RNA–Protein interactions for RNA: ENST00000598209.5

UPF1-205, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 4

Gene UPF1, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-205ENST00000598209 STX19Q8N4C7 294 aa11.47□□□□□ -0.57
UPF1-205ENST00000598209 PNLDC1Q8NA58 520 aaKnown RBP11.47□□□□□ -0.57
UPF1-205ENST00000598209 RPS4Y2Q8TD47 263 aa11.47□□□□□ -0.57
UPF1-205ENST00000598209 TSEN15Q8WW01 171 aaKnown RBP11.47□□□□□ -0.57
UPF1-205ENST00000598209 GATAD2BQ8WXI9 593 aa11.47□□□□□ -0.57
UPF1-205ENST00000598209 SPSB1Q96BD6 273 aa11.47□□□□□ -0.57
UPF1-205ENST00000598209 UPRTQ96BW1 309 aa11.47□□□□□ -0.57
UPF1-205ENST00000598209 MDFIQ99750 246 aa11.47□□□□□ -0.57
UPF1-205ENST00000598209 ZCCHC4Q9H5U6 513 aa11.47□□□□□ -0.57
UPF1-205ENST00000598209 HES4Q9HCC6 221 aa11.47□□□□□ -0.57
UPF1-205ENST00000598209 BABAM2Q9NXR7 383 aa11.47□□□□□ -0.57
UPF1-205ENST00000598209 RPUSD1Q9UJJ7 312 aaKnown RBP11.47□□□□□ -0.57
UPF1-205ENST00000598209 DHDHQ9UQ10 334 aa11.47□□□□□ -0.57
UPF1-205ENST00000598209 RFPL4AA6NLU0 287 aa11.46□□□□□ -0.57
UPF1-205ENST00000598209 RFPL4AL1F8VTS6 287 aa11.46□□□□□ -0.57
UPF1-205ENST00000598209 GPR37O15354 613 aa11.46□□□□□ -0.57
UPF1-205ENST00000598209 OGG1O15527 345 aa11.46□□□□□ -0.57
UPF1-205ENST00000598209 TCF21O43680 179 aa11.46□□□□□ -0.57
UPF1-205ENST00000598209 INMTO95050 263 aa11.46□□□□□ -0.57
UPF1-205ENST00000598209 LALBAP00709 142 aa11.46□□□□□ -0.57
UPF1-205ENST00000598209 OCM2P0CE71 109 aa11.46□□□□□ -0.57
UPF1-205ENST00000598209 OCMP0CE72 109 aaPredicted RBP11.46□□□□□ -0.57
UPF1-205ENST00000598209 MTCP1P56278 107 aa11.46□□□□□ -0.57
UPF1-205ENST00000598209 ERVK11-1P61568 191 aa11.46□□□□□ -0.57
UPF1-205ENST00000598209 C6orf141Q5SZD1 244 aa11.46□□□□□ -0.57
UPF1-205ENST00000598209 LHFPL2Q6ZUX7 228 aa11.46□□□□□ -0.57
UPF1-205ENST00000598209 SLC25A26Q70HW3 274 aa11.46□□□□□ -0.57
UPF1-205ENST00000598209 OR13C9Q8NGT0 318 aa11.46□□□□□ -0.57
UPF1-205ENST00000598209 RGP1Q92546 391 aaPredicted RBP11.46□□□□□ -0.57
UPF1-205ENST00000598209 SLAMF9Q96A28 289 aa11.46□□□□□ -0.57
UPF1-205ENST00000598209 SDSLQ96GA7 329 aa11.46□□□□□ -0.57
UPF1-205ENST00000598209 CEP19Q96LK0 163 aa11.46□□□□□ -0.57
UPF1-205ENST00000598209 OPALINQ96PE5 141 aa11.46□□□□□ -0.57
UPF1-205ENST00000598209 FKBP14Q9NWM8 211 aa11.46□□□□□ -0.57
UPF1-205ENST00000598209 MTCH1Q9NZJ7 389 aa11.46□□□□□ -0.57
UPF1-205ENST00000598209 SLC25A10Q9UBX3 287 aaPredicted RBP11.46□□□□□ -0.57
UPF1-205ENST00000598209 NUP50Q9UKX7 468 aa11.46□□□□□ -0.57
UPF1-205ENST00000598209 MAB21L2Q9Y586 359 aa11.46□□□□□ -0.57
UPF1-205ENST00000598209 SIRT4Q9Y6E7 314 aaPredicted RBP11.46□□□□□ -0.57
UPF1-205ENST00000598209 IGHV3OR16-10A0A075B7F0 116 aa11.45□□□□□ -0.58
UPF1-205ENST00000598209 TRAV40A0A0B4J280 105 aa11.45□□□□□ -0.58
UPF1-205ENST00000598209 ZNF879B4DU55 563 aa11.45□□□□□ -0.58
UPF1-205ENST00000598209 MYL12BO14950 172 aa11.45□□□□□ -0.58
UPF1-205ENST00000598209 RGS9O75916 674 aaPredicted RBP11.45□□□□□ -0.58
UPF1-205ENST00000598209 ATP6V1G2O95670 118 aa11.45□□□□□ -0.58
UPF1-205ENST00000598209 MT-ND2P03891 347 aa11.45□□□□□ -0.58
UPF1-205ENST00000598209 IGHV4-38-2P0DP08 117 aa11.45□□□□□ -0.58
UPF1-205ENST00000598209 NDUFB7P17568 137 aa11.45□□□□□ -0.58
UPF1-205ENST00000598209 FPR2P25090 351 aa11.45□□□□□ -0.58
UPF1-205ENST00000598209 C21orf33P30042 268 aaPredicted RBP11.45□□□□□ -0.58
UPF1-205ENST00000598209 PRDX2P32119 198 aa11.45□□□□□ -0.58
UPF1-205ENST00000598209 SOX2P48431 317 aa11.45□□□□□ -0.58
UPF1-205ENST00000598209 POU3F4P49335 361 aa11.45□□□□□ -0.58
UPF1-205ENST00000598209 CEBPDP49716 269 aaPredicted RBP11.45□□□□□ -0.58
UPF1-205ENST00000598209 CAV3P56539 151 aa11.45□□□□□ -0.58
UPF1-205ENST00000598209 RIPK1Q13546 671 aa11.45□□□□□ -0.58
UPF1-205ENST00000598209 IZUMO2Q6UXV1 221 aa11.45□□□□□ -0.58
UPF1-205ENST00000598209 SERPINA12Q8IW75 414 aa11.45□□□□□ -0.58
UPF1-205ENST00000598209 BPIFB2Q8N4F0 458 aa11.45□□□□□ -0.58
UPF1-205ENST00000598209 PARP16Q8N5Y8 322 aa11.45□□□□□ -0.58
UPF1-205ENST00000598209 CD177Q8N6Q3 437 aa11.45□□□□□ -0.58
UPF1-205ENST00000598209 ZNF485Q8NCK3 441 aa11.45□□□□□ -0.58
UPF1-205ENST00000598209 ZNRF1Q8ND25 227 aa11.45□□□□□ -0.58
UPF1-205ENST00000598209 LY6G5BQ8NDX9 201 aa11.45□□□□□ -0.58
UPF1-205ENST00000598209 TMEM185AQ8NFB2 350 aa11.45□□□□□ -0.58
UPF1-205ENST00000598209 OR5D14Q8NGL3 314 aa11.45□□□□□ -0.58
UPF1-205ENST00000598209 GPR148Q8TDV2 347 aa11.45□□□□□ -0.58
UPF1-205ENST00000598209 ZNF418Q8TF45 676 aaPredicted RBP11.45□□□□□ -0.58
UPF1-205ENST00000598209 C22orf15Q8WYQ4 148 aa11.45□□□□□ -0.58
UPF1-205ENST00000598209 H1FXQ92522 213 aaKnown RBP11.45□□□□□ -0.58
UPF1-205ENST00000598209 RFT1Q96AA3 541 aa11.45□□□□□ -0.58
UPF1-205ENST00000598209 SMIM19Q96E16 107 aa11.45□□□□□ -0.58
UPF1-205ENST00000598209 SPACA5Q96QH8 159 aa11.45□□□□□ -0.58
UPF1-205ENST00000598209 SLC6A7Q99884 636 aa11.45□□□□□ -0.58
UPF1-205ENST00000598209 PCGF1Q9BSM1 259 aa11.45□□□□□ -0.58
UPF1-205ENST00000598209 DCTN5Q9BTE1 182 aa11.45□□□□□ -0.58
UPF1-205ENST00000598209 CNTD2Q9H8S5 307 aa11.45□□□□□ -0.58
UPF1-205ENST00000598209 NEK6Q9HC98 313 aa11.45□□□□□ -0.58
UPF1-205ENST00000598209 ZNF69Q9UC07 566 aa11.45□□□□□ -0.58
UPF1-205ENST00000598209 OR14J1Q9UGF5 321 aa11.45□□□□□ -0.58
UPF1-205ENST00000598209 ATRQ13535 2644 aa11.44□□□□□ -0.58
UPF1-205ENST00000598209 DSCAML1Q8TD84 2053 aa11.44□□□□□ -0.58
UPF1-205ENST00000598209 RNF212BA8MTL3 300 aa11.44□□□□□ -0.58
UPF1-205ENST00000598209 F8VVB4 439 aa11.44□□□□□ -0.58
UPF1-205ENST00000598209 F8VWA3 439 aa11.44□□□□□ -0.58
UPF1-205ENST00000598209 SLC1A7O00341 560 aa11.44□□□□□ -0.58
UPF1-205ENST00000598209 SPRY1O43609 319 aaPredicted RBP11.44□□□□□ -0.58
UPF1-205ENST00000598209 TOX4O94842 621 aa11.44□□□□□ -0.58
UPF1-205ENST00000598209 CYB5AP00167 134 aa11.44□□□□□ -0.58
UPF1-205ENST00000598209 KNG1P01042 644 aa11.44□□□□□ -0.58
UPF1-205ENST00000598209 CDK1P06493 297 aa11.44□□□□□ -0.58
UPF1-205ENST00000598209 SFTPBP07988 381 aa11.44□□□□□ -0.58
UPF1-205ENST00000598209 MMP9P14780 707 aa11.44□□□□□ -0.58
UPF1-205ENST00000598209 MYF6P23409 242 aa11.44□□□□□ -0.58
UPF1-205ENST00000598209 CAPZA1P52907 286 aa11.44□□□□□ -0.58
UPF1-205ENST00000598209 ARF6P62330 175 aa11.44□□□□□ -0.58
UPF1-205ENST00000598209 METTL11BQ5VVY1 283 aa11.44□□□□□ -0.58
UPF1-205ENST00000598209 DMKNQ6E0U4 476 aaPredicted RBP11.44□□□□□ -0.58
UPF1-205ENST00000598209 MKXQ8IYA7 352 aa11.44□□□□□ -0.58
UPF1-205ENST00000598209 ZNF561Q8N587 486 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms