RNA–Protein interactions for RNA: ENST00000600320.5

SHKBP1-222, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-222ENST00000600320 CSMD1Q96PZ7 3565 aa16.78■□□□□ 0.28
SHKBP1-222ENST00000600320 LGALS8O00214 317 aa16.77■□□□□ 0.28
SHKBP1-222ENST00000600320 ACAA1P09110 424 aaPredicted RBP16.77■□□□□ 0.28
SHKBP1-222ENST00000600320 CLEC2LP0C7M8 214 aa16.77■□□□□ 0.28
SHKBP1-222ENST00000600320 BCL3P20749 454 aa16.77■□□□□ 0.28
SHKBP1-222ENST00000600320 GLRA1P23415 457 aa16.77■□□□□ 0.28
SHKBP1-222ENST00000600320 NR2C2APQ86WQ0 139 aa16.77■□□□□ 0.28
SHKBP1-222ENST00000600320 CDH26Q8IXH8 852 aa16.77■□□□□ 0.28
SHKBP1-222ENST00000600320 MKXQ8IYA7 352 aa16.77■□□□□ 0.28
SHKBP1-222ENST00000600320 ZSCAN4Q8NAM6 433 aaPredicted RBP16.77■□□□□ 0.28
SHKBP1-222ENST00000600320 OR51F2Q8NH61 342 aa16.77■□□□□ 0.28
SHKBP1-222ENST00000600320 CPNE2Q96FN4 548 aaPredicted RBP16.77■□□□□ 0.28
SHKBP1-222ENST00000600320 TIMD4Q96H15 378 aa16.77■□□□□ 0.28
SHKBP1-222ENST00000600320 CEP19Q96LK0 163 aa16.77■□□□□ 0.28
SHKBP1-222ENST00000600320 FAM192AQ9GZU8 254 aa16.77■□□□□ 0.28
SHKBP1-222ENST00000600320 NARFLQ9H6Q4 476 aa16.77■□□□□ 0.28
SHKBP1-222ENST00000600320 TMEM165Q9HC07 324 aa16.77■□□□□ 0.28
SHKBP1-222ENST00000600320 A0A096LNT2 108 aa16.76■□□□□ 0.27
SHKBP1-222ENST00000600320 IGHV4-61A0A0C4DH41 118 aa16.76■□□□□ 0.27
SHKBP1-222ENST00000600320 A0A0G2JK05 382 aa16.76■□□□□ 0.27
SHKBP1-222ENST00000600320 OOEPA6NGQ2 149 aa16.76■□□□□ 0.27
SHKBP1-222ENST00000600320 KDM4BO94953 1096 aa16.76■□□□□ 0.27
SHKBP1-222ENST00000600320 GABARAPO95166 117 aa16.76■□□□□ 0.27
SHKBP1-222ENST00000600320 CDRT1O95170 752 aa16.76■□□□□ 0.27
SHKBP1-222ENST00000600320 SFTPBP07988 381 aa16.76■□□□□ 0.27
SHKBP1-222ENST00000600320 CALCBP10092 127 aa16.76■□□□□ 0.27
SHKBP1-222ENST00000600320 SDC2P34741 201 aa16.76■□□□□ 0.27
SHKBP1-222ENST00000600320 PTGFRP43088 359 aa16.76■□□□□ 0.27
SHKBP1-222ENST00000600320 MTNR1BP49286 362 aa16.76■□□□□ 0.27
SHKBP1-222ENST00000600320 NCS1P62166 190 aa16.76■□□□□ 0.27
SHKBP1-222ENST00000600320 C1orf100Q5SVJ3 147 aa16.76■□□□□ 0.27
SHKBP1-222ENST00000600320 TEX36Q5VZQ5 186 aa16.76■□□□□ 0.27
SHKBP1-222ENST00000600320 GLT8D1Q68CQ7 371 aa16.76■□□□□ 0.27
SHKBP1-222ENST00000600320 ASCL4Q6XD76 172 aa16.76■□□□□ 0.27
SHKBP1-222ENST00000600320 PEG10Q86TG7 708 aaKnown RBP16.76■□□□□ 0.27
SHKBP1-222ENST00000600320 LRRC28Q86X40 367 aaPredicted RBP16.76■□□□□ 0.27
SHKBP1-222ENST00000600320 SAXO1Q8IYX7 474 aa16.76■□□□□ 0.27
SHKBP1-222ENST00000600320 PXT1Q8NFP0 134 aa16.76■□□□□ 0.27
SHKBP1-222ENST00000600320 HES4Q9HCC6 221 aa16.76■□□□□ 0.27
SHKBP1-222ENST00000600320 SMURF1Q9HCE7 757 aa16.76■□□□□ 0.27
SHKBP1-222ENST00000600320 RBFOX1Q9NWB1 397 aaKnown RBP16.76■□□□□ 0.27
SHKBP1-222ENST00000600320 ING4Q9UNL4 249 aa16.76■□□□□ 0.27
SHKBP1-222ENST00000600320 MRPS28Q9Y2Q9 187 aaKnown RBP16.76■□□□□ 0.27
SHKBP1-222ENST00000600320 CCDC168Q8NDH2 2452 aa16.76■□□□□ 0.27
SHKBP1-222ENST00000600320 ISPDA4D126 451 aa16.75■□□□□ 0.27
SHKBP1-222ENST00000600320 CYB5AP00167 134 aa16.75■□□□□ 0.27
SHKBP1-222ENST00000600320 TFF1P04155 84 aa16.75■□□□□ 0.27
SHKBP1-222ENST00000600320 SLC25A16P16260 332 aa16.75■□□□□ 0.27
SHKBP1-222ENST00000600320 RAB3BP20337 219 aa16.75■□□□□ 0.27
SHKBP1-222ENST00000600320 CTF1Q16619 201 aa16.75■□□□□ 0.27
SHKBP1-222ENST00000600320 ZNF404Q494X3 552 aa16.75■□□□□ 0.27
SHKBP1-222ENST00000600320 ACP7Q6ZNF0 438 aa16.75■□□□□ 0.27
SHKBP1-222ENST00000600320 FAM90A1Q86YD7 464 aa16.75■□□□□ 0.27
SHKBP1-222ENST00000600320 CLVS1Q8IUQ0 354 aaPredicted RBP16.75■□□□□ 0.27
SHKBP1-222ENST00000600320 PNLDC1Q8NA58 520 aaKnown RBP16.75■□□□□ 0.27
SHKBP1-222ENST00000600320 OR5T2Q8NGG2 359 aa16.75■□□□□ 0.27
SHKBP1-222ENST00000600320 OR10K1Q8NGX5 313 aa16.75■□□□□ 0.27
SHKBP1-222ENST00000600320 C1orf147Q96MC9 270 aaPredicted RBP16.75■□□□□ 0.27
SHKBP1-222ENST00000600320 TMEM246Q9BRR3 403 aa16.75■□□□□ 0.27
SHKBP1-222ENST00000600320 UQCC2Q9BRT2 126 aa16.75■□□□□ 0.27
SHKBP1-222ENST00000600320 IL36RNQ9UBH0 155 aa16.75■□□□□ 0.27
SHKBP1-222ENST00000600320 V9GY05 133 aa16.75■□□□□ 0.27
SHKBP1-222ENST00000600320 RNF223E7ERA6 249 aa16.74■□□□□ 0.27
SHKBP1-222ENST00000600320 TRAPPC2LH3BP13 241 aa16.74■□□□□ 0.27
SHKBP1-222ENST00000600320 PDCD5O14737 125 aa16.74■□□□□ 0.27
SHKBP1-222ENST00000600320 NXPH2O95156 264 aa16.74■□□□□ 0.27
SHKBP1-222ENST00000600320 FSTL3O95633 263 aa16.74■□□□□ 0.27
SHKBP1-222ENST00000600320 AMY2BP19961 511 aa16.74■□□□□ 0.27
SHKBP1-222ENST00000600320 MDH2P40926 338 aaKnown RBP16.74■□□□□ 0.27
SHKBP1-222ENST00000600320 CAV3P56539 151 aa16.74■□□□□ 0.27
SHKBP1-222ENST00000600320 VBP1P61758 197 aa16.74■□□□□ 0.27
SHKBP1-222ENST00000600320 MXD1Q05195 221 aa16.74■□□□□ 0.27
SHKBP1-222ENST00000600320 FAM166AQ6J272 317 aa16.74■□□□□ 0.27
SHKBP1-222ENST00000600320 GLIPR1L1Q6UWM5 242 aa16.74■□□□□ 0.27
SHKBP1-222ENST00000600320 CLDND2Q8NHS1 167 aa16.74■□□□□ 0.27
SHKBP1-222ENST00000600320 SLC25A28Q96A46 364 aa16.74■□□□□ 0.27
SHKBP1-222ENST00000600320 FOXRED1Q96CU9 486 aaPredicted RBP16.74■□□□□ 0.27
SHKBP1-222ENST00000600320 NLKQ9UBE8 527 aa16.74■□□□□ 0.27
SHKBP1-222ENST00000600320 DNAJB11Q9UBS4 358 aa16.74■□□□□ 0.27
SHKBP1-222ENST00000600320 TRAV38-1A0A0B4J264 116 aa16.73■□□□□ 0.27
SHKBP1-222ENST00000600320 A0A1W2PP11 408 aa16.73■□□□□ 0.27
SHKBP1-222ENST00000600320 TNFRSF13BO14836 293 aaPredicted RBP16.73■□□□□ 0.27
SHKBP1-222ENST00000600320 SLC22A1O15245 554 aa16.73■□□□□ 0.27
SHKBP1-222ENST00000600320 GYPAP02724 150 aa16.73■□□□□ 0.27
SHKBP1-222ENST00000600320 BLMHQ13867 455 aa16.73■□□□□ 0.27
SHKBP1-222ENST00000600320 TMEM155Q4W5P6 130 aa16.73■□□□□ 0.27
SHKBP1-222ENST00000600320 HES5Q5TA89 166 aa16.73■□□□□ 0.27
SHKBP1-222ENST00000600320 AWAT2Q6E213 333 aa16.73■□□□□ 0.27
SHKBP1-222ENST00000600320 LYPD2Q6UXB3 125 aa16.73■□□□□ 0.27
SHKBP1-222ENST00000600320 EMG1Q92979 244 aaKnown RBP16.73■□□□□ 0.27
SHKBP1-222ENST00000600320 REG4Q9BYZ8 158 aa16.73■□□□□ 0.27
SHKBP1-222ENST00000600320 KCNK15Q9H427 330 aa16.73■□□□□ 0.27
SHKBP1-222ENST00000600320 ELL3Q9HB65 397 aaPredicted RBP16.73■□□□□ 0.27
SHKBP1-222ENST00000600320 RASL12Q9NYN1 266 aa16.73■□□□□ 0.27
SHKBP1-222ENST00000600320 CEACAM18A8MTB9 384 aa16.72■□□□□ 0.27
SHKBP1-222ENST00000600320 SLC17A2O00624 439 aa16.72■□□□□ 0.27
SHKBP1-222ENST00000600320 PSG2P11465 335 aa16.72■□□□□ 0.27
SHKBP1-222ENST00000600320 MUC1P15941 1255 aaPredicted RBP16.72■□□□□ 0.27
SHKBP1-222ENST00000600320 HTR2CP28335 458 aa16.72■□□□□ 0.27
SHKBP1-222ENST00000600320 SNU13P55769 128 aaKnown RBP16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms