000613795 ZNF346Q9UL40 294 aaKnown RBP6.15□□□□□ -1.42
CLCN3-211ENST00000613795 SLC17A4Q9Y2C5 497 aa6.15□□□□□ -1.42
CLCN3-211ENST00000613795 PPIL1Q9Y3C6 166 aa6.15□□□□□ -1.42
CLCN3-211ENST00000613795 A0A1W2PPC4 97 aa6.15□□□□□ -1.43
CLCN3-211ENST00000613795 DNASE2O00115 360 aaPredicted RBP6.15□□□□□ -1.43
CLCN3-211ENST00000613795 ARPC3O15145 178 aa6.15□□□□□ -1.43
CLCN3-211ENST00000613795 F12P00748 615 aaPredicted RBP6.15□□□□□ -1.43
CLCN3-211ENST00000613795 HSPB1P04792 205 aaKnown RBP6.15□□□□□ -1.43
CLCN3-211ENST00000613795 BRS3P32247 399 aa6.15□□□□□ -1.43
CLCN3-211ENST00000613795 PXNP49023 591 aaPredicted RBP6.15□□□□□ -1.43
CLCN3-211ENST00000613795 GNG4P50150 75 aa6.15□□□□□ -1.43
CLCN3-211ENST00000613795 RTL8BQ17RB0 113 aa6.15□□□□□ -1.43
CLCN3-211ENST00000613795 RIPPLY2Q5TAB7 128 aa6.15□□□□□ -1.43
CLCN3-211ENST00000613795 PRAMEF5Q5TYX0 476 aa6.15□□□□□ -1.43
CLCN3-211ENST00000613795 PRAMEF6Q5VXH4 476 aa6.15□□□□□ -1.43
CLCN3-211ENST00000613795 NUFIP2Q7Z417 695 aaKnown RBP6.15□□□□□ -1.43
CLCN3-211ENST00000613795 ZNF573Q86YE8 665 aa6.15□□□□□ -1.43
CLCN3-211ENST00000613795 FAM216AQ8WUB2 273 aa6.15□□□□□ -1.43
CLCN3-211ENST00000613795 PBOV1Q9GZY1 135 aa6.15□□□□□ -1.43
CLCN3-211ENST00000613795 TLNRD1Q9H1K6 362 aa6.15□□□□□ -1.43
CLCN3-211ENST00000613795 HSPB8Q9UJY1 196 aa6.15□□□□□ -1.43
CLCN3-211ENST00000613795 A0A0B4J293 547 aa6.15□□□□□ -1.43
CLCN3-211ENST00000613795 SH2D1BO14796 132 aa6.15□□□□□ -1.43
CLCN3-211ENST00000613795 DEGS1O15121 323 aa6.15□□□□□ -1.43
CLCN3-211ENST00000613795 ENSAO43768 121 aaKnown RBP6.15□□□□□ -1.43
CLCN3-211ENST00000613795 PDE6DO43924 150 aa6.15□□□□□ -1.43
CLCN3-211ENST00000613795 OR7C2O60412 319 aa6.15□□□□□ -1.43
CLCN3-211ENST00000613795 FCMRO60667 390 aa6.15□□□□□ -1.43
CLCN3-211ENST00000613795 CYC1P08574 325 aa6.15□□□□□ -1.43
CLCN3-211ENST00000613795 OR5AL1P0C617 328 aa6.15□□□□□ -1.43
CLCN3-211ENST00000613795 RTN4RL1Q86UN2 441 aaPredicted RBP6.15□□□□□ -1.43
CLCN3-211ENST00000613795 LIPHQ8WWY8 451 aa6.15□□□□□ -1.43
CLCN3-211ENST00000613795 MOGAT1Q96PD6 335 aa6.15□□□□□ -1.43
CLCN3-211ENST00000613795 TBX21Q9UL17 535 aa6.15□□□□□ -1.43
CLCN3-211ENST00000613795 PRSS37A4D1T9 235 aa6.14□□□□□ -1.43
CLCN3-211ENST00000613795 PGA4P0DJD7 388 aa6.14□□□□□ -1.43
CLCN3-211ENST00000613795 PGA5P0DJD9 388 aa6.14□□□□□ -1.43
CLCN3-211ENST00000613795 FABP2P12104 132 aa6.14□□□□□ -1.43
CLCN3-211ENST00000613795 HOXA6P31267 233 aa6.14□□□□□ -1.43
CLCN3-211ENST00000613795 THBS4P35443 961 aa6.14□□□□□ -1.43
CLCN3-211ENST00000613795 ACAA2P42765 397 aaKnown RBP6.14□□□□□ -1.43
CLCN3-211ENST00000613795 CSN1S1P47710 185 aa6.14□□□□□ -1.43
CLCN3-211ENST00000613795 FHITP49789 147 aa6.14□□□□□ -1.43
CLCN3-211ENST00000613795 OR1D5P58170 312 aa6.14□□□□□ -1.43
CLCN3-211ENST00000613795 TIAL1Q01085 375 aaKnown RBP eCLIP6.14□□□□□ -1.43
CLCN3-211ENST00000613795 ERV3-1Q14264 604 aa6.14□□□□□ -1.43
CLCN3-211ENST00000613795 INSL4Q14641 139 aa6.14□□□□□ -1.43
CLCN3-211ENST00000613795 SHHQ15465 462 aa6.14□□□□□ -1.43
CLCN3-211ENST00000613795 Q1RN00 199 aa6.14□□□□□ -1.43
CLCN3-211ENST00000613795 DMRTA1Q5VZB9 504 aa6.14□□□□□ -1.43
CLCN3-211ENST00000613795 MARCH3Q86UD3 253 aa6.14□□□□□ -1.43
CLCN3-211ENST00000613795 OR1L6Q8NGR2 347 aa6.14□□□□□ -1.43
CLCN3-211ENST00000613795 CITED1Q99966 193 aa6.14□□□□□ -1.43
CLCN3-211ENST00000613795 WDR61Q9GZS3 305 aaKnown RBP6.14□□□□□ -1.43
CLCN3-211ENST00000613795 SLC6A13Q9NSD5 602 aa6.14□□□□□ -1.43
CLCN3-211ENST00000613795 GNG12Q9UBI6 72 aa6.14□□□□□ -1.43
CLCN3-211ENST00000613795 KCNE5Q9UJ90 142 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms