RNA–Protein interactions for RNA: ENST00000599833.1

SHKBP1-221, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 761 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-221ENST00000599833 GATA3P23771 443 aa16.17■□□□□ 0.18
SHKBP1-221ENST00000599833 BDH1Q02338 343 aa16.17■□□□□ 0.18
SHKBP1-221ENST00000599833 DGUOKQ16854 277 aa16.17■□□□□ 0.18
SHKBP1-221ENST00000599833 CHRFAM7AQ494W8 412 aa16.17■□□□□ 0.18
SHKBP1-221ENST00000599833 DCAF12L2Q5VW00 463 aa16.17■□□□□ 0.18
SHKBP1-221ENST00000599833 NLRC3Q7RTR2 1065 aa16.17■□□□□ 0.18
SHKBP1-221ENST00000599833 BATF2Q8N1L9 274 aa16.17■□□□□ 0.18
SHKBP1-221ENST00000599833 OR51A2Q8NGJ7 313 aa16.17■□□□□ 0.18
SHKBP1-221ENST00000599833 GPR148Q8TDV2 347 aa16.17■□□□□ 0.18
SHKBP1-221ENST00000599833 MYDGFQ969H8 173 aa16.17■□□□□ 0.18
SHKBP1-221ENST00000599833 ORAI1Q96D31 301 aa16.17■□□□□ 0.18
SHKBP1-221ENST00000599833 BORCS8Q96FH0 119 aa16.17■□□□□ 0.18
SHKBP1-221ENST00000599833 OPALINQ96PE5 141 aa16.17■□□□□ 0.18
SHKBP1-221ENST00000599833 SPACA5Q96QH8 159 aa16.17■□□□□ 0.18
SHKBP1-221ENST00000599833 SHARPINQ9H0F6 387 aa16.17■□□□□ 0.18
SHKBP1-221ENST00000599833 SCN3BQ9NY72 215 aa16.17■□□□□ 0.18
SHKBP1-221ENST00000599833 RASL12Q9NYN1 266 aa16.17■□□□□ 0.18
SHKBP1-221ENST00000599833 CLN8Q9UBY8 286 aa16.17■□□□□ 0.18
SHKBP1-221ENST00000599833 TPRKBQ9Y3C4 175 aa16.17■□□□□ 0.18
SHKBP1-221ENST00000599833 MAB21L2Q9Y586 359 aa16.17■□□□□ 0.18
SHKBP1-221ENST00000599833 A0A0G2JMP0 313 aa16.16■□□□□ 0.18
SHKBP1-221ENST00000599833 A0A0X1KG70 313 aa16.16■□□□□ 0.18
SHKBP1-221ENST00000599833 OR2AT4A6NND4 320 aa16.16■□□□□ 0.18
SHKBP1-221ENST00000599833 J3QLI3 93 aa16.16■□□□□ 0.18
SHKBP1-221ENST00000599833 DVL1O14640 695 aa16.16■□□□□ 0.18
SHKBP1-221ENST00000599833 TMPRSS2O15393 492 aa16.16■□□□□ 0.18
SHKBP1-221ENST00000599833 FAM157CP0CG43 387 aa16.16■□□□□ 0.18
SHKBP1-221ENST00000599833 IGFBP3P17936 291 aaPredicted RBP16.16■□□□□ 0.18
SHKBP1-221ENST00000599833 SOX2P48431 317 aa16.16■□□□□ 0.18
SHKBP1-221ENST00000599833 RBP2P50120 134 aa16.16■□□□□ 0.18
SHKBP1-221ENST00000599833 NPY4RP50391 375 aa16.16■□□□□ 0.18
SHKBP1-221ENST00000599833 ZP1P60852 638 aa16.16■□□□□ 0.18
SHKBP1-221ENST00000599833 RBM48Q5RL73 367 aaKnown RBP16.16■□□□□ 0.18
SHKBP1-221ENST00000599833 FAHD2BQ6P2I3 314 aaPredicted RBP16.16■□□□□ 0.18
SHKBP1-221ENST00000599833 LHFPL2Q6ZUX7 228 aa16.16■□□□□ 0.18
SHKBP1-221ENST00000599833 SERPINA12Q8IW75 414 aa16.16■□□□□ 0.18
SHKBP1-221ENST00000599833 CD177Q8N6Q3 437 aa16.16■□□□□ 0.18
SHKBP1-221ENST00000599833 OR4M2Q8NGB6 313 aa16.16■□□□□ 0.18
SHKBP1-221ENST00000599833 RAB40AQ8WXH6 277 aa16.16■□□□□ 0.18
SHKBP1-221ENST00000599833 SDSLQ96GA7 329 aa16.16■□□□□ 0.18
SHKBP1-221ENST00000599833 FAHD2AQ96GK7 314 aa16.16■□□□□ 0.18
SHKBP1-221ENST00000599833 TAS2R4Q9NYW5 299 aa16.16■□□□□ 0.18
SHKBP1-221ENST00000599833 ERGIC3Q9Y282 383 aa16.16■□□□□ 0.18
SHKBP1-221ENST00000599833 POLDIP2Q9Y2S7 368 aa16.16■□□□□ 0.18
SHKBP1-221ENST00000599833 LOC105371242A0A075B767 164 aa16.15■□□□□ 0.18
SHKBP1-221ENST00000599833 TRBV5-7A0A0A0MS05 114 aa16.15■□□□□ 0.18
SHKBP1-221ENST00000599833 KIR2DS1A0A191URI9 304 aa16.15■□□□□ 0.18
SHKBP1-221ENST00000599833 SIGLEC5O15389 551 aa16.15■□□□□ 0.18
SHKBP1-221ENST00000599833 SULT1B1O43704 296 aa16.15■□□□□ 0.18
SHKBP1-221ENST00000599833 PRKACBP22694 351 aa16.15■□□□□ 0.18
SHKBP1-221ENST00000599833 TAS2R43P59537 309 aa16.15■□□□□ 0.18
SHKBP1-221ENST00000599833 TUSC1Q2TAM9 212 aa16.15■□□□□ 0.18
SHKBP1-221ENST00000599833 YIF1BQ5BJH7 314 aa16.15■□□□□ 0.18
SHKBP1-221ENST00000599833 SLC25A26Q70HW3 274 aa16.15■□□□□ 0.18
SHKBP1-221ENST00000599833 PRSS48Q7RTY5 328 aa16.15■□□□□ 0.18
SHKBP1-221ENST00000599833 LY6G5BQ8NDX9 201 aa16.15■□□□□ 0.18
SHKBP1-221ENST00000599833 TSEN15Q8WW01 171 aaKnown RBP16.15■□□□□ 0.18
SHKBP1-221ENST00000599833 TMEM106AQ96A25 262 aa16.15■□□□□ 0.18
SHKBP1-221ENST00000599833 SLAMF9Q96A28 289 aa16.15■□□□□ 0.18
SHKBP1-221ENST00000599833 TMIGD2Q96BF3 282 aa16.15■□□□□ 0.18
SHKBP1-221ENST00000599833 MND1Q9BWT6 205 aa16.15■□□□□ 0.18
SHKBP1-221ENST00000599833 BEX2Q9BXY8 128 aa16.15■□□□□ 0.18
SHKBP1-221ENST00000599833 DNAJB11Q9UBS4 358 aa16.15■□□□□ 0.18
SHKBP1-221ENST00000599833 METRNQ9UJH8 293 aa16.15■□□□□ 0.18
SHKBP1-221ENST00000599833 DSCAML1Q8TD84 2053 aa16.14■□□□□ 0.17
SHKBP1-221ENST00000599833 PNMA8CA0A1B0GUJ8 204 aa16.14■□□□□ 0.17
SHKBP1-221ENST00000599833 PIN1P1O15428 100 aa16.14■□□□□ 0.17
SHKBP1-221ENST00000599833 GPX5O75715 221 aa16.14■□□□□ 0.17
SHKBP1-221ENST00000599833 CELP19835 753 aa16.14■□□□□ 0.17
SHKBP1-221ENST00000599833 PCMT1P22061 227 aa16.14■□□□□ 0.17
SHKBP1-221ENST00000599833 NPBWR2P48146 333 aa16.14■□□□□ 0.17
SHKBP1-221ENST00000599833 ATP1B3P54709 279 aa16.14■□□□□ 0.17
SHKBP1-221ENST00000599833 GP2P55259 537 aaKnown RBP16.14■□□□□ 0.17
SHKBP1-221ENST00000599833 PDZK1IP1Q13113 114 aa16.14■□□□□ 0.17
SHKBP1-221ENST00000599833 SPHARQ15513 63 aa16.14■□□□□ 0.17
SHKBP1-221ENST00000599833 KLF17Q5JT82 389 aaPredicted RBP16.14■□□□□ 0.17
SHKBP1-221ENST00000599833 C1QL2Q7Z5L3 287 aa16.14■□□□□ 0.17
SHKBP1-221ENST00000599833 RFT1Q96AA3 541 aa16.14■□□□□ 0.17
SHKBP1-221ENST00000599833 IL36RNQ9UBH0 155 aa16.14■□□□□ 0.17
SHKBP1-221ENST00000599833 OR5V1Q9UGF6 321 aa16.14■□□□□ 0.17
SHKBP1-221ENST00000599833 MAGEA13PA6NCF6 341 aa16.13■□□□□ 0.17
SHKBP1-221ENST00000599833 RFPL4AA6NLU0 287 aa16.13■□□□□ 0.17
SHKBP1-221ENST00000599833 RFPL4AL1F8VTS6 287 aa16.13■□□□□ 0.17
SHKBP1-221ENST00000599833 RGS10O43665 173 aa16.13■□□□□ 0.17
SHKBP1-221ENST00000599833 PLATP00750 562 aa16.13■□□□□ 0.17
SHKBP1-221ENST00000599833 OCM2P0CE71 109 aa16.13■□□□□ 0.17
SHKBP1-221ENST00000599833 ADRA2CP18825 462 aa16.13■□□□□ 0.17
SHKBP1-221ENST00000599833 CEBPDP49716 269 aaPredicted RBP16.13■□□□□ 0.17
SHKBP1-221ENST00000599833 MTCP1P56278 107 aa16.13■□□□□ 0.17
SHKBP1-221ENST00000599833 LYPD6Q86Y78 171 aa16.13■□□□□ 0.17
SHKBP1-221ENST00000599833 OR5D14Q8NGL3 314 aa16.13■□□□□ 0.17
SHKBP1-221ENST00000599833 CEP19Q96LK0 163 aa16.13■□□□□ 0.17
SHKBP1-221ENST00000599833 NUDT16L1Q9BRJ7 211 aaKnown RBP16.13■□□□□ 0.17
SHKBP1-221ENST00000599833 C7orf69Q9H7B7 122 aa16.13■□□□□ 0.17
SHKBP1-221ENST00000599833 TRAV8-7A0A075B6U6 113 aa16.12■□□□□ 0.17
SHKBP1-221ENST00000599833 SPRY1O43609 319 aaPredicted RBP16.12■□□□□ 0.17
SHKBP1-221ENST00000599833 RRP9O43818 475 aaKnown RBP16.12■□□□□ 0.17
SHKBP1-221ENST00000599833 SC5DO75845 299 aa16.12■□□□□ 0.17
SHKBP1-221ENST00000599833 KDM4BO94953 1096 aa16.12■□□□□ 0.17
SHKBP1-221ENST00000599833 ALDOBP05062 364 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms