RNA–Protein interactions for RNA: ENST00000597215.5

VRK3-213, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 836 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-213ENST00000597215 WDR13Q9H1Z4 485 aa12.02□□□□□ -0.49
VRK3-213ENST00000597215 PATZ1Q9HBE1 687 aaKnown RBP12.02□□□□□ -0.49
VRK3-213ENST00000597215 MIOXQ9UGB7 285 aa12.02□□□□□ -0.49
VRK3-213ENST00000597215 YLPM1P49750 1951 aaKnown RBP12.01□□□□□ -0.49
VRK3-213ENST00000597215 TRDV1A0A1B0GX56 115 aa12.01□□□□□ -0.49
VRK3-213ENST00000597215 MEGF11A6BM72 1044 aa12.01□□□□□ -0.49
VRK3-213ENST00000597215 MAGEA13PA6NCF6 341 aa12.01□□□□□ -0.49
VRK3-213ENST00000597215 F5H0A9 414 aaPredicted RBP12.01□□□□□ -0.49
VRK3-213ENST00000597215 TRAPPC2LH3BP13 241 aa12.01□□□□□ -0.49
VRK3-213ENST00000597215 SPRY1O43609 319 aaPredicted RBP12.01□□□□□ -0.49
VRK3-213ENST00000597215 GYPAP02724 150 aa12.01□□□□□ -0.49
VRK3-213ENST00000597215 TMEM225BP0DP42 221 aa12.01□□□□□ -0.49
VRK3-213ENST00000597215 RPS2P15880 293 aaKnown RBP12.01□□□□□ -0.49
VRK3-213ENST00000597215 JUNBP17275 347 aaPredicted RBP12.01□□□□□ -0.49
VRK3-213ENST00000597215 SRMP19623 302 aa12.01□□□□□ -0.49
VRK3-213ENST00000597215 IL2RGP31785 369 aa12.01□□□□□ -0.49
VRK3-213ENST00000597215 ZNF93P35789 620 aaPredicted RBP12.01□□□□□ -0.49
VRK3-213ENST00000597215 GZMKP49863 264 aa12.01□□□□□ -0.49
VRK3-213ENST00000597215 ZP1P60852 638 aa12.01□□□□□ -0.49
VRK3-213ENST00000597215 ERVK11-1P61568 191 aa12.01□□□□□ -0.49
VRK3-213ENST00000597215 CRIP3Q6Q6R5 217 aa12.01□□□□□ -0.49
VRK3-213ENST00000597215 ACP7Q6ZNF0 438 aa12.01□□□□□ -0.49
VRK3-213ENST00000597215 NLRC3Q7RTR2 1065 aa12.01□□□□□ -0.49
VRK3-213ENST00000597215 RNF144BQ7Z419 303 aa12.01□□□□□ -0.49
VRK3-213ENST00000597215 CDH26Q8IXH8 852 aa12.01□□□□□ -0.49
VRK3-213ENST00000597215 OR51F2Q8NH61 342 aa12.01□□□□□ -0.49
VRK3-213ENST00000597215 ZNF488Q96MN9 340 aa12.01□□□□□ -0.49
VRK3-213ENST00000597215 MRPS26Q9BYN8 205 aaKnown RBP12.01□□□□□ -0.49
VRK3-213ENST00000597215 SMURF1Q9HCE7 757 aa12.01□□□□□ -0.49
VRK3-213ENST00000597215 MTCH1Q9NZJ7 389 aa12.01□□□□□ -0.49
VRK3-213ENST00000597215 NLKQ9UBE8 527 aa12.01□□□□□ -0.49
VRK3-213ENST00000597215 STUB1Q9UNE7 303 aa12.01□□□□□ -0.49
VRK3-213ENST00000597215 NKX6-3A6NJ46 265 aa12□□□□□ -0.49
VRK3-213ENST00000597215 ANGPTL7O43827 346 aa12□□□□□ -0.49
VRK3-213ENST00000597215 IGHV4-31P0DP07 118 aa12□□□□□ -0.49
VRK3-213ENST00000597215 CD36P16671 472 aa12□□□□□ -0.49
VRK3-213ENST00000597215 CALRP27797 417 aaKnown RBP12□□□□□ -0.49
VRK3-213ENST00000597215 STUMQ69YW2 141 aa12□□□□□ -0.49
VRK3-213ENST00000597215 FIP1L1Q6UN15 594 aaKnown RBP12□□□□□ -0.49
VRK3-213ENST00000597215 JAGN1Q8N5M9 183 aa12□□□□□ -0.49
VRK3-213ENST00000597215 PXT1Q8NFP0 134 aa12□□□□□ -0.49
VRK3-213ENST00000597215 OR8B3Q8NGG8 313 aa12□□□□□ -0.49
VRK3-213ENST00000597215 TNFAIP8L1Q8WVP5 186 aa12□□□□□ -0.49
VRK3-213ENST00000597215 SEH1LQ96EE3 360 aa12□□□□□ -0.49
VRK3-213ENST00000597215 NEIL1Q96FI4 390 aaPredicted RBP12□□□□□ -0.49
VRK3-213ENST00000597215 C1orf159Q96HA4 380 aa12□□□□□ -0.49
VRK3-213ENST00000597215 OR8B2Q96RD0 313 aa12□□□□□ -0.49
VRK3-213ENST00000597215 FAM192AQ9GZU8 254 aa12□□□□□ -0.49
VRK3-213ENST00000597215 DNTTIP1Q9H147 329 aa12□□□□□ -0.49
VRK3-213ENST00000597215 PPIL3Q9H2H8 161 aaKnown RBP12□□□□□ -0.49
VRK3-213ENST00000597215 RHOFQ9HBH0 211 aa12□□□□□ -0.49
VRK3-213ENST00000597215 HES4Q9HCC6 221 aa12□□□□□ -0.49
VRK3-213ENST00000597215 EXOSC4Q9NPD3 245 aaKnown RBP12□□□□□ -0.49
VRK3-213ENST00000597215 SNTG1Q9NSN8 517 aa12□□□□□ -0.49
VRK3-213ENST00000597215 SSR3Q9UNL2 185 aa12□□□□□ -0.49
VRK3-213ENST00000597215 MED13LQ71F56 2210 aa11.99□□□□□ -0.49
VRK3-213ENST00000597215 F8P00451 2351 aa11.99□□□□□ -0.49
VRK3-213ENST00000597215 ACANP16112 2415 aa11.99□□□□□ -0.49
VRK3-213ENST00000597215 HIVEP1P15822 2718 aa11.99□□□□□ -0.49
VRK3-213ENST00000597215 OR2AT4A6NND4 320 aa11.99□□□□□ -0.49
VRK3-213ENST00000597215 ADAM20O43506 726 aa11.99□□□□□ -0.49
VRK3-213ENST00000597215 KDM4BO94953 1096 aa11.99□□□□□ -0.49
VRK3-213ENST00000597215 KNG1P01042 644 aa11.99□□□□□ -0.49
VRK3-213ENST00000597215 WNT2P09544 360 aa11.99□□□□□ -0.49
VRK3-213ENST00000597215 BCL3P20749 454 aa11.99□□□□□ -0.49
VRK3-213ENST00000597215 MYL9P24844 172 aa11.99□□□□□ -0.49
VRK3-213ENST00000597215 PTGFRP43088 359 aa11.99□□□□□ -0.49
VRK3-213ENST00000597215 OR3A4PP47883 348 aa11.99□□□□□ -0.49
VRK3-213ENST00000597215 ESCO2Q56NI9 601 aa11.99□□□□□ -0.49
VRK3-213ENST00000597215 GLT8D1Q68CQ7 371 aa11.99□□□□□ -0.49
VRK3-213ENST00000597215 LYPD2Q6UXB3 125 aa11.99□□□□□ -0.49
VRK3-213ENST00000597215 SLC36A1Q7Z2H8 476 aa11.99□□□□□ -0.49
VRK3-213ENST00000597215 BIVMQ86UB2 503 aa11.99□□□□□ -0.49
VRK3-213ENST00000597215 LRRTM1Q86UE6 522 aa11.99□□□□□ -0.49
VRK3-213ENST00000597215 BATF2Q8N1L9 274 aa11.99□□□□□ -0.49
VRK3-213ENST00000597215 OR5T2Q8NGG2 359 aa11.99□□□□□ -0.49
VRK3-213ENST00000597215 ANGPTL6Q8NI99 470 aa11.99□□□□□ -0.49
VRK3-213ENST00000597215 EMG1Q92979 244 aaKnown RBP11.99□□□□□ -0.49
VRK3-213ENST00000597215 FOXRED1Q96CU9 486 aaPredicted RBP11.99□□□□□ -0.49
VRK3-213ENST00000597215 S100A13Q99584 98 aa11.99□□□□□ -0.49
VRK3-213ENST00000597215 KAAG1Q9UBP8 84 aa11.99□□□□□ -0.49
VRK3-213ENST00000597215 IGKV1-12A0A0C4DH73 117 aa11.98□□□□□ -0.49
VRK3-213ENST00000597215 B4DSR2 109 aa11.98□□□□□ -0.49
VRK3-213ENST00000597215 FAM157AC9JC47 383 aa11.98□□□□□ -0.49
VRK3-213ENST00000597215 TNFRSF13BO14836 293 aaPredicted RBP11.98□□□□□ -0.49
VRK3-213ENST00000597215 TMPRSS2O15393 492 aa11.98□□□□□ -0.49
VRK3-213ENST00000597215 IGKV1D-12P01611 117 aa11.98□□□□□ -0.49
VRK3-213ENST00000597215 PSG2P11465 335 aa11.98□□□□□ -0.49
VRK3-213ENST00000597215 ADRA2CP18825 462 aa11.98□□□□□ -0.49
VRK3-213ENST00000597215 FGF9P31371 208 aaPredicted RBP11.98□□□□□ -0.49
VRK3-213ENST00000597215 NPBWR2P48146 333 aa11.98□□□□□ -0.49
VRK3-213ENST00000597215 PITPNBP48739 271 aa11.98□□□□□ -0.49
VRK3-213ENST00000597215 BMXP51813 675 aa11.98□□□□□ -0.49
VRK3-213ENST00000597215 TIMM50Q3ZCQ8 353 aa11.98□□□□□ -0.49
VRK3-213ENST00000597215 ATPAF1Q5TC12 328 aaPredicted RBP11.98□□□□□ -0.49
VRK3-213ENST00000597215 CYB5R2Q6BCY4 276 aa11.98□□□□□ -0.49
VRK3-213ENST00000597215 C22orf42Q6IC83 251 aa11.98□□□□□ -0.49
VRK3-213ENST00000597215 LURAP1LQ8IV03 231 aa11.98□□□□□ -0.49
VRK3-213ENST00000597215 FAM58AQ8N1B3 248 aa11.98□□□□□ -0.49
VRK3-213ENST00000597215 LINC01356Q8N9X3 169 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms