RNA–Protein interactions for RNA: ENST00000610556.4

SYNPO2-206, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-206ENST00000610556 KMT5CQ86Y97 462 aa6.04□□□□□ -1.44
SYNPO2-206ENST00000610556 LDLRAD3Q86YD5 345 aa6.04□□□□□ -1.44
SYNPO2-206ENST00000610556 OR5AS1Q8N127 324 aa6.04□□□□□ -1.44
SYNPO2-206ENST00000610556 SMRP1Q8NCR6 262 aa6.04□□□□□ -1.44
SYNPO2-206ENST00000610556 CCDC54Q8NEL0 328 aa6.04□□□□□ -1.44
SYNPO2-206ENST00000610556 OR13G1Q8NGZ3 307 aa6.04□□□□□ -1.44
SYNPO2-206ENST00000610556 RXFP4Q8TDU9 374 aa6.04□□□□□ -1.44
SYNPO2-206ENST00000610556 RHBDD1Q8TEB9 315 aa6.04□□□□□ -1.44
SYNPO2-206ENST00000610556 ZNF524Q96C55 264 aa6.04□□□□□ -1.44
SYNPO2-206ENST00000610556 ZNF501Q96CX3 271 aaPredicted RBP6.04□□□□□ -1.44
SYNPO2-206ENST00000610556 NMES1Q9C002 83 aa6.04□□□□□ -1.44
SYNPO2-206ENST00000610556 PLEKHA2Q9HB19 425 aa6.04□□□□□ -1.44
SYNPO2-206ENST00000610556 PLXNB3Q9ULL4 1909 aa6.04□□□□□ -1.44
SYNPO2-206ENST00000610556 C5orf49A4QMS7 147 aa6.04□□□□□ -1.44
SYNPO2-206ENST00000610556 RNF222A6NCQ9 220 aa6.04□□□□□ -1.44
SYNPO2-206ENST00000610556 PRSS44E7EML9 344 aa6.04□□□□□ -1.44
SYNPO2-206ENST00000610556 GPR37O15354 613 aa6.04□□□□□ -1.44
SYNPO2-206ENST00000610556 HLA-HP01893 362 aa6.04□□□□□ -1.44
SYNPO2-206ENST00000610556 GLULP15104 373 aa6.04□□□□□ -1.44
SYNPO2-206ENST00000610556 RAB11AP62491 216 aa6.04□□□□□ -1.44
SYNPO2-206ENST00000610556 LTC4SQ16873 150 aa6.04□□□□□ -1.44
SYNPO2-206ENST00000610556 C1QL2Q7Z5L3 287 aa6.04□□□□□ -1.44
SYNPO2-206ENST00000610556 IFI44Q8TCB0 444 aa6.04□□□□□ -1.44
SYNPO2-206ENST00000610556 SUCNR1Q9BXA5 334 aa6.04□□□□□ -1.44
SYNPO2-206ENST00000610556 MED9Q9NWA0 146 aa6.04□□□□□ -1.44
SYNPO2-206ENST00000610556 ANXA10Q9UJ72 324 aa6.04□□□□□ -1.44
SYNPO2-206ENST00000610556 GPR132Q9UNW8 380 aa6.04□□□□□ -1.44
SYNPO2-206ENST00000610556 MTCH2Q9Y6C9 303 aa6.04□□□□□ -1.44
SYNPO2-206ENST00000610556 ICE1Q9Y2F5 2266 aa6.04□□□□□ -1.44
SYNPO2-206ENST00000610556 MEX3AA1L020 520 aaKnown RBP6.04□□□□□ -1.44
SYNPO2-206ENST00000610556 NUDT19A8MXV4 375 aa6.04□□□□□ -1.44
SYNPO2-206ENST00000610556 H7C1Q1 480 aa6.04□□□□□ -1.44
SYNPO2-206ENST00000610556 GEMIN2O14893 280 aaKnown RBP6.04□□□□□ -1.44
SYNPO2-206ENST00000610556 CD74P04233 296 aa6.04□□□□□ -1.44
SYNPO2-206ENST00000610556 ISG15P05161 165 aa6.04□□□□□ -1.44
SYNPO2-206ENST00000610556 IFI6P09912 130 aa6.04□□□□□ -1.44
SYNPO2-206ENST00000610556 ECI1P42126 302 aa6.04□□□□□ -1.44
SYNPO2-206ENST00000610556 CLEC12BQ2HXU8 276 aa6.04□□□□□ -1.44
SYNPO2-206ENST00000610556 PLPPR5Q32ZL2 321 aa6.04□□□□□ -1.44
SYNPO2-206ENST00000610556 PIGYQ3MUY2 71 aa6.04□□□□□ -1.44
SYNPO2-206ENST00000610556 OR1F12Q8NHA8 337 aa6.04□□□□□ -1.44
SYNPO2-206ENST00000610556 OCSTAMPQ9BR26 566 aa6.04□□□□□ -1.44
SYNPO2-206ENST00000610556 RAB33BQ9H082 229 aa6.04□□□□□ -1.44
SYNPO2-206ENST00000610556 C12orf49Q9H741 205 aa6.04□□□□□ -1.44
SYNPO2-206ENST00000610556 UBE2ZQ9H832 354 aaPredicted RBP6.04□□□□□ -1.44
SYNPO2-206ENST00000610556 OCIAD1Q9NX40 245 aa6.04□□□□□ -1.44
SYNPO2-206ENST00000610556 GNG13Q9P2W3 67 aa6.04□□□□□ -1.44
SYNPO2-206ENST00000610556 ZMAT5Q9UDW3 170 aaKnown RBP6.04□□□□□ -1.44
SYNPO2-206ENST00000610556 ZNF107Q9UII5 783 aaPredicted RBP6.04□□□□□ -1.44
SYNPO2-206ENST00000610556 TRAPPC2LQ9UL33 140 aa6.04□□□□□ -1.44
SYNPO2-206ENST00000610556 TIMM10BQ9Y5J6 103 aa6.04□□□□□ -1.44
SYNPO2-206ENST00000610556 hCG_1809904A0A1W2PP81 198 aa6.03□□□□□ -1.44
SYNPO2-206ENST00000610556 A0A1W2PR64 198 aa6.03□□□□□ -1.44
SYNPO2-206ENST00000610556 A0A1W2PRV1 198 aa6.03□□□□□ -1.44
SYNPO2-206ENST00000610556 ZNF98A6NK75 572 aa6.03□□□□□ -1.44
SYNPO2-206ENST00000610556 CDRT15L2A8MXV6 281 aa6.03□□□□□ -1.44
SYNPO2-206ENST00000610556 TIAF1O95411 115 aa6.03□□□□□ -1.44
SYNPO2-206ENST00000610556 ACTL6AO96019 429 aa6.03□□□□□ -1.44
SYNPO2-206ENST00000610556 CCL3P10147 92 aa6.03□□□□□ -1.44
SYNPO2-206ENST00000610556 APLNRP35414 380 aa6.03□□□□□ -1.44
SYNPO2-206ENST00000610556 IDH3GP51553 393 aaPredicted RBP6.03□□□□□ -1.44
SYNPO2-206ENST00000610556 P2RY4P51582 365 aa6.03□□□□□ -1.44
SYNPO2-206ENST00000610556 ELLP55199 621 aaPredicted RBP6.03□□□□□ -1.44
SYNPO2-206ENST00000610556 POLR2GP62487 172 aaKnown RBP eCLIP6.03□□□□□ -1.44
SYNPO2-206ENST00000610556 TESK1Q15569 626 aa6.03□□□□□ -1.44
SYNPO2-206ENST00000610556 HMGN3Q15651 99 aa6.03□□□□□ -1.44
SYNPO2-206ENST00000610556 C4orf17Q53FE4 359 aa6.03□□□□□ -1.44
SYNPO2-206ENST00000610556 OR2B11Q5JQS5 317 aa6.03□□□□□ -1.44
SYNPO2-206ENST00000610556 PLAC9Q5JTB6 97 aa6.03□□□□□ -1.44
SYNPO2-206ENST00000610556 FNDC7Q5VTL7 733 aa6.03□□□□□ -1.44
SYNPO2-206ENST00000610556 TFAP2EQ6VUC0 442 aa6.03□□□□□ -1.44
SYNPO2-206ENST00000610556 SLC25A45Q8N413 288 aa6.03□□□□□ -1.44
SYNPO2-206ENST00000610556 OIT3Q8WWZ8 545 aa6.03□□□□□ -1.44
SYNPO2-206ENST00000610556 PTX4Q96A99 478 aa6.03□□□□□ -1.44
SYNPO2-206ENST00000610556 GPHA2Q96T91 129 aa6.03□□□□□ -1.44
SYNPO2-206ENST00000610556 NIPSNAP3BQ9BS92 247 aa6.03□□□□□ -1.44
SYNPO2-206ENST00000610556 AKIRIN1Q9H9L7 192 aaPredicted RBP6.03□□□□□ -1.44
SYNPO2-206ENST00000610556 C19orf12Q9NSK7 152 aa6.03□□□□□ -1.44
SYNPO2-206ENST00000610556 MCTS1Q9ULC4 181 aaKnown RBP6.03□□□□□ -1.44
SYNPO2-206ENST00000610556 RALGAPA1Q6GYQ0 2036 aa6.03□□□□□ -1.44
SYNPO2-206ENST00000610556 COL4A4P53420 1690 aaPredicted RBP6.03□□□□□ -1.44
SYNPO2-206ENST00000610556 ESPL1Q14674 2120 aa6.03□□□□□ -1.44
SYNPO2-206ENST00000610556 BPTFQ12830 3046 aa6.03□□□□□ -1.44
SYNPO2-206ENST00000610556 A0A0U1RQK1 487 aa6.03□□□□□ -1.44
SYNPO2-206ENST00000610556 WDR1O75083 606 aa6.03□□□□□ -1.44
SYNPO2-206ENST00000610556 TUSC2O75896 110 aa6.03□□□□□ -1.44
SYNPO2-206ENST00000610556 ICAM2P13598 275 aa6.03□□□□□ -1.44
SYNPO2-206ENST00000610556 KLK2P20151 261 aa6.03□□□□□ -1.44
SYNPO2-206ENST00000610556 DVL1P1P54792 670 aaPredicted RBP6.03□□□□□ -1.44
SYNPO2-206ENST00000610556 CLDN15P56746 228 aa6.03□□□□□ -1.44
SYNPO2-206ENST00000610556 EXT1Q16394 746 aa6.03□□□□□ -1.44
SYNPO2-206ENST00000610556 TRIM61Q5EBN2 209 aa6.03□□□□□ -1.44
SYNPO2-206ENST00000610556 HIST2H3PS2Q5TEC6 136 aa6.03□□□□□ -1.44
SYNPO2-206ENST00000610556 OR8G2PQ6IF36 304 aa6.03□□□□□ -1.44
SYNPO2-206ENST00000610556 HIST2H3AQ71DI3 136 aa6.03□□□□□ -1.44
SYNPO2-206ENST00000610556 RNF144BQ7Z419 303 aa6.03□□□□□ -1.44
SYNPO2-206ENST00000610556 CADM4Q8NFZ8 388 aa6.03□□□□□ -1.44
SYNPO2-206ENST00000610556 OR8U1Q8NH10 309 aa6.03□□□□□ -1.44
SYNPO2-206ENST00000610556 SDSLQ96GA7 329 aa6.03□□□□□ -1.44
SYNPO2-206ENST00000610556 FOXB1Q99853 325 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms