RNA–Protein interactions for RNA: ENST00000600552.5

SHKBP1-223, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-223ENST00000600552 PRB2P02812 416 aaPredicted RBP14.27□□□□□ -0.13
SHKBP1-223ENST00000600552 ARG1P05089 322 aa14.27□□□□□ -0.13
SHKBP1-223ENST00000600552 KIR2DS4P43632 304 aa14.27□□□□□ -0.13
SHKBP1-223ENST00000600552 EFNB2P52799 333 aa14.27□□□□□ -0.13
SHKBP1-223ENST00000600552 EDDM3BP56851 147 aa14.27□□□□□ -0.13
SHKBP1-223ENST00000600552 DYNC1I2Q13409 638 aaKnown RBP14.27□□□□□ -0.13
SHKBP1-223ENST00000600552 FAM189A2Q15884 450 aa14.27□□□□□ -0.13
SHKBP1-223ENST00000600552 DNAL1Q4LDG9 190 aa14.27□□□□□ -0.13
SHKBP1-223ENST00000600552 ELMOD2Q8IZ81 293 aa14.27□□□□□ -0.13
SHKBP1-223ENST00000600552 YIPF7Q8N8F6 280 aa14.27□□□□□ -0.13
SHKBP1-223ENST00000600552 OR14K1Q8NGZ2 314 aa14.27□□□□□ -0.13
SHKBP1-223ENST00000600552 OR5K1Q8NHB7 308 aa14.27□□□□□ -0.13
SHKBP1-223ENST00000600552 PRRG3Q9BZD7 231 aa14.27□□□□□ -0.13
SHKBP1-223ENST00000600552 NPFFR1Q9GZQ6 430 aa14.27□□□□□ -0.13
SHKBP1-223ENST00000600552 MEGF9Q9H1U4 602 aa14.27□□□□□ -0.13
SHKBP1-223ENST00000600552 RAB18Q9NP72 206 aa14.27□□□□□ -0.13
SHKBP1-223ENST00000600552 KRT84Q9NSB2 600 aa14.27□□□□□ -0.13
SHKBP1-223ENST00000600552 POMPQ9Y244 141 aa14.27□□□□□ -0.13
SHKBP1-223ENST00000600552 A0A1B0GTI1 187 aa14.26□□□□□ -0.13
SHKBP1-223ENST00000600552 TCRBV3S1A0A5B6 114 aa14.26□□□□□ -0.13
SHKBP1-223ENST00000600552 APOL3O95236 402 aa14.26□□□□□ -0.13
SHKBP1-223ENST00000600552 TK1P04183 234 aa14.26□□□□□ -0.13
SHKBP1-223ENST00000600552 HOXB6P17509 224 aaKnown RBP14.26□□□□□ -0.13
SHKBP1-223ENST00000600552 COL10A1Q03692 680 aa14.26□□□□□ -0.13
SHKBP1-223ENST00000600552 HABP2Q14520 560 aaPredicted RBP14.26□□□□□ -0.13
SHKBP1-223ENST00000600552 ARSJQ5FYB0 599 aaPredicted RBP14.26□□□□□ -0.13
SHKBP1-223ENST00000600552 KRT74Q7RTS7 529 aa14.26□□□□□ -0.13
SHKBP1-223ENST00000600552 TMEM219Q86XT9 240 aa14.26□□□□□ -0.13
SHKBP1-223ENST00000600552 CALHM1Q8IU99 346 aa14.26□□□□□ -0.13
SHKBP1-223ENST00000600552 DYNAPQ8N1N2 210 aa14.26□□□□□ -0.13
SHKBP1-223ENST00000600552 OR5M11Q96RB7 305 aa14.26□□□□□ -0.13
SHKBP1-223ENST00000600552 NRIP2Q9BQI9 281 aa14.26□□□□□ -0.13
SHKBP1-223ENST00000600552 PLEKHA1Q9HB21 404 aa14.26□□□□□ -0.13
SHKBP1-223ENST00000600552 ADGRL4Q9HBW9 690 aa14.26□□□□□ -0.13
SHKBP1-223ENST00000600552 ABCB10Q9NRK6 738 aa14.26□□□□□ -0.13
SHKBP1-223ENST00000600552 MRM2Q9UI43 246 aaKnown RBP14.26□□□□□ -0.13
SHKBP1-223ENST00000600552 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP14.26□□□□□ -0.13
SHKBP1-223ENST00000600552 SLC7A11Q9UPY5 501 aa14.26□□□□□ -0.13
SHKBP1-223ENST00000600552 SNX5Q9Y5X3 404 aa14.26□□□□□ -0.13
SHKBP1-223ENST00000600552 PRKDCP78527 4128 aaKnown RBP14.26□□□□□ -0.13
SHKBP1-223ENST00000600552 DLGAP1O14490 977 aa14.25□□□□□ -0.13
SHKBP1-223ENST00000600552 SRSF10O75494 262 aaKnown RBP14.25□□□□□ -0.13
SHKBP1-223ENST00000600552 KRT8P05787 483 aa14.25□□□□□ -0.13
SHKBP1-223ENST00000600552 EPHA2P29317 976 aa14.25□□□□□ -0.13
SHKBP1-223ENST00000600552 EDDM3AQ14507 147 aa14.25□□□□□ -0.13
SHKBP1-223ENST00000600552 FAHD1Q6P587 224 aa14.25□□□□□ -0.13
SHKBP1-223ENST00000600552 C11orf42Q8N5U0 333 aa14.25□□□□□ -0.13
SHKBP1-223ENST00000600552 TMEM163Q8TC26 289 aa14.25□□□□□ -0.13
SHKBP1-223ENST00000600552 DNAJC9Q8WXX5 260 aa14.25□□□□□ -0.13
SHKBP1-223ENST00000600552 SLAMF9Q96A28 289 aa14.25□□□□□ -0.13
SHKBP1-223ENST00000600552 NRBF2Q96F24 287 aa14.25□□□□□ -0.13
SHKBP1-223ENST00000600552 ADI1Q9BV57 179 aa14.25□□□□□ -0.13
SHKBP1-223ENST00000600552 MOB1AQ9H8S9 216 aa14.25□□□□□ -0.13
SHKBP1-223ENST00000600552 V9GYS6 101 aa14.25□□□□□ -0.13
SHKBP1-223ENST00000600552 PEX14O75381 377 aa14.24□□□□□ -0.13
SHKBP1-223ENST00000600552 DNAJC8O75937 253 aaPredicted RBP14.24□□□□□ -0.13
SHKBP1-223ENST00000600552 SSX2Q16385 188 aa14.24□□□□□ -0.13
SHKBP1-223ENST00000600552 TMEM42Q69YG0 159 aa14.24□□□□□ -0.13
SHKBP1-223ENST00000600552 GDPD3Q7L5L3 318 aa14.24□□□□□ -0.13
SHKBP1-223ENST00000600552 SSX6Q7RTT6 188 aa14.24□□□□□ -0.13
SHKBP1-223ENST00000600552 PIFOQ8TCI5 191 aa14.24□□□□□ -0.13
SHKBP1-223ENST00000600552 ITFG2Q969R8 447 aa14.24□□□□□ -0.13
SHKBP1-223ENST00000600552 CADM1Q9BY67 442 aaKnown RBP14.24□□□□□ -0.13
SHKBP1-223ENST00000600552 CLN6Q9NWW5 311 aa14.24□□□□□ -0.13
SHKBP1-223ENST00000600552 F8VVB4 439 aa14.23□□□□□ -0.13
SHKBP1-223ENST00000600552 F8VWA3 439 aa14.23□□□□□ -0.13
SHKBP1-223ENST00000600552 G3V2T6 193 aa14.23□□□□□ -0.13
SHKBP1-223ENST00000600552 SYT7O43581 403 aa14.23□□□□□ -0.13
SHKBP1-223ENST00000600552 NOS1APO75052 506 aaPredicted RBP14.23□□□□□ -0.13
SHKBP1-223ENST00000600552 CALCBP10092 127 aa14.23□□□□□ -0.13
SHKBP1-223ENST00000600552 SNU13P55769 128 aaKnown RBP14.23□□□□□ -0.13
SHKBP1-223ENST00000600552 AADACL4Q5VUY2 407 aa14.23□□□□□ -0.13
SHKBP1-223ENST00000600552 SLX4IPQ5VYV7 408 aa14.23□□□□□ -0.13
SHKBP1-223ENST00000600552 NXNL2Q5VZ03 156 aa14.23□□□□□ -0.13
SHKBP1-223ENST00000600552 CRIP3Q6Q6R5 217 aa14.23□□□□□ -0.13
SHKBP1-223ENST00000600552 EGFL6Q8IUX8 553 aa14.23□□□□□ -0.13
SHKBP1-223ENST00000600552 OR10H4Q8NGA5 316 aa14.23□□□□□ -0.13
SHKBP1-223ENST00000600552 OR13D1Q8NGV5 346 aa14.23□□□□□ -0.13
SHKBP1-223ENST00000600552 UTP4Q969X6 686 aaKnown RBP14.23□□□□□ -0.13
SHKBP1-223ENST00000600552 RANBP3Q9H6Z4 567 aaPredicted RBP14.23□□□□□ -0.13
SHKBP1-223ENST00000600552 HILPDAQ9Y5L2 63 aa14.23□□□□□ -0.13
SHKBP1-223ENST00000600552 PLXNB1O43157 2135 aa14.23□□□□□ -0.13
SHKBP1-223ENST00000600552 K7N7A8 449 aa14.22□□□□□ -0.13
SHKBP1-223ENST00000600552 CHRM2P08172 466 aa14.22□□□□□ -0.13
SHKBP1-223ENST00000600552 ZNF728P0DKX0 622 aa14.22□□□□□ -0.13
SHKBP1-223ENST00000600552 CD28P10747 220 aa14.22□□□□□ -0.13
SHKBP1-223ENST00000600552 JUNBP17275 347 aaPredicted RBP14.22□□□□□ -0.13
SHKBP1-223ENST00000600552 ATP6V1E1P36543 226 aa14.22□□□□□ -0.13
SHKBP1-223ENST00000600552 AANATQ16613 207 aa14.22□□□□□ -0.13
SHKBP1-223ENST00000600552 C11orf88Q6PI97 169 aa14.22□□□□□ -0.13
SHKBP1-223ENST00000600552 AMIGO2Q86SJ2 522 aa14.22□□□□□ -0.13
SHKBP1-223ENST00000600552 GID4Q8IVV7 300 aa14.22□□□□□ -0.13
SHKBP1-223ENST00000600552 TPRX1Q8N7U7 411 aa14.22□□□□□ -0.13
SHKBP1-223ENST00000600552 SLC7A6OSQ96CW6 309 aaPredicted RBP14.22□□□□□ -0.13
SHKBP1-223ENST00000600552 CEP19Q96LK0 163 aa14.22□□□□□ -0.13
SHKBP1-223ENST00000600552 MNTQ99583 582 aa14.22□□□□□ -0.13
SHKBP1-223ENST00000600552 CHST6Q9GZX3 395 aa14.22□□□□□ -0.13
SHKBP1-223ENST00000600552 HES4Q9HCC6 221 aa14.22□□□□□ -0.13
SHKBP1-223ENST00000600552 MTCH1Q9NZJ7 389 aa14.22□□□□□ -0.13
SHKBP1-223ENST00000600552 ZAR1LA6NP61 321 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms