RNA–Protein interactions for RNA: ENST00000608720.5

CTCFL-219, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best)

Gene CTCFL, Length 2,241 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-219ENST00000608720 SHDQ96IW2 340 aa12.83□□□□□ -0.36
CTCFL-219ENST00000608720 ELL3Q9HB65 397 aaPredicted RBP12.83□□□□□ -0.36
CTCFL-219ENST00000608720 RPS10P5Q9NQ39 176 aa12.83□□□□□ -0.36
CTCFL-219ENST00000608720 ZNF701Q9NV72 531 aaPredicted RBP12.83□□□□□ -0.36
CTCFL-219ENST00000608720 PPP1R14DQ9NXH3 145 aa12.83□□□□□ -0.36
CTCFL-219ENST00000608720 RARRES3Q9UL19 164 aa12.83□□□□□ -0.36
CTCFL-219ENST00000608720 WDR87Q6ZQQ6 2873 aa12.83□□□□□ -0.36
CTCFL-219ENST00000608720 MYO15AQ9UKN7 3530 aa12.83□□□□□ -0.36
CTCFL-219ENST00000608720 K7EPK0 472 aa12.82□□□□□ -0.36
CTCFL-219ENST00000608720 TP53I11O14683 189 aa12.82□□□□□ -0.36
CTCFL-219ENST00000608720 DKK1O94907 266 aa12.82□□□□□ -0.36
CTCFL-219ENST00000608720 IFNA21P01568 189 aa12.82□□□□□ -0.36
CTCFL-219ENST00000608720 GAPDHP04406 335 aaKnown RBP12.82□□□□□ -0.36
CTCFL-219ENST00000608720 FAHP16930 419 aa12.82□□□□□ -0.36
CTCFL-219ENST00000608720 KLK2P20151 261 aa12.82□□□□□ -0.36
CTCFL-219ENST00000608720 RPL12P30050 165 aaKnown RBP12.82□□□□□ -0.36
CTCFL-219ENST00000608720 LPAR6P43657 344 aa12.82□□□□□ -0.36
CTCFL-219ENST00000608720 ZNF133P52736 654 aaPredicted RBP12.82□□□□□ -0.36
CTCFL-219ENST00000608720 C9orf152Q5JTZ5 239 aa12.82□□□□□ -0.36
CTCFL-219ENST00000608720 FOXL2NBQ6ZUU3 175 aa12.82□□□□□ -0.36
CTCFL-219ENST00000608720 SULF2Q8IWU5 870 aa12.82□□□□□ -0.36
CTCFL-219ENST00000608720 FAM71E2Q8N5Q1 922 aa12.82□□□□□ -0.36
CTCFL-219ENST00000608720 COMMD1Q8N668 190 aa12.82□□□□□ -0.36
CTCFL-219ENST00000608720 FNDC9Q8TBE3 224 aa12.82□□□□□ -0.36
CTCFL-219ENST00000608720 DNASE2BQ8WZ79 361 aa12.82□□□□□ -0.36
CTCFL-219ENST00000608720 PLEKHJ1Q9NW61 149 aa12.82□□□□□ -0.36
CTCFL-219ENST00000608720 TUBD1Q9UJT1 453 aa12.82□□□□□ -0.36
CTCFL-219ENST00000608720 PIGLQ9Y2B2 252 aa12.82□□□□□ -0.36
CTCFL-219ENST00000608720 FER1L5A0AVI2 2057 aa12.82□□□□□ -0.36
CTCFL-219ENST00000608720 A0A087WZY1 265 aa12.82□□□□□ -0.36
CTCFL-219ENST00000608720 JTBO76095 146 aa12.82□□□□□ -0.36
CTCFL-219ENST00000608720 IFNA17P01571 189 aa12.82□□□□□ -0.36
CTCFL-219ENST00000608720 SERPINA5P05154 406 aa12.82□□□□□ -0.36
CTCFL-219ENST00000608720 TAS2R60P59551 318 aa12.82□□□□□ -0.36
CTCFL-219ENST00000608720 HIST1H3AP68431 136 aa12.82□□□□□ -0.36
CTCFL-219ENST00000608720 ENDOGQ14249 297 aaKnown RBP12.82□□□□□ -0.36
CTCFL-219ENST00000608720 HIST2H3PS2Q5TEC6 136 aa12.82□□□□□ -0.36
CTCFL-219ENST00000608720 HIST2H3AQ71DI3 136 aa12.82□□□□□ -0.36
CTCFL-219ENST00000608720 SSX9Q7RTT3 188 aa12.82□□□□□ -0.36
CTCFL-219ENST00000608720 ZNF775Q96BV0 537 aaPredicted RBP12.82□□□□□ -0.36
CTCFL-219ENST00000608720 SPSB2Q99619 263 aa12.82□□□□□ -0.36
CTCFL-219ENST00000608720 ZNF2Q9BSG1 426 aaPredicted RBP12.82□□□□□ -0.36
CTCFL-219ENST00000608720 DECR2Q9NUI1 292 aa12.82□□□□□ -0.36
CTCFL-219ENST00000608720 DEDDO75618 318 aa12.81□□□□□ -0.36
CTCFL-219ENST00000608720 NME2P22392 152 aa12.81□□□□□ -0.36
CTCFL-219ENST00000608720 CDX1P47902 265 aaPredicted RBP12.81□□□□□ -0.36
CTCFL-219ENST00000608720 RBP2P50120 134 aa12.81□□□□□ -0.36
CTCFL-219ENST00000608720 H3F3AP84243 136 aa12.81□□□□□ -0.36
CTCFL-219ENST00000608720 RHEBQ15382 184 aa12.81□□□□□ -0.36
CTCFL-219ENST00000608720 TMEM268Q5VZI3 342 aa12.81□□□□□ -0.36
CTCFL-219ENST00000608720 ZNF385CQ66K41 422 aaPredicted RBP12.81□□□□□ -0.36
CTCFL-219ENST00000608720 OPN5Q6U736 354 aa12.81□□□□□ -0.36
CTCFL-219ENST00000608720 GALNTL5Q7Z4T8 443 aa12.81□□□□□ -0.36
CTCFL-219ENST00000608720 FOXRED2Q8IWF2 684 aa12.81□□□□□ -0.36
CTCFL-219ENST00000608720 FBXO17Q96EF6 278 aa12.81□□□□□ -0.36
CTCFL-219ENST00000608720 C14orf144Q96I85 54 aa12.81□□□□□ -0.36
CTCFL-219ENST00000608720 PIGQQ9BRB3 760 aa12.81□□□□□ -0.36
CTCFL-219ENST00000608720 MCTS1Q9ULC4 181 aaKnown RBP12.81□□□□□ -0.36
CTCFL-219ENST00000608720 MRPS17Q9Y2R5 130 aaKnown RBP12.81□□□□□ -0.36
CTCFL-219ENST00000608720 C7orf77A4D0Y5 90 aa12.81□□□□□ -0.36
CTCFL-219ENST00000608720 OR5H15A6NDH6 313 aa12.81□□□□□ -0.36
CTCFL-219ENST00000608720 CRYM-AS1A6NIL9 109 aa12.81□□□□□ -0.36
CTCFL-219ENST00000608720 SLC31A2O15432 143 aa12.81□□□□□ -0.36
CTCFL-219ENST00000608720 OTX1P32242 354 aaPredicted RBP12.81□□□□□ -0.36
CTCFL-219ENST00000608720 RAB4BP61018 213 aa12.81□□□□□ -0.36
CTCFL-219ENST00000608720 RAB1AP62820 205 aa12.81□□□□□ -0.36
CTCFL-219ENST00000608720 REC114Q7Z4M0 266 aa12.81□□□□□ -0.36
CTCFL-219ENST00000608720 C6orf201Q7Z4U5 140 aa12.81□□□□□ -0.36
CTCFL-219ENST00000608720 FAM219AQ8IW50 185 aa12.81□□□□□ -0.36
CTCFL-219ENST00000608720 PRRX2Q99811 253 aa12.81□□□□□ -0.36
CTCFL-219ENST00000608720 PARPBPQ9NWS1 579 aa12.81□□□□□ -0.36
CTCFL-219ENST00000608720 CHCHD2Q9Y6H1 151 aaPredicted RBP12.81□□□□□ -0.36
CTCFL-219ENST00000608720 UNC13CQ8NB66 2214 aa12.8□□□□□ -0.36
CTCFL-219ENST00000608720 IGKV1D-8A0A087WSZ0 117 aa12.8□□□□□ -0.36
CTCFL-219ENST00000608720 A6NLC8 198 aa12.8□□□□□ -0.36
CTCFL-219ENST00000608720 DHRS7CA6NNS2 312 aa12.8□□□□□ -0.36
CTCFL-219ENST00000608720 VAMP5O95183 116 aa12.8□□□□□ -0.36
CTCFL-219ENST00000608720 PNLIPP16233 465 aa12.8□□□□□ -0.36
CTCFL-219ENST00000608720 FCGR2CP31995 323 aa12.8□□□□□ -0.36
CTCFL-219ENST00000608720 CD80P33681 288 aa12.8□□□□□ -0.36
CTCFL-219ENST00000608720 SPEM2Q0P670 501 aa12.8□□□□□ -0.36
CTCFL-219ENST00000608720 RSPO1Q2MKA7 263 aaPredicted RBP12.8□□□□□ -0.36
CTCFL-219ENST00000608720 AWAT1Q58HT5 328 aa12.8□□□□□ -0.36
CTCFL-219ENST00000608720 PYY3Q5JQD4 70 aa12.8□□□□□ -0.36
CTCFL-219ENST00000608720 OR2A2Q6IF42 318 aa12.8□□□□□ -0.36
CTCFL-219ENST00000608720 PIGTQ969N2 578 aa12.8□□□□□ -0.36
CTCFL-219ENST00000608720 SPTSSAQ969W0 71 aa12.8□□□□□ -0.36
CTCFL-219ENST00000608720 NABP1Q96AH0 204 aa12.8□□□□□ -0.36
CTCFL-219ENST00000608720 Q96M66 194 aa12.8□□□□□ -0.36
CTCFL-219ENST00000608720 PLEKHA2Q9HB19 425 aa12.8□□□□□ -0.36
CTCFL-219ENST00000608720 ANXA10Q9UJ72 324 aa12.8□□□□□ -0.36
CTCFL-219ENST00000608720 PADI1Q9ULC6 663 aa12.8□□□□□ -0.36
CTCFL-219ENST00000608720 ASXL3Q9C0F0 2248 aa12.8□□□□□ -0.36
CTCFL-219ENST00000608720 EXPH5Q8NEV8 1989 aa12.8□□□□□ -0.36
CTCFL-219ENST00000608720 M0R135 149 aa12.8□□□□□ -0.36
CTCFL-219ENST00000608720 DHHO43323 396 aa12.8□□□□□ -0.36
CTCFL-219ENST00000608720 CYC1P08574 325 aa12.8□□□□□ -0.36
CTCFL-219ENST00000608720 GABRR1P24046 479 aa12.8□□□□□ -0.36
CTCFL-219ENST00000608720 FAM3AP98173 230 aa12.8□□□□□ -0.36
CTCFL-219ENST00000608720 PHYHD1Q5SRE7 291 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms