RNA–Protein interactions for RNA: ENST00000597618.5

TRIM28-210, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 609 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-210ENST00000597618 OR14J1Q9UGF5 321 aa8.04□□□□□ -1.12
TRIM28-210ENST00000597618 hADV38S2A0JD32 116 aa8.03□□□□□ -1.12
TRIM28-210ENST00000597618 MEX3AA1L020 520 aaKnown RBP8.03□□□□□ -1.12
TRIM28-210ENST00000597618 SH2D7A6NKC9 451 aaPredicted RBP8.03□□□□□ -1.12
TRIM28-210ENST00000597618 RIIAD1A6NNX1 92 aa8.03□□□□□ -1.12
TRIM28-210ENST00000597618 IFNGP01579 166 aa8.03□□□□□ -1.12
TRIM28-210ENST00000597618 AMY1AP04745 511 aa8.03□□□□□ -1.12
TRIM28-210ENST00000597618 AMY2AP04746 511 aa8.03□□□□□ -1.12
TRIM28-210ENST00000597618 CD24P25063 80 aa8.03□□□□□ -1.12
TRIM28-210ENST00000597618 GSTT1P30711 240 aa8.03□□□□□ -1.12
TRIM28-210ENST00000597618 RRM2P31350 389 aa8.03□□□□□ -1.12
TRIM28-210ENST00000597618 HAAOP46952 286 aa8.03□□□□□ -1.12
TRIM28-210ENST00000597618 RAB25P57735 213 aa8.03□□□□□ -1.12
TRIM28-210ENST00000597618 SNAPC1Q16533 368 aa8.03□□□□□ -1.12
TRIM28-210ENST00000597618 C9orf66Q5T8R8 295 aa8.03□□□□□ -1.12
TRIM28-210ENST00000597618 LCN1P1Q5VSP4 162 aa8.03□□□□□ -1.12
TRIM28-210ENST00000597618 C18orf65Q6ZTR6 163 aa8.03□□□□□ -1.12
TRIM28-210ENST00000597618 MOB3CQ70IA8 216 aa8.03□□□□□ -1.12
TRIM28-210ENST00000597618 TCF23Q7RTU1 214 aa8.03□□□□□ -1.12
TRIM28-210ENST00000597618 ZNF329Q86UD4 541 aa8.03□□□□□ -1.12
TRIM28-210ENST00000597618 ZNF573Q86YE8 665 aa8.03□□□□□ -1.12
TRIM28-210ENST00000597618 OR4P4Q8NGL7 312 aa8.03□□□□□ -1.12
TRIM28-210ENST00000597618 OR8D4Q8NGM9 314 aa8.03□□□□□ -1.12
TRIM28-210ENST00000597618 TMEM133Q9H2Q1 129 aa8.03□□□□□ -1.12
TRIM28-210ENST00000597618 NIPAL2Q9H841 368 aa8.03□□□□□ -1.12
TRIM28-210ENST00000597618 HES4Q9HCC6 221 aa8.03□□□□□ -1.12
TRIM28-210ENST00000597618 IL20Q9NYY1 176 aa8.03□□□□□ -1.12
TRIM28-210ENST00000597618 DPM3Q9P2X0 92 aa8.03□□□□□ -1.12
TRIM28-210ENST00000597618 BAIAP2Q9UQB8 552 aa8.03□□□□□ -1.12
TRIM28-210ENST00000597618 SLC22A13Q9Y226 551 aa8.03□□□□□ -1.12
TRIM28-210ENST00000597618 CSMD3Q7Z407 3707 aa8.03□□□□□ -1.12
TRIM28-210ENST00000597618 HYDINQ4G0P3 5121 aa8.02□□□□□ -1.13
TRIM28-210ENST00000597618 A0A0U1RQV5 110 aa8.02□□□□□ -1.13
TRIM28-210ENST00000597618 GMNNO75496 209 aa8.02□□□□□ -1.13
TRIM28-210ENST00000597618 SEMG1P04279 462 aa8.02□□□□□ -1.13
TRIM28-210ENST00000597618 LYNP07948 512 aa8.02□□□□□ -1.13
TRIM28-210ENST00000597618 ATP6V1B1P15313 513 aa8.02□□□□□ -1.13
TRIM28-210ENST00000597618 ZNF3P17036 446 aa8.02□□□□□ -1.13
TRIM28-210ENST00000597618 ECI1P42126 302 aa8.02□□□□□ -1.13
TRIM28-210ENST00000597618 OR3A4PP47883 348 aa8.02□□□□□ -1.13
TRIM28-210ENST00000597618 RIPPLY1Q0D2K3 151 aa8.02□□□□□ -1.13
TRIM28-210ENST00000597618 SAMD4BQ5PRF9 694 aaKnown RBP8.02□□□□□ -1.13
TRIM28-210ENST00000597618 ZNF684Q5T5D7 378 aa8.02□□□□□ -1.13
TRIM28-210ENST00000597618 GLYATQ6IB77 296 aa8.02□□□□□ -1.13
TRIM28-210ENST00000597618 C8orf82Q6P1X6 216 aaPredicted RBP8.02□□□□□ -1.13
TRIM28-210ENST00000597618 RASSF6Q6ZTQ3 369 aa8.02□□□□□ -1.13
TRIM28-210ENST00000597618 MEPCEQ7L2J0 689 aaKnown RBP8.02□□□□□ -1.13
TRIM28-210ENST00000597618 COMMD2Q86X83 199 aa8.02□□□□□ -1.13
TRIM28-210ENST00000597618 ZNF695Q8IW36 515 aa8.02□□□□□ -1.13
TRIM28-210ENST00000597618 OR8H2Q8N162 312 aa8.02□□□□□ -1.13
TRIM28-210ENST00000597618 COMMD1Q8N668 190 aa8.02□□□□□ -1.13
TRIM28-210ENST00000597618 ZNF454Q8N9F8 522 aa8.02□□□□□ -1.13
TRIM28-210ENST00000597618 OR2T33Q8NG76 320 aa8.02□□□□□ -1.13
TRIM28-210ENST00000597618 OR5M8Q8NGP6 311 aa8.02□□□□□ -1.13
TRIM28-210ENST00000597618 CHPT1Q8WUD6 406 aa8.02□□□□□ -1.13
TRIM28-210ENST00000597618 MCUR1Q96AQ8 359 aa8.02□□□□□ -1.13
TRIM28-210ENST00000597618 TSSK6Q9BXA6 273 aa8.02□□□□□ -1.13
TRIM28-210ENST00000597618 MYLK2Q9H1R3 596 aa8.02□□□□□ -1.13
TRIM28-210ENST00000597618 PAPOLBQ9NRJ5 636 aaKnown RBP8.02□□□□□ -1.13
TRIM28-210ENST00000597618 NKX1-2Q9UD57 310 aaPredicted RBP8.02□□□□□ -1.13
TRIM28-210ENST00000597618 ENPP5Q9UJA9 477 aa8.02□□□□□ -1.13
TRIM28-210ENST00000597618 MOB4Q9Y3A3 225 aa8.02□□□□□ -1.13
TRIM28-210ENST00000597618 LINC00312Q9Y6C7 94 aa8.02□□□□□ -1.13
TRIM28-210ENST00000597618 HSPE1-MOB4S4R3N1 261 aa8.02□□□□□ -1.13
TRIM28-210ENST00000597618 V9GYQ6 96 aa8.02□□□□□ -1.13
TRIM28-210ENST00000597618 LEUTXA8MZ59 168 aa8.01□□□□□ -1.13
TRIM28-210ENST00000597618 CCL24O00175 119 aa8.01□□□□□ -1.13
TRIM28-210ENST00000597618 GSC2O15499 205 aa8.01□□□□□ -1.13
TRIM28-210ENST00000597618 ZNF737O75373 536 aa8.01□□□□□ -1.13
TRIM28-210ENST00000597618 FABP3P05413 133 aa8.01□□□□□ -1.13
TRIM28-210ENST00000597618 SLC35B1P78383 322 aa8.01□□□□□ -1.13
TRIM28-210ENST00000597618 BDH1Q02338 343 aa8.01□□□□□ -1.13
TRIM28-210ENST00000597618 EDDM3AQ14507 147 aa8.01□□□□□ -1.13
TRIM28-210ENST00000597618 OR9Q2Q8NGE9 314 aa8.01□□□□□ -1.13
TRIM28-210ENST00000597618 OR4Q3Q8NH05 313 aa8.01□□□□□ -1.13
TRIM28-210ENST00000597618 OTOSQ8NHW6 89 aa8.01□□□□□ -1.13
TRIM28-210ENST00000597618 ZNF596Q8TC21 504 aa8.01□□□□□ -1.13
TRIM28-210ENST00000597618 THEM6Q8WUY1 208 aa8.01□□□□□ -1.13
TRIM28-210ENST00000597618 PYURFQ96I23 114 aa8.01□□□□□ -1.13
TRIM28-210ENST00000597618 RAX2Q96IS3 184 aa8.01□□□□□ -1.13
TRIM28-210ENST00000597618 KRTAP17-1Q9BYP8 105 aa8.01□□□□□ -1.13
TRIM28-210ENST00000597618 IL1RAPQ9NPH3 570 aa8.01□□□□□ -1.13
TRIM28-210ENST00000597618 CMC2Q9NRP2 79 aa8.01□□□□□ -1.13
TRIM28-210ENST00000597618 ABCD2Q9UBJ2 740 aa8.01□□□□□ -1.13
TRIM28-210ENST00000597618 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP8.01□□□□□ -1.13
TRIM28-210ENST00000597618 PIGLQ9Y2B2 252 aa8.01□□□□□ -1.13
TRIM28-210ENST00000597618 ZNF256Q9Y2P7 627 aaPredicted RBP8.01□□□□□ -1.13
TRIM28-210ENST00000597618 SMAD5-AS1Q9Y6J3 95 aa8.01□□□□□ -1.13
TRIM28-210ENST00000597618 ACOD1A6NK06 481 aa8□□□□□ -1.13
TRIM28-210ENST00000597618 SEC14L6B5MCN3 397 aa8□□□□□ -1.13
TRIM28-210ENST00000597618 PSMD9O00233 223 aa8□□□□□ -1.13
TRIM28-210ENST00000597618 KRT36O76013 467 aa8□□□□□ -1.13
TRIM28-210ENST00000597618 NRASP01111 189 aa8□□□□□ -1.13
TRIM28-210ENST00000597618 MPZP25189 248 aa8□□□□□ -1.13
TRIM28-210ENST00000597618 CEACAM3P40198 252 aa8□□□□□ -1.13
TRIM28-210ENST00000597618 ERVK11-1P61568 191 aa8□□□□□ -1.13
TRIM28-210ENST00000597618 CBX1P83916 185 aa8□□□□□ -1.13
TRIM28-210ENST00000597618 OR52W1Q6IF63 320 aa8□□□□□ -1.13
TRIM28-210ENST00000597618 CCDC144NLQ6NUI1 221 aa8□□□□□ -1.13
TRIM28-210ENST00000597618 HACD2Q6Y1H2 254 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms