RNA–Protein interactions for RNA: ENST00000597325.1

SHKBP1-213, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 366 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-213ENST00000597325 TMEM225BP0DP42 221 aa10.19□□□□□ -0.78
SHKBP1-213ENST00000597325 HAAOP46952 286 aa10.19□□□□□ -0.78
SHKBP1-213ENST00000597325 OR3A4PP47883 348 aa10.19□□□□□ -0.78
SHKBP1-213ENST00000597325 ATP5J2P56134 94 aa10.19□□□□□ -0.78
SHKBP1-213ENST00000597325 RIN1Q13671 783 aa10.19□□□□□ -0.78
SHKBP1-213ENST00000597325 SWI5Q1ZZU3 235 aa10.19□□□□□ -0.78
SHKBP1-213ENST00000597325 MST1LQ2TV78 715 aa10.19□□□□□ -0.78
SHKBP1-213ENST00000597325 CNPY1Q3B7I2 92 aa10.19□□□□□ -0.78
SHKBP1-213ENST00000597325 HAGHLQ6PII5 290 aaPredicted RBP10.19□□□□□ -0.78
SHKBP1-213ENST00000597325 DTX2Q86UW9 622 aa10.19□□□□□ -0.78
SHKBP1-213ENST00000597325 NR2C2APQ86WQ0 139 aa10.19□□□□□ -0.78
SHKBP1-213ENST00000597325 CELF2-AS1Q8N7Q2 184 aa10.19□□□□□ -0.78
SHKBP1-213ENST00000597325 OR5D18Q8NGL1 313 aa10.19□□□□□ -0.78
SHKBP1-213ENST00000597325 SGMS2Q8NHU3 365 aa10.19□□□□□ -0.78
SHKBP1-213ENST00000597325 MEGF10Q96KG7 1140 aa10.19□□□□□ -0.78
SHKBP1-213ENST00000597325 OR2V2Q96R30 315 aa10.19□□□□□ -0.78
SHKBP1-213ENST00000597325 VRK1Q99986 396 aaPredicted RBP10.19□□□□□ -0.78
SHKBP1-213ENST00000597325 TRAF4Q9BUZ4 470 aaPredicted RBP10.19□□□□□ -0.78
SHKBP1-213ENST00000597325 BEX2Q9BXY8 128 aa10.19□□□□□ -0.78
SHKBP1-213ENST00000597325 PKIBQ9C010 78 aa10.19□□□□□ -0.78
SHKBP1-213ENST00000597325 FGF23Q9GZV9 251 aaPredicted RBP10.19□□□□□ -0.78
SHKBP1-213ENST00000597325 CNTD2Q9H8S5 307 aa10.19□□□□□ -0.78
SHKBP1-213ENST00000597325 SAP30LQ9HAJ7 183 aa10.19□□□□□ -0.78
SHKBP1-213ENST00000597325 ELL3Q9HB65 397 aaPredicted RBP10.19□□□□□ -0.78
SHKBP1-213ENST00000597325 IL19Q9UHD0 177 aa10.19□□□□□ -0.78
SHKBP1-213ENST00000597325 LAMP3Q9UQV4 416 aa10.19□□□□□ -0.78
SHKBP1-213ENST00000597325 POLDIP2Q9Y2S7 368 aa10.19□□□□□ -0.78
SHKBP1-213ENST00000597325 IGKV1-27A0A075B6S5 117 aa10.18□□□□□ -0.78
SHKBP1-213ENST00000597325 hCG_1807616A0A1W2PRN6 198 aa10.18□□□□□ -0.78
SHKBP1-213ENST00000597325 CD55P08174 381 aa10.18□□□□□ -0.78
SHKBP1-213ENST00000597325 SOD3P08294 240 aa10.18□□□□□ -0.78
SHKBP1-213ENST00000597325 DANCRP0C864 163 aa10.18□□□□□ -0.78
SHKBP1-213ENST00000597325 UBBP0CG47 229 aa10.18□□□□□ -0.78
SHKBP1-213ENST00000597325 TNFRSF1AP19438 455 aa10.18□□□□□ -0.78
SHKBP1-213ENST00000597325 PTGFRP43088 359 aa10.18□□□□□ -0.78
SHKBP1-213ENST00000597325 ZNF154Q13106 437 aa10.18□□□□□ -0.78
SHKBP1-213ENST00000597325 P2RY14Q15391 338 aa10.18□□□□□ -0.78
SHKBP1-213ENST00000597325 C1orf100Q5SVJ3 147 aa10.18□□□□□ -0.78
SHKBP1-213ENST00000597325 PRAMEF6Q5VXH4 476 aa10.18□□□□□ -0.78
SHKBP1-213ENST00000597325 C11orf71Q6IPW1 123 aa10.18□□□□□ -0.78
SHKBP1-213ENST00000597325 MZT2AQ6P582 158 aa10.18□□□□□ -0.78
SHKBP1-213ENST00000597325 SLC25A26Q70HW3 274 aa10.18□□□□□ -0.78
SHKBP1-213ENST00000597325 ANGPTL5Q86XS5 388 aa10.18□□□□□ -0.78
SHKBP1-213ENST00000597325 MKXQ8IYA7 352 aa10.18□□□□□ -0.78
SHKBP1-213ENST00000597325 ITLN1Q8WWA0 313 aa10.18□□□□□ -0.78
SHKBP1-213ENST00000597325 ACOT12Q8WYK0 555 aa10.18□□□□□ -0.78
SHKBP1-213ENST00000597325 KCTD12Q96CX2 325 aaKnown RBP10.18□□□□□ -0.78
SHKBP1-213ENST00000597325 NKX3-1Q99801 234 aaPredicted RBP10.18□□□□□ -0.78
SHKBP1-213ENST00000597325 MRI1Q9BV20 369 aa10.18□□□□□ -0.78
SHKBP1-213ENST00000597325 CACNG6Q9BXT2 260 aa10.18□□□□□ -0.78
SHKBP1-213ENST00000597325 RAB1BQ9H0U4 201 aa10.18□□□□□ -0.78
SHKBP1-213ENST00000597325 OR51I2Q9H344 312 aa10.18□□□□□ -0.78
SHKBP1-213ENST00000597325 FN3KRPQ9HA64 309 aa10.18□□□□□ -0.78
SHKBP1-213ENST00000597325 LIN7BQ9HAP6 207 aa10.18□□□□□ -0.78
SHKBP1-213ENST00000597325 SMURF1Q9HCE7 757 aa10.18□□□□□ -0.78
SHKBP1-213ENST00000597325 YLPM1P49750 1951 aaKnown RBP10.17□□□□□ -0.78
SHKBP1-213ENST00000597325 IGHV3-64DA0A0J9YX35 117 aa10.17□□□□□ -0.78
SHKBP1-213ENST00000597325 LOC100289279A0A1B0GTE1 492 aa10.17□□□□□ -0.78
SHKBP1-213ENST00000597325 BPNT1O95861 308 aa10.17□□□□□ -0.78
SHKBP1-213ENST00000597325 SLC2A2P11168 524 aaPredicted RBP10.17□□□□□ -0.78
SHKBP1-213ENST00000597325 ARSBP15848 533 aa10.17□□□□□ -0.78
SHKBP1-213ENST00000597325 CLDN12P56749 244 aa10.17□□□□□ -0.78
SHKBP1-213ENST00000597325 CCL8P80075 99 aa10.17□□□□□ -0.78
SHKBP1-213ENST00000597325 IL24Q13007 206 aa10.17□□□□□ -0.78
SHKBP1-213ENST00000597325 PDZK1IP1Q13113 114 aa10.17□□□□□ -0.78
SHKBP1-213ENST00000597325 MAB21L1Q13394 359 aa10.17□□□□□ -0.78
SHKBP1-213ENST00000597325 RSU1Q15404 277 aa10.17□□□□□ -0.78
SHKBP1-213ENST00000597325 ZNF404Q494X3 552 aa10.17□□□□□ -0.78
SHKBP1-213ENST00000597325 GLIPR1L1Q6UWM5 242 aa10.17□□□□□ -0.78
SHKBP1-213ENST00000597325 DNM1P46Q6ZS02 220 aa10.17□□□□□ -0.78
SHKBP1-213ENST00000597325 WDR86Q86TI4 376 aa10.17□□□□□ -0.78
SHKBP1-213ENST00000597325 SAXO1Q8IYX7 474 aa10.17□□□□□ -0.78
SHKBP1-213ENST00000597325 ZSCAN4Q8NAM6 433 aaPredicted RBP10.17□□□□□ -0.78
SHKBP1-213ENST00000597325 SCCPDHQ8NBX0 429 aa10.17□□□□□ -0.78
SHKBP1-213ENST00000597325 OR4D6Q8NGJ1 314 aa10.17□□□□□ -0.78
SHKBP1-213ENST00000597325 OR11L1Q8NGX0 322 aa10.17□□□□□ -0.78
SHKBP1-213ENST00000597325 MCFD2Q8NI22 146 aa10.17□□□□□ -0.78
SHKBP1-213ENST00000597325 TBC1D15Q8TC07 691 aa10.17□□□□□ -0.78
SHKBP1-213ENST00000597325 BARHL1Q9BZE3 327 aa10.17□□□□□ -0.78
SHKBP1-213ENST00000597325 CST11Q9H112 138 aa10.17□□□□□ -0.78
SHKBP1-213ENST00000597325 METTL9Q9H1A3 318 aa10.17□□□□□ -0.78
SHKBP1-213ENST00000597325 PCDHB16Q9NRJ7 776 aa10.17□□□□□ -0.78
SHKBP1-213ENST00000597325 UFSP2Q9NUQ7 469 aa10.17□□□□□ -0.78
SHKBP1-213ENST00000597325 PTTG2Q9NZH5 202 aa10.17□□□□□ -0.78
SHKBP1-213ENST00000597325 ABRACLQ9P1F3 81 aa10.17□□□□□ -0.78
SHKBP1-213ENST00000597325 GHRLQ9UBU3 117 aa10.17□□□□□ -0.78
SHKBP1-213ENST00000597325 LPAR3Q9UBY5 353 aa10.17□□□□□ -0.78
SHKBP1-213ENST00000597325 ING4Q9UNL4 249 aa10.17□□□□□ -0.78
SHKBP1-213ENST00000597325 TRAPPC2LH3BP13 241 aa10.16□□□□□ -0.78
SHKBP1-213ENST00000597325 H7C417 338 aa10.16□□□□□ -0.78
SHKBP1-213ENST00000597325 CDIPTO14735 213 aa10.16□□□□□ -0.78
SHKBP1-213ENST00000597325 CD8AP01732 235 aa10.16□□□□□ -0.78
SHKBP1-213ENST00000597325 CSTBP04080 98 aaKnown RBP10.16□□□□□ -0.78
SHKBP1-213ENST00000597325 CALCBP10092 127 aa10.16□□□□□ -0.78
SHKBP1-213ENST00000597325 IRF2P14316 349 aa10.16□□□□□ -0.78
SHKBP1-213ENST00000597325 SNRPBP14678 240 aaKnown RBP10.16□□□□□ -0.78
SHKBP1-213ENST00000597325 MPZP25189 248 aa10.16□□□□□ -0.78
SHKBP1-213ENST00000597325 GATA4P43694 442 aa10.16□□□□□ -0.78
SHKBP1-213ENST00000597325 SCAND1P57086 179 aa10.16□□□□□ -0.78
SHKBP1-213ENST00000597325 ZP1P60852 638 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms