RNA–Protein interactions for RNA: ENST00000611712.4

LIG4-204, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 4 BASIC

Gene LIG4, Length 4,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-204ENST00000611712 CD8AP01732 235 aa7.62□□□□□ -1.19
LIG4-204ENST00000611712 SFTA3P0C7M3 94 aa7.62□□□□□ -1.19
LIG4-204ENST00000611712 RAC2P15153 192 aa7.62□□□□□ -1.19
LIG4-204ENST00000611712 TUBG1P23258 451 aa7.62□□□□□ -1.19
LIG4-204ENST00000611712 SRD5A2P31213 254 aa7.62□□□□□ -1.19
LIG4-204ENST00000611712 RPS10P46783 165 aaKnown RBP7.62□□□□□ -1.19
LIG4-204ENST00000611712 ASCL1P50553 236 aa7.62□□□□□ -1.19
LIG4-204ENST00000611712 DHODHQ02127 395 aa7.62□□□□□ -1.19
LIG4-204ENST00000611712 TGFBR3Q03167 851 aa7.62□□□□□ -1.19
LIG4-204ENST00000611712 PABPC1L2AQ5JQF8 200 aa7.62□□□□□ -1.19
LIG4-204ENST00000611712 ADAM5Q6NVV9 412 aa7.62□□□□□ -1.19
LIG4-204ENST00000611712 RPUSD3Q6P087 351 aaKnown RBP7.62□□□□□ -1.19
LIG4-204ENST00000611712 EXTL1Q92935 676 aa7.62□□□□□ -1.19
LIG4-204ENST00000611712 AKIRIN1Q9H9L7 192 aaPredicted RBP7.62□□□□□ -1.19
LIG4-204ENST00000611712 OR5AC2Q9NZP5 309 aa7.62□□□□□ -1.19
LIG4-204ENST00000611712 COL4A3Q01955 1670 aa7.62□□□□□ -1.19
LIG4-204ENST00000611712 PTPRZ1P23471 2315 aaPredicted RBP7.62□□□□□ -1.19
LIG4-204ENST00000611712 GEMIN2O14893 280 aaKnown RBP7.62□□□□□ -1.19
LIG4-204ENST00000611712 SSSCA1O60232 199 aa7.62□□□□□ -1.19
LIG4-204ENST00000611712 IFNA17P01571 189 aa7.62□□□□□ -1.19
LIG4-204ENST00000611712 CTSDP07339 412 aaPredicted RBP7.62□□□□□ -1.19
LIG4-204ENST00000611712 FGF2P09038 288 aa7.62□□□□□ -1.19
LIG4-204ENST00000611712 HNF4GQ14541 408 aa7.62□□□□□ -1.19
LIG4-204ENST00000611712 CBLN2Q8IUK8 224 aa7.62□□□□□ -1.19
LIG4-204ENST00000611712 ADPRHL1Q8NDY3 354 aa7.62□□□□□ -1.19
LIG4-204ENST00000611712 OR14K1Q8NGZ2 314 aa7.62□□□□□ -1.19
LIG4-204ENST00000611712 MRPL24Q96A35 216 aaKnown RBP7.62□□□□□ -1.19
LIG4-204ENST00000611712 ZNF524Q96C55 264 aa7.62□□□□□ -1.19
LIG4-204ENST00000611712 MRPS24Q96EL2 167 aaKnown RBP7.62□□□□□ -1.19
LIG4-204ENST00000611712 UQCC1Q9NVA1 299 aa7.62□□□□□ -1.19
LIG4-204ENST00000611712 TRAV14DV4A0A0A6YYC5 116 aa7.62□□□□□ -1.19
LIG4-204ENST00000611712 PDCD6O75340 191 aa7.62□□□□□ -1.19
LIG4-204ENST00000611712 HOXD4P09016 255 aaPredicted RBP7.62□□□□□ -1.19
LIG4-204ENST00000611712 UBE2KP61086 200 aa7.62□□□□□ -1.19
LIG4-204ENST00000611712 OR5AS1Q8N127 324 aa7.62□□□□□ -1.19
LIG4-204ENST00000611712 ZNF611Q8N823 705 aa7.62□□□□□ -1.19
LIG4-204ENST00000611712 SLC30A7Q8NEW0 376 aa7.62□□□□□ -1.19
LIG4-204ENST00000611712 OR56B2PQ8NGI1 322 aa7.62□□□□□ -1.19
LIG4-204ENST00000611712 SFT2D1Q8WV19 159 aa7.62□□□□□ -1.19
LIG4-204ENST00000611712 WDR13Q9H1Z4 485 aa7.62□□□□□ -1.19
LIG4-204ENST00000611712 C5orf66Q9H5L9 145 aa7.62□□□□□ -1.19
LIG4-204ENST00000611712 NAA60Q9H7X0 242 aa7.62□□□□□ -1.19
LIG4-204ENST00000611712 MED9Q9NWA0 146 aa7.62□□□□□ -1.19
LIG4-204ENST00000611712 P4HTMQ9NXG6 502 aa7.62□□□□□ -1.19
LIG4-204ENST00000611712 LPAR3Q9UBY5 353 aa7.62□□□□□ -1.19
LIG4-204ENST00000611712 AK3Q9UIJ7 227 aa7.62□□□□□ -1.19
LIG4-204ENST00000611712 UMAD1C9J7I0 102 aa7.61□□□□□ -1.19
LIG4-204ENST00000611712 TXNL1O43396 289 aa7.61□□□□□ -1.19
LIG4-204ENST00000611712 GPM6AP51674 278 aa7.61□□□□□ -1.19
LIG4-204ENST00000611712 MRPS34P82930 218 aaKnown RBP7.61□□□□□ -1.19
LIG4-204ENST00000611712 ARF1P84077 181 aaKnown RBP7.61□□□□□ -1.19
LIG4-204ENST00000611712 ZNF674Q2M3X9 581 aa7.61□□□□□ -1.19
LIG4-204ENST00000611712 LY6G6FQ5SQ64 297 aa7.61□□□□□ -1.19
LIG4-204ENST00000611712 DYRK2Q92630 601 aa7.61□□□□□ -1.19
LIG4-204ENST00000611712 ADAT1Q9BUB4 502 aaKnown RBP7.61□□□□□ -1.19
LIG4-204ENST00000611712 MYOZ1Q9NP98 299 aaPredicted RBP7.61□□□□□ -1.19
LIG4-204ENST00000611712 RCL1Q9Y2P8 373 aaKnown RBP7.61□□□□□ -1.19
LIG4-204ENST00000611712 KCNMB2Q9Y691 235 aa7.61□□□□□ -1.19
LIG4-204ENST00000611712 FANCMQ8IYD8 2048 aa7.61□□□□□ -1.19
LIG4-204ENST00000611712 KIAA1671Q9BY89 1806 aa7.61□□□□□ -1.19
LIG4-204ENST00000611712 MED19A0JLT2 244 aaPredicted RBP7.61□□□□□ -1.19
LIG4-204ENST00000611712 PATE3B3GLJ2 98 aa7.61□□□□□ -1.19
LIG4-204ENST00000611712 ZNF732B4DXR9 585 aa7.61□□□□□ -1.19
LIG4-204ENST00000611712 IFNA1P01562 189 aa7.61□□□□□ -1.19
LIG4-204ENST00000611712 HLA-HP01893 362 aa7.61□□□□□ -1.19
LIG4-204ENST00000611712 CCL2P13500 99 aa7.61□□□□□ -1.19
LIG4-204ENST00000611712 CD46P15529 392 aa7.61□□□□□ -1.19
LIG4-204ENST00000611712 CLN3Q13286 438 aa7.61□□□□□ -1.19
LIG4-204ENST00000611712 TRA2AQ13595 282 aaKnown RBP eCLIP7.61□□□□□ -1.19
LIG4-204ENST00000611712 RSPO4Q2I0M5 234 aaPredicted RBP7.61□□□□□ -1.19
LIG4-204ENST00000611712 MIDNQ504T8 468 aa7.61□□□□□ -1.19
LIG4-204ENST00000611712 UBALD2Q8IYN6 164 aa7.61□□□□□ -1.19
LIG4-204ENST00000611712 ZDHHC23Q8IYP9 409 aa7.61□□□□□ -1.19
LIG4-204ENST00000611712 ZNF441Q8N8Z8 693 aa7.61□□□□□ -1.19
LIG4-204ENST00000611712 CNEP1R1Q8N9A8 125 aa7.61□□□□□ -1.19
LIG4-204ENST00000611712 OR10J5Q8NHC4 309 aa7.61□□□□□ -1.19
LIG4-204ENST00000611712 TCTEX1D2Q8WW35 142 aa7.61□□□□□ -1.19
LIG4-204ENST00000611712 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.61□□□□□ -1.19
LIG4-204ENST00000611712 A0A0U1RQV5 110 aa7.61□□□□□ -1.19
LIG4-204ENST00000611712 A0A1B0GTI1 187 aa7.61□□□□□ -1.19
LIG4-204ENST00000611712 TRIM77I1YAP6 450 aa7.61□□□□□ -1.19
LIG4-204ENST00000611712 MASP2O00187 686 aa7.61□□□□□ -1.19
LIG4-204ENST00000611712 CST7O76096 145 aa7.61□□□□□ -1.19
LIG4-204ENST00000611712 MELTFP08582 738 aa7.61□□□□□ -1.19
LIG4-204ENST00000611712 H2AFB1P0C5Y9 115 aa7.61□□□□□ -1.19
LIG4-204ENST00000611712 EDN3P14138 238 aa7.61□□□□□ -1.19
LIG4-204ENST00000611712 CBR1P16152 277 aa7.61□□□□□ -1.19
LIG4-204ENST00000611712 IL2RGP31785 369 aa7.61□□□□□ -1.19
LIG4-204ENST00000611712 ANKRD55Q3KP44 614 aa7.61□□□□□ -1.19
LIG4-204ENST00000611712 PIGYQ3MUY2 71 aa7.61□□□□□ -1.19
LIG4-204ENST00000611712 PLAC9Q5JTB6 97 aa7.61□□□□□ -1.19
LIG4-204ENST00000611712 POC1BQ8TC44 478 aa7.61□□□□□ -1.19
LIG4-204ENST00000611712 M1APQ8TC57 530 aa7.61□□□□□ -1.19
LIG4-204ENST00000611712 SAT2Q96F10 170 aaPredicted RBP7.61□□□□□ -1.19
LIG4-204ENST00000611712 SMOC1Q9H4F8 434 aa7.61□□□□□ -1.19
LIG4-204ENST00000611712 WDR54Q9H977 334 aa7.61□□□□□ -1.19
LIG4-204ENST00000611712 FN3KRPQ9HA64 309 aa7.61□□□□□ -1.19
LIG4-204ENST00000611712 OBP2BQ9NPH6 170 aa7.61□□□□□ -1.19
LIG4-204ENST00000611712 NCOR1O75376 2440 aa7.6□□□□□ -1.19
LIG4-204ENST00000611712 OR6C65A6NJZ3 312 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms