RNA–Protein interactions for RNA: ENST00000597995.1

TRIM28-212, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 702 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-212ENST00000597995 V9GYS6 101 aa10.17□□□□□ -0.78
TRIM28-212ENST00000597995 IGKV1D-17A0A075B6S4 117 aa10.16□□□□□ -0.78
TRIM28-212ENST00000597995 A0A1W2PQL4 384 aaPredicted RBP10.16□□□□□ -0.78
TRIM28-212ENST00000597995 A6NIN4 97 aa10.16□□□□□ -0.78
TRIM28-212ENST00000597995 ZNF670-ZNF695F2Z2N8 137 aa10.16□□□□□ -0.78
TRIM28-212ENST00000597995 LOC110117498-PIK3R3F6TDL0 507 aa10.16□□□□□ -0.78
TRIM28-212ENST00000597995 DHRS3O75911 302 aa10.16□□□□□ -0.78
TRIM28-212ENST00000597995 ALPLP05186 524 aa10.16□□□□□ -0.78
TRIM28-212ENST00000597995 ATP6V1B1P15313 513 aa10.16□□□□□ -0.78
TRIM28-212ENST00000597995 GABRA2P47869 451 aa10.16□□□□□ -0.78
TRIM28-212ENST00000597995 GNG3P63215 75 aa10.16□□□□□ -0.78
TRIM28-212ENST00000597995 RIPPLY1Q0D2K3 151 aa10.16□□□□□ -0.78
TRIM28-212ENST00000597995 MOB3CQ70IA8 216 aa10.16□□□□□ -0.78
TRIM28-212ENST00000597995 C11orf44Q8N8P7 122 aa10.16□□□□□ -0.78
TRIM28-212ENST00000597995 ZNRF1Q8ND25 227 aa10.16□□□□□ -0.78
TRIM28-212ENST00000597995 OR5A2Q8NGI9 324 aa10.16□□□□□ -0.78
TRIM28-212ENST00000597995 OR8J1Q8NGP2 316 aa10.16□□□□□ -0.78
TRIM28-212ENST00000597995 ZNF671Q8TAW3 534 aa10.16□□□□□ -0.78
TRIM28-212ENST00000597995 AQP3Q92482 292 aa10.16□□□□□ -0.78
TRIM28-212ENST00000597995 SDSLQ96GA7 329 aa10.16□□□□□ -0.78
TRIM28-212ENST00000597995 HIST1H2AAQ96QV6 131 aa10.16□□□□□ -0.78
TRIM28-212ENST00000597995 HEXA-AS1Q9H8Q6 139 aa10.16□□□□□ -0.78
TRIM28-212ENST00000597995 ENOPH1Q9UHY7 261 aa10.16□□□□□ -0.78
TRIM28-212ENST00000597995 ZNF222Q9UK12 451 aa10.16□□□□□ -0.78
TRIM28-212ENST00000597995 OR52A1Q9UKL2 312 aa10.16□□□□□ -0.78
TRIM28-212ENST00000597995 A0A1W2PPH5 198 aa10.15□□□□□ -0.78
TRIM28-212ENST00000597995 EI24O14681 340 aa10.15□□□□□ -0.78
TRIM28-212ENST00000597995 ANGPTL7O43827 346 aa10.15□□□□□ -0.78
TRIM28-212ENST00000597995 RPP14O95059 124 aaKnown RBP10.15□□□□□ -0.78
TRIM28-212ENST00000597995 PRB2P02812 416 aaPredicted RBP10.15□□□□□ -0.78
TRIM28-212ENST00000597995 OR2T7P0C7T2 308 aa10.15□□□□□ -0.78
TRIM28-212ENST00000597995 PSG2P11465 335 aa10.15□□□□□ -0.78
TRIM28-212ENST00000597995 LOXL3P58215 753 aa10.15□□□□□ -0.78
TRIM28-212ENST00000597995 BCL2L15Q5TBC7 163 aa10.15□□□□□ -0.78
TRIM28-212ENST00000597995 ZBTB37Q5TC79 503 aa10.15□□□□□ -0.78
TRIM28-212ENST00000597995 COMMD2Q86X83 199 aa10.15□□□□□ -0.78
TRIM28-212ENST00000597995 FAM185AQ8N0U4 392 aa10.15□□□□□ -0.78
TRIM28-212ENST00000597995 Q8N2B8 174 aa10.15□□□□□ -0.78
TRIM28-212ENST00000597995 TMEM185AQ8NFB2 350 aa10.15□□□□□ -0.78
TRIM28-212ENST00000597995 OR4S1Q8NGB4 309 aa10.15□□□□□ -0.78
TRIM28-212ENST00000597995 OR2T27Q8NH04 317 aa10.15□□□□□ -0.78
TRIM28-212ENST00000597995 PIFOQ8TCI5 191 aa10.15□□□□□ -0.78
TRIM28-212ENST00000597995 MRAPQ8TCY5 172 aa10.15□□□□□ -0.78
TRIM28-212ENST00000597995 RORBQ92753 470 aa10.15□□□□□ -0.78
TRIM28-212ENST00000597995 CDCA4Q9BXL8 241 aa10.15□□□□□ -0.78
TRIM28-212ENST00000597995 MOB1AQ9H8S9 216 aa10.15□□□□□ -0.78
TRIM28-212ENST00000597995 ELL3Q9HB65 397 aaPredicted RBP10.15□□□□□ -0.78
TRIM28-212ENST00000597995 GPR173Q9NS66 373 aa10.15□□□□□ -0.78
TRIM28-212ENST00000597995 NECAP2Q9NVZ3 263 aa10.15□□□□□ -0.78
TRIM28-212ENST00000597995 RASL12Q9NYN1 266 aa10.15□□□□□ -0.78
TRIM28-212ENST00000597995 USE1Q9NZ43 259 aa10.15□□□□□ -0.78
TRIM28-212ENST00000597995 ENPP5Q9UJA9 477 aa10.15□□□□□ -0.78
TRIM28-212ENST00000597995 GTF2A1LQ9UNN4 478 aa10.15□□□□□ -0.78
TRIM28-212ENST00000597995 SNX5Q9Y5X3 404 aa10.15□□□□□ -0.78
TRIM28-212ENST00000597995 hCG_1809904A0A1W2PP81 198 aa10.14□□□□□ -0.79
TRIM28-212ENST00000597995 A0A1W2PPE2 198 aa10.14□□□□□ -0.79
TRIM28-212ENST00000597995 A0A1W2PR64 198 aa10.14□□□□□ -0.79
TRIM28-212ENST00000597995 A0A1W2PRV1 198 aa10.14□□□□□ -0.79
TRIM28-212ENST00000597995 MEGF11A6BM72 1044 aa10.14□□□□□ -0.79
TRIM28-212ENST00000597995 OR5B21A6NL26 309 aa10.14□□□□□ -0.79
TRIM28-212ENST00000597995 VGLL3A8MV65 326 aa10.14□□□□□ -0.79
TRIM28-212ENST00000597995 SYNGR1O43759 233 aa10.14□□□□□ -0.79
TRIM28-212ENST00000597995 NRASP01111 189 aa10.14□□□□□ -0.79
TRIM28-212ENST00000597995 VSIG10L2P0DP72 767 aa10.14□□□□□ -0.79
TRIM28-212ENST00000597995 CCL1P22362 96 aa10.14□□□□□ -0.79
TRIM28-212ENST00000597995 ISL1P61371 349 aa10.14□□□□□ -0.79
TRIM28-212ENST00000597995 ZNF85Q03923 595 aa10.14□□□□□ -0.79
TRIM28-212ENST00000597995 ZIK1Q3SY52 487 aaPredicted RBP10.14□□□□□ -0.79
TRIM28-212ENST00000597995 OXLD1Q5BKU9 147 aa10.14□□□□□ -0.79
TRIM28-212ENST00000597995 PLCXD3Q63HM9 321 aa10.14□□□□□ -0.79
TRIM28-212ENST00000597995 HAGHLQ6PII5 290 aaPredicted RBP10.14□□□□□ -0.79
TRIM28-212ENST00000597995 THAP5Q7Z6K1 395 aa10.14□□□□□ -0.79
TRIM28-212ENST00000597995 CATSPERDQ86XM0 798 aa10.14□□□□□ -0.79
TRIM28-212ENST00000597995 MKXQ8IYA7 352 aa10.14□□□□□ -0.79
TRIM28-212ENST00000597995 C11orf42Q8N5U0 333 aa10.14□□□□□ -0.79
TRIM28-212ENST00000597995 HRASLS5Q96KN8 279 aa10.14□□□□□ -0.79
TRIM28-212ENST00000597995 ZNF488Q96MN9 340 aa10.14□□□□□ -0.79
TRIM28-212ENST00000597995 SERTAD4Q9NUC0 356 aa10.14□□□□□ -0.79
TRIM28-212ENST00000597995 AASSQ9UDR5 926 aa10.14□□□□□ -0.79
TRIM28-212ENST00000597995 PQLC2LA1A4F0 135 aa10.13□□□□□ -0.79
TRIM28-212ENST00000597995 METTL15A6NJ78 407 aa10.13□□□□□ -0.79
TRIM28-212ENST00000597995 H3BSH0 61 aa10.13□□□□□ -0.79
TRIM28-212ENST00000597995 J3QRE1 110 aa10.13□□□□□ -0.79
TRIM28-212ENST00000597995 DLGAP1O14490 977 aa10.13□□□□□ -0.79
TRIM28-212ENST00000597995 CHST1O43916 411 aa10.13□□□□□ -0.79
TRIM28-212ENST00000597995 ENTPD6O75354 484 aa10.13□□□□□ -0.79
TRIM28-212ENST00000597995 FBXO24O75426 580 aa10.13□□□□□ -0.79
TRIM28-212ENST00000597995 MTRF1O75570 445 aaKnown RBP10.13□□□□□ -0.79
TRIM28-212ENST00000597995 KRT8P05787 483 aa10.13□□□□□ -0.79
TRIM28-212ENST00000597995 LGALS4P56470 323 aa10.13□□□□□ -0.79
TRIM28-212ENST00000597995 TMED1Q13445 227 aa10.13□□□□□ -0.79
TRIM28-212ENST00000597995 ODF4Q2M2E3 257 aa10.13□□□□□ -0.79
TRIM28-212ENST00000597995 CLVS2Q5SYC1 327 aa10.13□□□□□ -0.79
TRIM28-212ENST00000597995 CCDC121Q6ZUS5 278 aa10.13□□□□□ -0.79
TRIM28-212ENST00000597995 NDUFA11Q86Y39 141 aa10.13□□□□□ -0.79
TRIM28-212ENST00000597995 PRSS35Q8N3Z0 413 aa10.13□□□□□ -0.79
TRIM28-212ENST00000597995 YIPF7Q8N8F6 280 aa10.13□□□□□ -0.79
TRIM28-212ENST00000597995 OR10H4Q8NGA5 316 aa10.13□□□□□ -0.79
TRIM28-212ENST00000597995 OR4F17Q8NGA8 305 aa10.13□□□□□ -0.79
TRIM28-212ENST00000597995 OR4F4Q96R69 305 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms