RNA–Protein interactions for RNA: ENST00000605814.1

HMGB1P50-201, Transcript of high mobility group box 1 pseudogene 50, humanhuman

BASIC

Gene HMGB1P50, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P50-201ENST00000605814 IL36AQ9UHA7 158 aa3.56□□□□□ -1.84
HMGB1P50-201ENST00000605814 KLK13Q9UKR3 277 aa3.56□□□□□ -1.84
HMGB1P50-201ENST00000605814 ZNF346Q9UL40 294 aaKnown RBP3.56□□□□□ -1.84
HMGB1P50-201ENST00000605814 SLC7A11Q9UPY5 501 aa3.56□□□□□ -1.84
HMGB1P50-201ENST00000605814 Q9Y3F1 56 aa3.56□□□□□ -1.84
HMGB1P50-201ENST00000605814 WDR45Q9Y484 360 aa3.56□□□□□ -1.84
HMGB1P50-201ENST00000605814 CLDN16Q9Y5I7 305 aa3.56□□□□□ -1.84
HMGB1P50-201ENST00000605814 MRPL42Q9Y6G3 142 aaKnown RBP3.56□□□□□ -1.84
HMGB1P50-201ENST00000605814 KCNE3Q9Y6H6 103 aa3.56□□□□□ -1.84
HMGB1P50-201ENST00000605814 THSD7BQ9C0I4 1608 aa3.55□□□□□ -1.84
HMGB1P50-201ENST00000605814 TRAV30A0A087WSZ9 112 aa3.55□□□□□ -1.84
HMGB1P50-201ENST00000605814 A0A0B4J2E0 115 aa3.55□□□□□ -1.84
HMGB1P50-201ENST00000605814 A0A1B0GX12 115 aa3.55□□□□□ -1.84
HMGB1P50-201ENST00000605814 A0A1W2PS29 197 aa3.55□□□□□ -1.84
HMGB1P50-201ENST00000605814 XKRY2A2RUG3 117 aa3.55□□□□□ -1.84
HMGB1P50-201ENST00000605814 WIPF3A6NGB9 483 aa3.55□□□□□ -1.84
HMGB1P50-201ENST00000605814 OR2AG2A6NM03 316 aa3.55□□□□□ -1.84
HMGB1P50-201ENST00000605814 PRSS47A8MTI9 375 aa3.55□□□□□ -1.84
HMGB1P50-201ENST00000605814 PRR32B1ATL7 298 aa3.55□□□□□ -1.84
HMGB1P50-201ENST00000605814 LEFTY2O00292 366 aa3.55□□□□□ -1.84
HMGB1P50-201ENST00000605814 SAP18O00422 153 aaKnown RBP3.55□□□□□ -1.84
HMGB1P50-201ENST00000605814 RTCAO00442 366 aaKnown RBP3.55□□□□□ -1.84
HMGB1P50-201ENST00000605814 XKRYO14609 159 aa3.55□□□□□ -1.84
HMGB1P50-201ENST00000605814 GEMIN2O14893 280 aaKnown RBP3.55□□□□□ -1.84
HMGB1P50-201ENST00000605814 NDUFS4O43181 175 aa3.55□□□□□ -1.84
HMGB1P50-201ENST00000605814 KCNAB3O43448 404 aa3.55□□□□□ -1.84
HMGB1P50-201ENST00000605814 TCF21O43680 179 aa3.55□□□□□ -1.84
HMGB1P50-201ENST00000605814 FCMRO60667 390 aa3.55□□□□□ -1.84
HMGB1P50-201ENST00000605814 WDR1O75083 606 aa3.55□□□□□ -1.84
HMGB1P50-201ENST00000605814 LDB3O75112 727 aa3.55□□□□□ -1.84
HMGB1P50-201ENST00000605814 ERAL1O75616 437 aaKnown RBP3.55□□□□□ -1.84
HMGB1P50-201ENST00000605814 STC2O76061 302 aa3.55□□□□□ -1.84
HMGB1P50-201ENST00000605814 NTN1O95631 604 aa3.55□□□□□ -1.84
HMGB1P50-201ENST00000605814 SEMA4FO95754 770 aa3.55□□□□□ -1.84
HMGB1P50-201ENST00000605814 IFNA21P01568 189 aa3.55□□□□□ -1.84
HMGB1P50-201ENST00000605814 MAS1P04201 325 aa3.55□□□□□ -1.84
HMGB1P50-201ENST00000605814 REG1AP05451 166 aa3.55□□□□□ -1.84
HMGB1P50-201ENST00000605814 OR4A8P0C604 315 aa3.55□□□□□ -1.84
HMGB1P50-201ENST00000605814 MMP9P14780 707 aa3.55□□□□□ -1.84
HMGB1P50-201ENST00000605814 ZNF43P17038 809 aa3.55□□□□□ -1.84
HMGB1P50-201ENST00000605814 AKR1C4P17516 323 aa3.55□□□□□ -1.84
HMGB1P50-201ENST00000605814 TCN2P20062 427 aa3.55□□□□□ -1.84
HMGB1P50-201ENST00000605814 UCP1P25874 307 aa3.55□□□□□ -1.84
HMGB1P50-201ENST00000605814 HSD11B1P28845 292 aa3.55□□□□□ -1.84
HMGB1P50-201ENST00000605814 BMI1P35226 326 aa3.55□□□□□ -1.84
HMGB1P50-201ENST00000605814 MPLP40238 635 aa3.55□□□□□ -1.84
HMGB1P50-201ENST00000605814 WASP42768 502 aa3.55□□□□□ -1.84
HMGB1P50-201ENST00000605814 ID4P47928 161 aa3.55□□□□□ -1.84
HMGB1P50-201ENST00000605814 LSSP48449 732 aa3.55□□□□□ -1.84
HMGB1P50-201ENST00000605814 SLC37A1P57057 533 aa3.55□□□□□ -1.84
HMGB1P50-201ENST00000605814 UBE2G2P60604 165 aa3.55□□□□□ -1.84
HMGB1P50-201ENST00000605814 UBE2NP61088 152 aaKnown RBP3.55□□□□□ -1.84
HMGB1P50-201ENST00000605814 SNRPD1P62314 119 aaKnown RBP3.55□□□□□ -1.84
HMGB1P50-201ENST00000605814 RPS4XP62701 263 aaKnown RBP3.55□□□□□ -1.84
HMGB1P50-201ENST00000605814 ZFP36L1Q07352 338 aaKnown RBP3.55□□□□□ -1.84
HMGB1P50-201ENST00000605814 EIF3IQ13347 325 aaKnown RBP3.55□□□□□ -1.84
HMGB1P50-201ENST00000605814 TRA2AQ13595 282 aaKnown RBP eCLIP3.55□□□□□ -1.84
HMGB1P50-201ENST00000605814 FZD2Q14332 565 aa3.55□□□□□ -1.84
HMGB1P50-201ENST00000605814 ANKRD55Q3KP44 614 aa3.55□□□□□ -1.84
HMGB1P50-201ENST00000605814 PRAMEF14Q5SWL7 426 aa3.55□□□□□ -1.84
HMGB1P50-201ENST00000605814 CST9Q5W186 159 aa3.55□□□□□ -1.84
HMGB1P50-201ENST00000605814 TMEM225Q6GV28 225 aa3.55□□□□□ -1.84
HMGB1P50-201ENST00000605814 ASPHD2Q6ICH7 369 aa3.55□□□□□ -1.84
HMGB1P50-201ENST00000605814 MFSD12Q6NUT3 480 aa3.55□□□□□ -1.84
HMGB1P50-201ENST00000605814 SLC48A1Q6P1K1 146 aa3.55□□□□□ -1.84
HMGB1P50-201ENST00000605814 ZNF343Q6P1L6 599 aa3.55□□□□□ -1.84
HMGB1P50-201ENST00000605814 CLEC2AQ6UVW9 174 aa3.55□□□□□ -1.84
HMGB1P50-201ENST00000605814 PET117Q6UWS5 81 aa3.55□□□□□ -1.84
HMGB1P50-201ENST00000605814 TIPARPQ7Z3E1 657 aaKnown RBP3.55□□□□□ -1.84
HMGB1P50-201ENST00000605814 FAM219AQ8IW50 185 aa3.55□□□□□ -1.84
HMGB1P50-201ENST00000605814 FOXRED2Q8IWF2 684 aa3.55□□□□□ -1.84
HMGB1P50-201ENST00000605814 ZNF100Q8IYN0 542 aa3.55□□□□□ -1.84
HMGB1P50-201ENST00000605814 ZNF679Q8IYX0 411 aa3.55□□□□□ -1.84
HMGB1P50-201ENST00000605814 FAM185AQ8N0U4 392 aa3.55□□□□□ -1.84
HMGB1P50-201ENST00000605814 PNKDQ8N490 385 aa3.55□□□□□ -1.84
HMGB1P50-201ENST00000605814 ZNF676Q8N7Q3 588 aa3.55□□□□□ -1.84
HMGB1P50-201ENST00000605814 ZNF615Q8N8J6 731 aa3.55□□□□□ -1.84
HMGB1P50-201ENST00000605814 AMER3Q8N944 861 aa3.55□□□□□ -1.84
HMGB1P50-201ENST00000605814 LRRC75AQ8NAA5 344 aa3.55□□□□□ -1.84
HMGB1P50-201ENST00000605814 ZNF740Q8NDX6 193 aa3.55□□□□□ -1.84
HMGB1P50-201ENST00000605814 OR4D6Q8NGJ1 314 aa3.55□□□□□ -1.84
HMGB1P50-201ENST00000605814 OR6K2Q8NGY2 324 aa3.55□□□□□ -1.84
HMGB1P50-201ENST00000605814 OR2V1Q8NHB1 315 aa3.55□□□□□ -1.84
HMGB1P50-201ENST00000605814 PFN4Q8NHR9 129 aa3.55□□□□□ -1.84
HMGB1P50-201ENST00000605814 MARCH1Q8TCQ1 289 aa3.55□□□□□ -1.84
HMGB1P50-201ENST00000605814 CASTOR1Q8WTX7 329 aa3.55□□□□□ -1.84
HMGB1P50-201ENST00000605814 PTPMT1Q8WUK0 201 aaPredicted RBP3.55□□□□□ -1.84
HMGB1P50-201ENST00000605814 MBD3L1Q8WWY6 194 aa3.55□□□□□ -1.84
HMGB1P50-201ENST00000605814 OIT3Q8WWZ8 545 aa3.55□□□□□ -1.84
HMGB1P50-201ENST00000605814 KLK6Q92876 244 aa3.55□□□□□ -1.84
HMGB1P50-201ENST00000605814 TNFRSF14Q92956 283 aa3.55□□□□□ -1.84
HMGB1P50-201ENST00000605814 GLYATL1Q969I3 302 aa3.55□□□□□ -1.84
HMGB1P50-201ENST00000605814 GNPNAT1Q96EK6 184 aaPredicted RBP3.55□□□□□ -1.84
HMGB1P50-201ENST00000605814 CNRIP1Q96F85 164 aaPredicted RBP3.55□□□□□ -1.84
HMGB1P50-201ENST00000605814 SLC35E1Q96K37 410 aa3.55□□□□□ -1.84
HMGB1P50-201ENST00000605814 ZNF514Q96K75 400 aaPredicted RBP3.55□□□□□ -1.84
HMGB1P50-201ENST00000605814 BBC3Q96PG8 261 aaPredicted RBP3.55□□□□□ -1.84
HMGB1P50-201ENST00000605814 ALKBH3Q96Q83 286 aaPredicted RBP3.55□□□□□ -1.84
HMGB1P50-201ENST00000605814 OR8B4Q96RC9 309 aa3.55□□□□□ -1.84
HMGB1P50-201ENST00000605814 TP53RKQ96S44 253 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms