RNA–Protein interactions for RNA: ENST00000597146.1

LIG1-214, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-214ENST00000597146 MPC1Q9Y5U8 109 aa12.48□□□□□ -0.41
LIG1-214ENST00000597146 ZNF850A8MQ14 1090 aa12.47□□□□□ -0.41
LIG1-214ENST00000597146 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.47□□□□□ -0.41
LIG1-214ENST00000597146 M0R129 80 aa12.47□□□□□ -0.41
LIG1-214ENST00000597146 ANOS1P23352 680 aa12.47□□□□□ -0.41
LIG1-214ENST00000597146 LMO1P25800 156 aa12.47□□□□□ -0.41
LIG1-214ENST00000597146 PSMA6P60900 246 aaKnown RBP12.47□□□□□ -0.41
LIG1-214ENST00000597146 CDC42P60953 191 aa12.47□□□□□ -0.41
LIG1-214ENST00000597146 KPNB1Q14974 876 aaKnown RBP12.47□□□□□ -0.41
LIG1-214ENST00000597146 TCTEX1D4Q5JR98 221 aa12.47□□□□□ -0.41
LIG1-214ENST00000597146 ASRGL1Q7L266 308 aa12.47□□□□□ -0.41
LIG1-214ENST00000597146 SLC36A1Q7Z2H8 476 aa12.47□□□□□ -0.41
LIG1-214ENST00000597146 ZNF679Q8IYX0 411 aa12.47□□□□□ -0.41
LIG1-214ENST00000597146 RFKQ969G6 155 aa12.47□□□□□ -0.41
LIG1-214ENST00000597146 DMRTB1Q96MA1 342 aa12.47□□□□□ -0.41
LIG1-214ENST00000597146 ZNF319Q9P2F9 582 aa12.47□□□□□ -0.41
LIG1-214ENST00000597146 SF3B6Q9Y3B4 125 aaKnown RBP12.47□□□□□ -0.41
LIG1-214ENST00000597146 TRBV23-1A0A0A0MS06 115 aa12.46□□□□□ -0.41
LIG1-214ENST00000597146 hCG_38984A0A1B0GV85 526 aa12.46□□□□□ -0.41
LIG1-214ENST00000597146 A0A1W2PQ09 198 aa12.46□□□□□ -0.41
LIG1-214ENST00000597146 CCDC182A6NF36 153 aa12.46□□□□□ -0.41
LIG1-214ENST00000597146 M0R1W7 72 aa12.46□□□□□ -0.41
LIG1-214ENST00000597146 MTRF1O75570 445 aaKnown RBP12.46□□□□□ -0.41
LIG1-214ENST00000597146 EPHA2P29317 976 aa12.46□□□□□ -0.41
LIG1-214ENST00000597146 VDAC2P45880 294 aaPredicted RBP12.46□□□□□ -0.41
LIG1-214ENST00000597146 CXCR4P61073 352 aa12.46□□□□□ -0.41
LIG1-214ENST00000597146 PRDX4Q13162 271 aa12.46□□□□□ -0.41
LIG1-214ENST00000597146 CNN3Q15417 329 aaKnown RBP12.46□□□□□ -0.41
LIG1-214ENST00000597146 MICBQ29980 383 aa12.46□□□□□ -0.41
LIG1-214ENST00000597146 C12orf73Q69YU5 71 aa12.46□□□□□ -0.41
LIG1-214ENST00000597146 ZNF322Q6U7Q0 402 aaPredicted RBP12.46□□□□□ -0.41
LIG1-214ENST00000597146 PRSS45Q7RTY3 260 aa12.46□□□□□ -0.41
LIG1-214ENST00000597146 WDR86Q86TI4 376 aa12.46□□□□□ -0.41
LIG1-214ENST00000597146 LINC00482Q8N8I6 264 aa12.46□□□□□ -0.41
LIG1-214ENST00000597146 OR5AU1Q8NGC0 362 aa12.46□□□□□ -0.41
LIG1-214ENST00000597146 OR8B12Q8NGG6 310 aa12.46□□□□□ -0.41
LIG1-214ENST00000597146 OR8B4Q96RC9 309 aa12.46□□□□□ -0.41
LIG1-214ENST00000597146 APOL4Q9BPW4 351 aa12.46□□□□□ -0.41
LIG1-214ENST00000597146 ADI1Q9BV57 179 aa12.46□□□□□ -0.41
LIG1-214ENST00000597146 PBOV1Q9GZY1 135 aa12.46□□□□□ -0.41
LIG1-214ENST00000597146 ELL3Q9HB65 397 aaPredicted RBP12.46□□□□□ -0.41
LIG1-214ENST00000597146 WARS2Q9UGM6 360 aaKnown RBP12.46□□□□□ -0.41
LIG1-214ENST00000597146 LOC110117498-PIK3R3F6TDL0 507 aa12.45□□□□□ -0.42
LIG1-214ENST00000597146 SYNGR1O43759 233 aa12.45□□□□□ -0.42
LIG1-214ENST00000597146 KRT8P05787 483 aa12.45□□□□□ -0.42
LIG1-214ENST00000597146 MUC1P15941 1255 aaPredicted RBP12.45□□□□□ -0.42
LIG1-214ENST00000597146 DCTDP32321 178 aa12.45□□□□□ -0.42
LIG1-214ENST00000597146 POLR2IP36954 125 aaKnown RBP12.45□□□□□ -0.42
LIG1-214ENST00000597146 RAB13P51153 203 aa12.45□□□□□ -0.42
LIG1-214ENST00000597146 GMFBP60983 142 aa12.45□□□□□ -0.42
LIG1-214ENST00000597146 CSNK2BP67870 215 aa12.45□□□□□ -0.42
LIG1-214ENST00000597146 RIPPLY1Q0D2K3 151 aa12.45□□□□□ -0.42
LIG1-214ENST00000597146 LRRC10Q5BKY1 277 aa12.45□□□□□ -0.42
LIG1-214ENST00000597146 BCL2L15Q5TBC7 163 aa12.45□□□□□ -0.42
LIG1-214ENST00000597146 AADACL4Q5VUY2 407 aa12.45□□□□□ -0.42
LIG1-214ENST00000597146 MOB3CQ70IA8 216 aa12.45□□□□□ -0.42
LIG1-214ENST00000597146 ZDHHC23Q8IYP9 409 aa12.45□□□□□ -0.42
LIG1-214ENST00000597146 YIPF7Q8N8F6 280 aa12.45□□□□□ -0.42
LIG1-214ENST00000597146 OR1M1Q8NGA1 313 aa12.45□□□□□ -0.42
LIG1-214ENST00000597146 OR5T2Q8NGG2 359 aa12.45□□□□□ -0.42
LIG1-214ENST00000597146 OR8J1Q8NGP2 316 aa12.45□□□□□ -0.42
LIG1-214ENST00000597146 TBX5Q99593 518 aa12.45□□□□□ -0.42
LIG1-214ENST00000597146 PRSS22Q9GZN4 317 aa12.45□□□□□ -0.42
LIG1-214ENST00000597146 RNPEPL1Q9HAU8 725 aa12.45□□□□□ -0.42
LIG1-214ENST00000597146 CLN6Q9NWW5 311 aa12.45□□□□□ -0.42
LIG1-214ENST00000597146 TCF19Q9Y242 345 aa12.45□□□□□ -0.42
LIG1-214ENST00000597146 HERC2O95714 4834 aa12.45□□□□□ -0.42
LIG1-214ENST00000597146 TCRBV4S1A1TA0A5B7 111 aa12.44□□□□□ -0.42
LIG1-214ENST00000597146 CDIPTO14735 213 aa12.44□□□□□ -0.42
LIG1-214ENST00000597146 RPP14O95059 124 aaKnown RBP12.44□□□□□ -0.42
LIG1-214ENST00000597146 BAG2O95816 211 aa12.44□□□□□ -0.42
LIG1-214ENST00000597146 CST4P01036 141 aa12.44□□□□□ -0.42
LIG1-214ENST00000597146 ATP6V1B1P15313 513 aa12.44□□□□□ -0.42
LIG1-214ENST00000597146 TGM4P49221 684 aa12.44□□□□□ -0.42
LIG1-214ENST00000597146 ROM1Q03395 351 aa12.44□□□□□ -0.42
LIG1-214ENST00000597146 ZIK1Q3SY52 487 aaPredicted RBP12.44□□□□□ -0.42
LIG1-214ENST00000597146 C11orf53Q8IXP5 236 aa12.44□□□□□ -0.42
LIG1-214ENST00000597146 DYNAPQ8N1N2 210 aa12.44□□□□□ -0.42
LIG1-214ENST00000597146 OR10H4Q8NGA5 316 aa12.44□□□□□ -0.42
LIG1-214ENST00000597146 OR51E1Q8TCB6 317 aa12.44□□□□□ -0.42
LIG1-214ENST00000597146 ITFG2Q969R8 447 aa12.44□□□□□ -0.42
LIG1-214ENST00000597146 GPR84Q9NQS5 396 aa12.44□□□□□ -0.42
LIG1-214ENST00000597146 A0A0U1RQV5 110 aa12.43□□□□□ -0.42
LIG1-214ENST00000597146 TMEM210A6NLX4 147 aa12.43□□□□□ -0.42
LIG1-214ENST00000597146 SNTNA6NMZ2 147 aa12.43□□□□□ -0.42
LIG1-214ENST00000597146 H0YAE9 185 aa12.43□□□□□ -0.42
LIG1-214ENST00000597146 OR2T7P0C7T2 308 aa12.43□□□□□ -0.42
LIG1-214ENST00000597146 HTR1FP30939 366 aa12.43□□□□□ -0.42
LIG1-214ENST00000597146 BLCAPP62952 87 aa12.43□□□□□ -0.42
LIG1-214ENST00000597146 BLMHQ13867 455 aa12.43□□□□□ -0.42
LIG1-214ENST00000597146 KHDC1LQ5JSQ8 128 aa12.43□□□□□ -0.42
LIG1-214ENST00000597146 STUMQ69YW2 141 aa12.43□□□□□ -0.42
LIG1-214ENST00000597146 LHFPL4Q7Z7J7 247 aa12.43□□□□□ -0.42
LIG1-214ENST00000597146 OR2T27Q8NH04 317 aa12.43□□□□□ -0.42
LIG1-214ENST00000597146 ZNF671Q8TAW3 534 aa12.43□□□□□ -0.42
LIG1-214ENST00000597146 TRUB1Q8WWH5 349 aaKnown RBP12.43□□□□□ -0.42
LIG1-214ENST00000597146 OR5P3Q8WZ94 311 aa12.43□□□□□ -0.42
LIG1-214ENST00000597146 RPL3LQ92901 407 aaKnown RBP12.43□□□□□ -0.42
LIG1-214ENST00000597146 STMN2Q93045 179 aa12.43□□□□□ -0.42
LIG1-214ENST00000597146 MYDGFQ969H8 173 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms