RNA–Protein interactions for RNA: ENST00000606752.1

USP6NL-204, Transcript of USP6 N-terminal like, humanhuman

TSL 1 (best)

Gene USP6NL, Length 1,823 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-204ENST00000606752 SERPINE3A8MV23 424 aa18.42■□□□□ 0.54
USP6NL-204ENST00000606752 SSX5O60225 188 aa18.42■□□□□ 0.54
USP6NL-204ENST00000606752 CD3DP04234 171 aa18.42■□□□□ 0.54
USP6NL-204ENST00000606752 FCER2P06734 321 aa18.42■□□□□ 0.54
USP6NL-204ENST00000606752 CD40P25942 277 aa18.42■□□□□ 0.54
USP6NL-204ENST00000606752 RCVRNP35243 200 aa18.42■□□□□ 0.54
USP6NL-204ENST00000606752 GLRXP35754 106 aa18.42■□□□□ 0.54
USP6NL-204ENST00000606752 NKX6-1P78426 367 aaPredicted RBP18.42■□□□□ 0.54
USP6NL-204ENST00000606752 IL24Q13007 206 aa18.42■□□□□ 0.54
USP6NL-204ENST00000606752 OR8G1Q15617 311 aa18.42■□□□□ 0.54
USP6NL-204ENST00000606752 SFRP4Q6FHJ7 346 aaPredicted RBP18.42■□□□□ 0.54
USP6NL-204ENST00000606752 STEAP1BQ6NZ63 245 aa18.42■□□□□ 0.54
USP6NL-204ENST00000606752 PLEKHJ1Q9NW61 149 aa18.42■□□□□ 0.54
USP6NL-204ENST00000606752 MTCH1Q9NZJ7 389 aa18.42■□□□□ 0.54
USP6NL-204ENST00000606752 FZR1Q9UM11 496 aa18.42■□□□□ 0.54
USP6NL-204ENST00000606752 INMT-MINDY4F8WBC2 141 aa18.41■□□□□ 0.54
USP6NL-204ENST00000606752 TRAPPC2LH3BP13 241 aa18.41■□□□□ 0.54
USP6NL-204ENST00000606752 BCL3P20749 454 aa18.41■□□□□ 0.54
USP6NL-204ENST00000606752 MPZP25189 248 aa18.41■□□□□ 0.54
USP6NL-204ENST00000606752 PIGYQ3MUY2 71 aa18.41■□□□□ 0.54
USP6NL-204ENST00000606752 SIGIRRQ6IA17 410 aa18.41■□□□□ 0.54
USP6NL-204ENST00000606752 TMEM108Q6UXF1 575 aa18.41■□□□□ 0.54
USP6NL-204ENST00000606752 OR4C16Q8NGL9 310 aa18.41■□□□□ 0.54
USP6NL-204ENST00000606752 ST8SIA4Q92187 359 aa18.41■□□□□ 0.54
USP6NL-204ENST00000606752 HSF4Q9ULV5 492 aa18.41■□□□□ 0.54
USP6NL-204ENST00000606752 LRP5LA4QPB2 252 aa18.4■□□□□ 0.54
USP6NL-204ENST00000606752 GEMIN2O14893 280 aaKnown RBP18.4■□□□□ 0.54
USP6NL-204ENST00000606752 SYNGR1O43759 233 aa18.4■□□□□ 0.54
USP6NL-204ENST00000606752 CA11O75493 328 aa18.4■□□□□ 0.54
USP6NL-204ENST00000606752 PPP3CBP16298 524 aa18.4■□□□□ 0.54
USP6NL-204ENST00000606752 CHRNB4P30926 498 aa18.4■□□□□ 0.54
USP6NL-204ENST00000606752 ASCL1P50553 236 aa18.4■□□□□ 0.54
USP6NL-204ENST00000606752 RBM11P57052 281 aaKnown RBP18.4■□□□□ 0.54
USP6NL-204ENST00000606752 ARFRP1Q13795 201 aa18.4■□□□□ 0.54
USP6NL-204ENST00000606752 FAAP20Q6NZ36 180 aa18.4■□□□□ 0.54
USP6NL-204ENST00000606752 IFT46Q9NQC8 304 aa18.4■□□□□ 0.54
USP6NL-204ENST00000606752 PKD1L2Q7Z442 2459 aa18.4■□□□□ 0.54
USP6NL-204ENST00000606752 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP18.39■□□□□ 0.54
USP6NL-204ENST00000606752 ZNF736B4DX44 427 aaPredicted RBP18.39■□□□□ 0.54
USP6NL-204ENST00000606752 J3QT63 122 aa18.39■□□□□ 0.54
USP6NL-204ENST00000606752 THBDP07204 575 aa18.39■□□□□ 0.54
USP6NL-204ENST00000606752 ZNF250P15622 560 aa18.39■□□□□ 0.54
USP6NL-204ENST00000606752 FGF12P61328 243 aa18.39■□□□□ 0.54
USP6NL-204ENST00000606752 BTN2A1Q7KYR7 527 aa18.39■□□□□ 0.54
USP6NL-204ENST00000606752 C6orf201Q7Z4U5 140 aa18.39■□□□□ 0.54
USP6NL-204ENST00000606752 GVQW1Q8N7I0 195 aa18.39■□□□□ 0.54
USP6NL-204ENST00000606752 OCSTAMPQ9BR26 566 aa18.39■□□□□ 0.54
USP6NL-204ENST00000606752 NUDT15Q9NV35 164 aa18.39■□□□□ 0.54
USP6NL-204ENST00000606752 COQ3Q9NZJ6 369 aa18.39■□□□□ 0.54
USP6NL-204ENST00000606752 TMEM210A6NLX4 147 aa18.39■□□□□ 0.53
USP6NL-204ENST00000606752 PRSS44E7EML9 344 aa18.39■□□□□ 0.53
USP6NL-204ENST00000606752 ATP6V1G2-DDX39BF2Z307 99 aa18.39■□□□□ 0.53
USP6NL-204ENST00000606752 H0YL77 283 aa18.39■□□□□ 0.53
USP6NL-204ENST00000606752 CD74P04233 296 aa18.39■□□□□ 0.53
USP6NL-204ENST00000606752 PTAFRP25105 342 aa18.39■□□□□ 0.53
USP6NL-204ENST00000606752 CBX5P45973 191 aa18.39■□□□□ 0.53
USP6NL-204ENST00000606752 RPS23P62266 143 aaKnown RBP18.39■□□□□ 0.53
USP6NL-204ENST00000606752 BTG1P62324 171 aa18.39■□□□□ 0.53
USP6NL-204ENST00000606752 NHLRC3Q5JS37 347 aa18.39■□□□□ 0.53
USP6NL-204ENST00000606752 AGAP6Q5VW22 663 aa18.39■□□□□ 0.53
USP6NL-204ENST00000606752 WDR86Q86TI4 376 aa18.39■□□□□ 0.53
USP6NL-204ENST00000606752 WFDC8Q8IUA0 241 aa18.39■□□□□ 0.53
USP6NL-204ENST00000606752 OR4D10Q8NGI6 311 aa18.39■□□□□ 0.53
USP6NL-204ENST00000606752 OR13G1Q8NGZ3 307 aa18.39■□□□□ 0.53
USP6NL-204ENST00000606752 NEURL2Q9BR09 285 aa18.39■□□□□ 0.53
USP6NL-204ENST00000606752 NKIRAS2Q9NYR9 191 aa18.39■□□□□ 0.53
USP6NL-204ENST00000606752 RAB3DO95716 219 aa18.38■□□□□ 0.53
USP6NL-204ENST00000606752 HLA-DMAP28067 261 aa18.38■□□□□ 0.53
USP6NL-204ENST00000606752 CHATP28329 748 aa18.38■□□□□ 0.53
USP6NL-204ENST00000606752 IGFBP7Q16270 282 aa18.38■□□□□ 0.53
USP6NL-204ENST00000606752 CARTPTQ16568 116 aa18.38■□□□□ 0.53
USP6NL-204ENST00000606752 TATDN3Q17R31 274 aa18.38■□□□□ 0.53
USP6NL-204ENST00000606752 MSMPQ1L6U9 139 aa18.38■□□□□ 0.53
USP6NL-204ENST00000606752 FBXL19-AS1Q494R0 122 aa18.38■□□□□ 0.53
USP6NL-204ENST00000606752 NKAPLQ5M9Q1 402 aa18.38■□□□□ 0.53
USP6NL-204ENST00000606752 SPERTQ8NA61 448 aa18.38■□□□□ 0.53
USP6NL-204ENST00000606752 PPP1R14BQ96C90 147 aa18.38■□□□□ 0.53
USP6NL-204ENST00000606752 RADILQ96JH8 1075 aa18.38■□□□□ 0.53
USP6NL-204ENST00000606752 ANAPC10Q9UM13 185 aa18.38■□□□□ 0.53
USP6NL-204ENST00000606752 CADP27708 2225 aa18.38■□□□□ 0.53
USP6NL-204ENST00000606752 TRAV6A0A075B6T7 132 aa18.37■□□□□ 0.53
USP6NL-204ENST00000606752 A0A1B0GWJ7 208 aa18.37■□□□□ 0.53
USP6NL-204ENST00000606752 FAM90A10PA6NDY2 464 aa18.37■□□□□ 0.53
USP6NL-204ENST00000606752 FAM90A18PA6NE21 464 aa18.37■□□□□ 0.53
USP6NL-204ENST00000606752 FAM90A16PA6NEW6 464 aa18.37■□□□□ 0.53
USP6NL-204ENST00000606752 FAM90A20PA6NIJ5 464 aa18.37■□□□□ 0.53
USP6NL-204ENST00000606752 FAM90A8PA6NJQ4 464 aa18.37■□□□□ 0.53
USP6NL-204ENST00000606752 FAM90A7PA6NKC0 464 aa18.37■□□□□ 0.53
USP6NL-204ENST00000606752 FAM90A22PA8MWA6 464 aa18.37■□□□□ 0.53
USP6NL-204ENST00000606752 FAM90A12PA8MX19 464 aa18.37■□□□□ 0.53
USP6NL-204ENST00000606752 FAM90A5PA8MXJ8 464 aa18.37■□□□□ 0.53
USP6NL-204ENST00000606752 FAM90A23PA8MXZ1 464 aa18.37■□□□□ 0.53
USP6NL-204ENST00000606752 F8VVB4 439 aa18.37■□□□□ 0.53
USP6NL-204ENST00000606752 F8VWA3 439 aa18.37■□□□□ 0.53
USP6NL-204ENST00000606752 MLNRO43193 412 aa18.37■□□□□ 0.53
USP6NL-204ENST00000606752 IGHV3-13P01766 116 aa18.37■□□□□ 0.53
USP6NL-204ENST00000606752 FAM90A15PP0C7V4 464 aa18.37■□□□□ 0.53
USP6NL-204ENST00000606752 FAM90A13PP0C7W8 464 aa18.37■□□□□ 0.53
USP6NL-204ENST00000606752 FAM90A14PP0C7W9 464 aa18.37■□□□□ 0.53
USP6NL-204ENST00000606752 FAM90A24PP0C7X0 464 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms