RNA–Protein interactions for RNA: ENST00000596938.1

CCDC9-203, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 457 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-203ENST00000596938 BLMHQ13867 455 aa8.63□□□□□ -1.03
CCDC9-203ENST00000596938 ODF4Q2M2E3 257 aa8.63□□□□□ -1.03
CCDC9-203ENST00000596938 NCR3LG1Q68D85 454 aa8.63□□□□□ -1.03
CCDC9-203ENST00000596938 SHISA2Q6UWI4 295 aa8.63□□□□□ -1.03
CCDC9-203ENST00000596938 CALHM1Q8IU99 346 aa8.63□□□□□ -1.03
CCDC9-203ENST00000596938 RDH10Q8IZV5 341 aa8.63□□□□□ -1.03
CCDC9-203ENST00000596938 DNAAF1Q8NEP3 725 aa8.63□□□□□ -1.03
CCDC9-203ENST00000596938 OR5D13Q8NGL4 314 aa8.63□□□□□ -1.03
CCDC9-203ENST00000596938 LGALS12Q96DT0 336 aa8.63□□□□□ -1.03
CCDC9-203ENST00000596938 MRPL48Q96GC5 212 aaKnown RBP8.63□□□□□ -1.03
CCDC9-203ENST00000596938 CHST5Q9GZS9 411 aa8.63□□□□□ -1.03
CCDC9-203ENST00000596938 SEBOXQ9HB31 216 aaPredicted RBP8.63□□□□□ -1.03
CCDC9-203ENST00000596938 MRPS18AQ9NVS2 196 aaKnown RBP8.63□□□□□ -1.03
CCDC9-203ENST00000596938 FAM118AQ9NWS6 357 aa8.63□□□□□ -1.03
CCDC9-203ENST00000596938 FAM96BQ9Y3D0 163 aa8.63□□□□□ -1.03
CCDC9-203ENST00000596938 MMP24Q9Y5R2 645 aa8.63□□□□□ -1.03
CCDC9-203ENST00000596938 A0A1B0GUS0 222 aa8.62□□□□□ -1.03
CCDC9-203ENST00000596938 LOC107986453A0A1B0GWG9 222 aa8.62□□□□□ -1.03
CCDC9-203ENST00000596938 A0A1W2PPH5 198 aa8.62□□□□□ -1.03
CCDC9-203ENST00000596938 FAM230AA0A1W2PPH8 454 aa8.62□□□□□ -1.03
CCDC9-203ENST00000596938 A0A1W2PQ09 198 aa8.62□□□□□ -1.03
CCDC9-203ENST00000596938 NPFFO15130 113 aa8.62□□□□□ -1.03
CCDC9-203ENST00000596938 CRYBA1P05813 215 aa8.62□□□□□ -1.03
CCDC9-203ENST00000596938 RPSAP08865 295 aaKnown RBP8.62□□□□□ -1.03
CCDC9-203ENST00000596938 EEF1B2P24534 225 aaKnown RBP8.62□□□□□ -1.03
CCDC9-203ENST00000596938 ACTA2P62736 377 aa8.62□□□□□ -1.03
CCDC9-203ENST00000596938 ACTG2P63267 376 aa8.62□□□□□ -1.03
CCDC9-203ENST00000596938 GALEQ14376 348 aa8.62□□□□□ -1.03
CCDC9-203ENST00000596938 TMEM200BQ69YZ2 307 aa8.62□□□□□ -1.03
CCDC9-203ENST00000596938 UTS2BQ765I0 119 aa8.62□□□□□ -1.03
CCDC9-203ENST00000596938 PDZD9Q8IXQ8 264 aa8.62□□□□□ -1.03
CCDC9-203ENST00000596938 ENTHD1Q8IYW4 607 aa8.62□□□□□ -1.03
CCDC9-203ENST00000596938 SYS1Q8N2H4 156 aa8.62□□□□□ -1.03
CCDC9-203ENST00000596938 TMEM185AQ8NFB2 350 aa8.62□□□□□ -1.03
CCDC9-203ENST00000596938 DYRK2Q92630 601 aa8.62□□□□□ -1.03
CCDC9-203ENST00000596938 CEP19Q96LK0 163 aa8.62□□□□□ -1.03
CCDC9-203ENST00000596938 CHIAQ9BZP6 476 aa8.62□□□□□ -1.03
CCDC9-203ENST00000596938 FAM234AQ9H0X4 552 aa8.62□□□□□ -1.03
CCDC9-203ENST00000596938 DPAGT1Q9H3H5 408 aa8.62□□□□□ -1.03
CCDC9-203ENST00000596938 SIRT7Q9NRC8 400 aa8.62□□□□□ -1.03
CCDC9-203ENST00000596938 MTCH1Q9NZJ7 389 aa8.62□□□□□ -1.03
CCDC9-203ENST00000596938 AASSQ9UDR5 926 aa8.62□□□□□ -1.03
CCDC9-203ENST00000596938 SF3B6Q9Y3B4 125 aaKnown RBP8.62□□□□□ -1.03
CCDC9-203ENST00000596938 IGKV1-27A0A075B6S5 117 aa8.61□□□□□ -1.03
CCDC9-203ENST00000596938 H0YAE9 185 aa8.61□□□□□ -1.03
CCDC9-203ENST00000596938 H3BSH0 61 aa8.61□□□□□ -1.03
CCDC9-203ENST00000596938 J3QLW9 94 aa8.61□□□□□ -1.03
CCDC9-203ENST00000596938 K7N7A8 449 aa8.61□□□□□ -1.03
CCDC9-203ENST00000596938 NDUFA7O95182 113 aa8.61□□□□□ -1.03
CCDC9-203ENST00000596938 FADS2O95864 444 aaKnown RBP8.61□□□□□ -1.03
CCDC9-203ENST00000596938 IGHV4-59P01825 116 aa8.61□□□□□ -1.03
CCDC9-203ENST00000596938 TK1P04183 234 aa8.61□□□□□ -1.03
CCDC9-203ENST00000596938 CHRM2P08172 466 aa8.61□□□□□ -1.03
CCDC9-203ENST00000596938 HTR1AP08908 422 aa8.61□□□□□ -1.03
CCDC9-203ENST00000596938 FBP1P09467 338 aa8.61□□□□□ -1.03
CCDC9-203ENST00000596938 DBTP11182 482 aaKnown RBP8.61□□□□□ -1.03
CCDC9-203ENST00000596938 ZNF19P17023 458 aa8.61□□□□□ -1.03
CCDC9-203ENST00000596938 PRKACBP22694 351 aa8.61□□□□□ -1.03
CCDC9-203ENST00000596938 RBP2P50120 134 aa8.61□□□□□ -1.03
CCDC9-203ENST00000596938 CAPZA1P52907 286 aa8.61□□□□□ -1.03
CCDC9-203ENST00000596938 ATP1B3P54709 279 aa8.61□□□□□ -1.03
CCDC9-203ENST00000596938 NANOS3P60323 173 aaKnown RBP8.61□□□□□ -1.03
CCDC9-203ENST00000596938 RPL31P62899 125 aaKnown RBP8.61□□□□□ -1.03
CCDC9-203ENST00000596938 ZNF91Q05481 1191 aa8.61□□□□□ -1.03
CCDC9-203ENST00000596938 RAB40BQ12829 278 aa8.61□□□□□ -1.03
CCDC9-203ENST00000596938 CNN3Q15417 329 aaKnown RBP8.61□□□□□ -1.03
CCDC9-203ENST00000596938 FIP1L1Q6UN15 594 aaKnown RBP8.61□□□□□ -1.03
CCDC9-203ENST00000596938 MKXQ8IYA7 352 aa8.61□□□□□ -1.03
CCDC9-203ENST00000596938 Q8IYB0 196 aa8.61□□□□□ -1.03
CCDC9-203ENST00000596938 C11orf42Q8N5U0 333 aa8.61□□□□□ -1.03
CCDC9-203ENST00000596938 OR4F5Q8NH21 305 aa8.61□□□□□ -1.03
CCDC9-203ENST00000596938 TRMT10AQ8TBZ6 339 aaKnown RBP8.61□□□□□ -1.03
CCDC9-203ENST00000596938 FGGYQ96C11 551 aa8.61□□□□□ -1.03
CCDC9-203ENST00000596938 ADAT3Q96EY9 351 aaPredicted RBP8.61□□□□□ -1.03
CCDC9-203ENST00000596938 PELI1Q96FA3 418 aa8.61□□□□□ -1.03
CCDC9-203ENST00000596938 BORCS8Q96FH0 119 aa8.61□□□□□ -1.03
CCDC9-203ENST00000596938 RDH12Q96NR8 316 aa8.61□□□□□ -1.03
CCDC9-203ENST00000596938 ZNF649Q9BS31 505 aa8.61□□□□□ -1.03
CCDC9-203ENST00000596938 SLITRK2Q9H156 845 aa8.61□□□□□ -1.03
CCDC9-203ENST00000596938 ELL3Q9HB65 397 aaPredicted RBP8.61□□□□□ -1.03
CCDC9-203ENST00000596938 INPP5EQ9NRR6 644 aa8.61□□□□□ -1.03
CCDC9-203ENST00000596938 TNFRSF19Q9NS68 423 aa8.61□□□□□ -1.03
CCDC9-203ENST00000596938 C19orf12Q9NSK7 152 aa8.61□□□□□ -1.03
CCDC9-203ENST00000596938 C1RLQ9NZP8 487 aa8.61□□□□□ -1.03
CCDC9-203ENST00000596938 HHLA2Q9UM44 414 aa8.61□□□□□ -1.03
CCDC9-203ENST00000596938 RPL36Q9Y3U8 105 aaKnown RBP8.61□□□□□ -1.03
CCDC9-203ENST00000596938 DOCK11Q5JSL3 2073 aa8.6□□□□□ -1.03
CCDC9-203ENST00000596938 IGKV1-9A0A0C4DH69 117 aa8.6□□□□□ -1.03
CCDC9-203ENST00000596938 hCG_1809904A0A1W2PP81 198 aa8.6□□□□□ -1.03
CCDC9-203ENST00000596938 A0A1W2PPE2 198 aa8.6□□□□□ -1.03
CCDC9-203ENST00000596938 A0A1W2PR64 198 aa8.6□□□□□ -1.03
CCDC9-203ENST00000596938 A0A1W2PRV1 198 aa8.6□□□□□ -1.03
CCDC9-203ENST00000596938 OR4C45A6NMZ5 311 aa8.6□□□□□ -1.03
CCDC9-203ENST00000596938 F8VVB4 439 aa8.6□□□□□ -1.03
CCDC9-203ENST00000596938 F8VWA3 439 aa8.6□□□□□ -1.03
CCDC9-203ENST00000596938 BAG2O95816 211 aa8.6□□□□□ -1.03
CCDC9-203ENST00000596938 IGHA1P01876 353 aa8.6□□□□□ -1.03
CCDC9-203ENST00000596938 MT-ND2P03891 347 aa8.6□□□□□ -1.03
CCDC9-203ENST00000596938 ATF1P18846 271 aa8.6□□□□□ -1.03
CCDC9-203ENST00000596938 MDKP21741 143 aaPredicted RBP8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms