RNA–Protein interactions for RNA: ENST00000600055.1

LIG1-219, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 602 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-219ENST00000600055 MYL12BO14950 172 aa12.61□□□□□ -0.39
LIG1-219ENST00000600055 NXPH2O95156 264 aa12.61□□□□□ -0.39
LIG1-219ENST00000600055 PRKACBP22694 351 aa12.61□□□□□ -0.39
LIG1-219ENST00000600055 POU3F4P49335 361 aa12.61□□□□□ -0.39
LIG1-219ENST00000600055 CEBPDP49716 269 aaPredicted RBP12.61□□□□□ -0.39
LIG1-219ENST00000600055 RBP2P50120 134 aa12.61□□□□□ -0.39
LIG1-219ENST00000600055 ATP1B3P54709 279 aa12.61□□□□□ -0.39
LIG1-219ENST00000600055 MTCP1P56278 107 aa12.61□□□□□ -0.39
LIG1-219ENST00000600055 ERVK11-1P61568 191 aa12.61□□□□□ -0.39
LIG1-219ENST00000600055 DGUOKQ16854 277 aa12.61□□□□□ -0.39
LIG1-219ENST00000600055 DMKNQ6E0U4 476 aaPredicted RBP12.61□□□□□ -0.39
LIG1-219ENST00000600055 BTNL3Q6UXE8 466 aa12.61□□□□□ -0.39
LIG1-219ENST00000600055 ZNF788Q6ZQV5 615 aa12.61□□□□□ -0.39
LIG1-219ENST00000600055 SLC25A26Q70HW3 274 aa12.61□□□□□ -0.39
LIG1-219ENST00000600055 BTN2A1Q7KYR7 527 aa12.61□□□□□ -0.39
LIG1-219ENST00000600055 C1QL2Q7Z5L3 287 aa12.61□□□□□ -0.39
LIG1-219ENST00000600055 PARP16Q8N5Y8 322 aa12.61□□□□□ -0.39
LIG1-219ENST00000600055 CD177Q8N6Q3 437 aa12.61□□□□□ -0.39
LIG1-219ENST00000600055 NANOGP1Q8N7R0 232 aa12.61□□□□□ -0.39
LIG1-219ENST00000600055 DNAAF1Q8NEP3 725 aa12.61□□□□□ -0.39
LIG1-219ENST00000600055 GHSRQ92847 366 aa12.61□□□□□ -0.39
LIG1-219ENST00000600055 SMIM19Q96E16 107 aa12.61□□□□□ -0.39
LIG1-219ENST00000600055 CNBD2Q96M20 576 aa12.61□□□□□ -0.39
LIG1-219ENST00000600055 OPALINQ96PE5 141 aa12.61□□□□□ -0.39
LIG1-219ENST00000600055 HES4Q9HCC6 221 aa12.61□□□□□ -0.39
LIG1-219ENST00000600055 SCN3BQ9NY72 215 aa12.61□□□□□ -0.39
LIG1-219ENST00000600055 RASL12Q9NYN1 266 aa12.61□□□□□ -0.39
LIG1-219ENST00000600055 ZNF222Q9UK12 451 aa12.61□□□□□ -0.39
LIG1-219ENST00000600055 NKX6-3A6NJ46 265 aa12.6□□□□□ -0.39
LIG1-219ENST00000600055 RFPL4AA6NLU0 287 aa12.6□□□□□ -0.39
LIG1-219ENST00000600055 RFPL4AL1F8VTS6 287 aa12.6□□□□□ -0.39
LIG1-219ENST00000600055 SIGLEC5O15389 551 aa12.6□□□□□ -0.39
LIG1-219ENST00000600055 SPRY1O43609 319 aaPredicted RBP12.6□□□□□ -0.39
LIG1-219ENST00000600055 NDUFB3O43676 98 aa12.6□□□□□ -0.39
LIG1-219ENST00000600055 IFNA2P01563 188 aa12.6□□□□□ -0.39
LIG1-219ENST00000600055 ACAA1P09110 424 aaPredicted RBP12.6□□□□□ -0.39
LIG1-219ENST00000600055 OCM2P0CE71 109 aa12.6□□□□□ -0.39
LIG1-219ENST00000600055 OCMP0CE72 109 aaPredicted RBP12.6□□□□□ -0.39
LIG1-219ENST00000600055 WNT4P56705 351 aa12.6□□□□□ -0.39
LIG1-219ENST00000600055 SLC35A2P78381 396 aa12.6□□□□□ -0.39
LIG1-219ENST00000600055 SMIM21Q3B7S5 101 aa12.6□□□□□ -0.39
LIG1-219ENST00000600055 ASPHD2Q6ICH7 369 aa12.6□□□□□ -0.39
LIG1-219ENST00000600055 CRIP3Q6Q6R5 217 aa12.6□□□□□ -0.39
LIG1-219ENST00000600055 LHFPL2Q6ZUX7 228 aa12.6□□□□□ -0.39
LIG1-219ENST00000600055 SERPINA12Q8IW75 414 aa12.6□□□□□ -0.39
LIG1-219ENST00000600055 GPR148Q8TDV2 347 aa12.6□□□□□ -0.39
LIG1-219ENST00000600055 MYDGFQ969H8 173 aa12.6□□□□□ -0.39
LIG1-219ENST00000600055 SPSB1Q96BD6 273 aa12.6□□□□□ -0.39
LIG1-219ENST00000600055 ORAI1Q96D31 301 aa12.6□□□□□ -0.39
LIG1-219ENST00000600055 PGLYRP3Q96LB9 341 aa12.6□□□□□ -0.39
LIG1-219ENST00000600055 MRI1Q9BV20 369 aa12.6□□□□□ -0.39
LIG1-219ENST00000600055 DNTTIP1Q9H147 329 aa12.6□□□□□ -0.39
LIG1-219ENST00000600055 TAS2R4Q9NYW5 299 aa12.6□□□□□ -0.39
LIG1-219ENST00000600055 METRNQ9UJH8 293 aa12.6□□□□□ -0.39
LIG1-219ENST00000600055 ERGIC3Q9Y282 383 aa12.6□□□□□ -0.39
LIG1-219ENST00000600055 ZNF281Q9Y2X9 895 aa12.6□□□□□ -0.39
LIG1-219ENST00000600055 MAB21L2Q9Y586 359 aa12.6□□□□□ -0.39
LIG1-219ENST00000600055 NAV3Q8IVL0 2385 aa12.6□□□□□ -0.39
LIG1-219ENST00000600055 ENSAO43768 121 aaKnown RBP12.59□□□□□ -0.39
LIG1-219ENST00000600055 FSHBP01225 129 aa12.59□□□□□ -0.39
LIG1-219ENST00000600055 MT-ND2P03891 347 aa12.59□□□□□ -0.39
LIG1-219ENST00000600055 RPSAP08865 295 aaKnown RBP12.59□□□□□ -0.39
LIG1-219ENST00000600055 CALCBP10092 127 aa12.59□□□□□ -0.39
LIG1-219ENST00000600055 IL13RA1P78552 427 aa12.59□□□□□ -0.39
LIG1-219ENST00000600055 SRSF2Q01130 221 aaKnown RBP12.59□□□□□ -0.39
LIG1-219ENST00000600055 KRTAP21-3Q3LHN1 58 aa12.59□□□□□ -0.39
LIG1-219ENST00000600055 KLF17Q5JT82 389 aaPredicted RBP12.59□□□□□ -0.39
LIG1-219ENST00000600055 CD276Q5ZPR3 534 aa12.59□□□□□ -0.39
LIG1-219ENST00000600055 ZNRF1Q8ND25 227 aa12.59□□□□□ -0.39
LIG1-219ENST00000600055 OR51A2Q8NGJ7 313 aa12.59□□□□□ -0.39
LIG1-219ENST00000600055 OR5D18Q8NGL1 313 aa12.59□□□□□ -0.39
LIG1-219ENST00000600055 OR5D14Q8NGL3 314 aa12.59□□□□□ -0.39
LIG1-219ENST00000600055 NANPQ8TBE9 248 aa12.59□□□□□ -0.39
LIG1-219ENST00000600055 MED30Q96HR3 178 aa12.59□□□□□ -0.39
LIG1-219ENST00000600055 CEP19Q96LK0 163 aa12.59□□□□□ -0.39
LIG1-219ENST00000600055 OR5M11Q96RB7 305 aa12.59□□□□□ -0.39
LIG1-219ENST00000600055 CDCA4Q9BXL8 241 aa12.59□□□□□ -0.39
LIG1-219ENST00000600055 ELL3Q9HB65 397 aaPredicted RBP12.59□□□□□ -0.39
LIG1-219ENST00000600055 OR14J1Q9UGF5 321 aa12.59□□□□□ -0.39
LIG1-219ENST00000600055 TPRKBQ9Y3C4 175 aa12.59□□□□□ -0.39
LIG1-219ENST00000600055 IGHV3OR16-10A0A075B7F0 116 aa12.58□□□□□ -0.4
LIG1-219ENST00000600055 IGKV1-12A0A0C4DH73 117 aa12.58□□□□□ -0.4
LIG1-219ENST00000600055 TRBV5-5A0A0J9YX44 114 aa12.58□□□□□ -0.4
LIG1-219ENST00000600055 SULT1B1O43704 296 aa12.58□□□□□ -0.4
LIG1-219ENST00000600055 ANGPTL7O43827 346 aa12.58□□□□□ -0.4
LIG1-219ENST00000600055 IGKV1D-12P01611 117 aa12.58□□□□□ -0.4
LIG1-219ENST00000600055 HCKP08631 526 aa12.58□□□□□ -0.4
LIG1-219ENST00000600055 CELP19835 753 aa12.58□□□□□ -0.4
LIG1-219ENST00000600055 BCL3P20749 454 aa12.58□□□□□ -0.4
LIG1-219ENST00000600055 CRHBPP24387 322 aa12.58□□□□□ -0.4
LIG1-219ENST00000600055 PRDX2P32119 198 aa12.58□□□□□ -0.4
LIG1-219ENST00000600055 NPBWR2P48146 333 aa12.58□□□□□ -0.4
LIG1-219ENST00000600055 TAS2R43P59537 309 aa12.58□□□□□ -0.4
LIG1-219ENST00000600055 FGF12P61328 243 aa12.58□□□□□ -0.4
LIG1-219ENST00000600055 RPS11P62280 158 aaKnown RBP eCLIP12.58□□□□□ -0.4
LIG1-219ENST00000600055 PDZK1IP1Q13113 114 aa12.58□□□□□ -0.4
LIG1-219ENST00000600055 IRF3Q14653 427 aa12.58□□□□□ -0.4
LIG1-219ENST00000600055 LRRC10Q5BKY1 277 aa12.58□□□□□ -0.4
LIG1-219ENST00000600055 RNLSQ5VYX0 342 aa12.58□□□□□ -0.4
LIG1-219ENST00000600055 TMEM185AQ8NFB2 350 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms