RNA–Protein interactions for RNA: ENST00000596104.5

LIG1-209, Transcript of DNA ligase 1, humanhuman

TSL 3

Gene LIG1, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-209ENST00000596104 MINOS1Q5TGZ0 78 aa7.98□□□□□ -1.13
LIG1-209ENST00000596104 LCN1P1Q5VSP4 162 aa7.98□□□□□ -1.13
LIG1-209ENST00000596104 CPOQ8IVL8 374 aa7.98□□□□□ -1.13
LIG1-209ENST00000596104 DEFB107AQ8IZN7 70 aa7.98□□□□□ -1.13
LIG1-209ENST00000596104 BATF2Q8N1L9 274 aa7.98□□□□□ -1.13
LIG1-209ENST00000596104 BBS1Q8NFJ9 593 aa7.98□□□□□ -1.13
LIG1-209ENST00000596104 RCC1LQ96I51 464 aaKnown RBP7.98□□□□□ -1.13
LIG1-209ENST00000596104 FEVQ99581 238 aa7.98□□□□□ -1.13
LIG1-209ENST00000596104 YIPF3Q9GZM5 350 aa7.98□□□□□ -1.13
LIG1-209ENST00000596104 PBOV1Q9GZY1 135 aa7.98□□□□□ -1.13
LIG1-209ENST00000596104 INPP5EQ9NRR6 644 aa7.98□□□□□ -1.13
LIG1-209ENST00000596104 OR14J1Q9UGF5 321 aa7.98□□□□□ -1.13
LIG1-209ENST00000596104 NUFIP1Q9UHK0 495 aaKnown RBP7.98□□□□□ -1.13
LIG1-209ENST00000596104 ENPP5Q9UJA9 477 aa7.98□□□□□ -1.13
LIG1-209ENST00000596104 LAMP5Q9UJQ1 280 aa7.98□□□□□ -1.13
LIG1-209ENST00000596104 PIGLQ9Y2B2 252 aa7.98□□□□□ -1.13
LIG1-209ENST00000596104 POLDIP2Q9Y2S7 368 aa7.98□□□□□ -1.13
LIG1-209ENST00000596104 HILPDAQ9Y5L2 63 aa7.98□□□□□ -1.13
LIG1-209ENST00000596104 MINOS1-NBL1R4GNA1 71 aa7.98□□□□□ -1.13
LIG1-209ENST00000596104 ARRDC5A6NEK1 342 aa7.97□□□□□ -1.13
LIG1-209ENST00000596104 GSC2O15499 205 aa7.97□□□□□ -1.13
LIG1-209ENST00000596104 SNX3O60493 162 aa7.97□□□□□ -1.13
LIG1-209ENST00000596104 DHRS3O75911 302 aa7.97□□□□□ -1.13
LIG1-209ENST00000596104 DUS4LO95620 317 aaKnown RBP7.97□□□□□ -1.13
LIG1-209ENST00000596104 TTRP02766 147 aa7.97□□□□□ -1.13
LIG1-209ENST00000596104 PF4P02776 101 aa7.97□□□□□ -1.13
LIG1-209ENST00000596104 OR12D2P58182 307 aa7.97□□□□□ -1.13
LIG1-209ENST00000596104 ACTA2P62736 377 aa7.97□□□□□ -1.13
LIG1-209ENST00000596104 ACTG2P63267 376 aa7.97□□□□□ -1.13
LIG1-209ENST00000596104 ACTC1P68032 377 aa7.97□□□□□ -1.13
LIG1-209ENST00000596104 ACTA1P68133 377 aa7.97□□□□□ -1.13
LIG1-209ENST00000596104 COL10A1Q03692 680 aa7.97□□□□□ -1.13
LIG1-209ENST00000596104 SLC34A1Q06495 639 aa7.97□□□□□ -1.13
LIG1-209ENST00000596104 MFGE8Q08431 387 aaPredicted RBP7.97□□□□□ -1.13
LIG1-209ENST00000596104 DYNC1I2Q13409 638 aaKnown RBP7.97□□□□□ -1.13
LIG1-209ENST00000596104 GINS1Q14691 196 aa7.97□□□□□ -1.13
LIG1-209ENST00000596104 DEFB121Q5J5C9 76 aa7.97□□□□□ -1.13
LIG1-209ENST00000596104 SLC35D3Q5M8T2 416 aa7.97□□□□□ -1.13
LIG1-209ENST00000596104 CLVS2Q5SYC1 327 aa7.97□□□□□ -1.13
LIG1-209ENST00000596104 KCTD18Q6PI47 426 aaPredicted RBP7.97□□□□□ -1.13
LIG1-209ENST00000596104 CCDC121Q6ZUS5 278 aa7.97□□□□□ -1.13
LIG1-209ENST00000596104 COMMD2Q86X83 199 aa7.97□□□□□ -1.13
LIG1-209ENST00000596104 MYDGFQ969H8 173 aa7.97□□□□□ -1.13
LIG1-209ENST00000596104 WWC2-AS2Q96NR7 200 aa7.97□□□□□ -1.13
LIG1-209ENST00000596104 GPR173Q9NS66 373 aa7.97□□□□□ -1.13
LIG1-209ENST00000596104 ARL8BQ9NVJ2 186 aa7.97□□□□□ -1.13
LIG1-209ENST00000596104 TAGLN3Q9UI15 199 aa7.97□□□□□ -1.13
LIG1-209ENST00000596104 SLC22A13Q9Y226 551 aa7.97□□□□□ -1.13
LIG1-209ENST00000596104 TSSC4Q9Y5U2 329 aaPredicted RBP7.97□□□□□ -1.13
LIG1-209ENST00000596104 DNAH9Q9NYC9 4486 aa7.97□□□□□ -1.13
LIG1-209ENST00000596104 IGHV2-26A0A0B4J1V2 119 aa7.96□□□□□ -1.14
LIG1-209ENST00000596104 A0A1B0GTI1 187 aa7.96□□□□□ -1.14
LIG1-209ENST00000596104 TCRBV4S1A1TA0A5B7 111 aa7.96□□□□□ -1.14
LIG1-209ENST00000596104 TMEM82A0PJX8 343 aa7.96□□□□□ -1.14
LIG1-209ENST00000596104 F8VVB4 439 aa7.96□□□□□ -1.14
LIG1-209ENST00000596104 F8VWA3 439 aa7.96□□□□□ -1.14
LIG1-209ENST00000596104 DLGAP1O14490 977 aa7.96□□□□□ -1.14
LIG1-209ENST00000596104 ZNF254O75437 659 aa7.96□□□□□ -1.14
LIG1-209ENST00000596104 SRSF10O75494 262 aaKnown RBP7.96□□□□□ -1.14
LIG1-209ENST00000596104 HMGN1P05114 100 aa7.96□□□□□ -1.14
LIG1-209ENST00000596104 HOXD3P31249 432 aaPredicted RBP7.96□□□□□ -1.14
LIG1-209ENST00000596104 EDDM3BP56851 147 aa7.96□□□□□ -1.14
LIG1-209ENST00000596104 CDK5Q00535 292 aa7.96□□□□□ -1.14
LIG1-209ENST00000596104 MEF2CQ06413 473 aaPredicted RBP7.96□□□□□ -1.14
LIG1-209ENST00000596104 IL24Q13007 206 aa7.96□□□□□ -1.14
LIG1-209ENST00000596104 GK3PQ14409 553 aa7.96□□□□□ -1.14
LIG1-209ENST00000596104 ZNF829Q3KNS6 432 aaPredicted RBP7.96□□□□□ -1.14
LIG1-209ENST00000596104 C10orf99Q6UWK7 81 aa7.96□□□□□ -1.14
LIG1-209ENST00000596104 C16orf89Q6UX73 402 aa7.96□□□□□ -1.14
LIG1-209ENST00000596104 Q6ZSR3 168 aa7.96□□□□□ -1.14
LIG1-209ENST00000596104 ASRGL1Q7L266 308 aa7.96□□□□□ -1.14
LIG1-209ENST00000596104 CENPVQ7Z7K6 275 aaPredicted RBP7.96□□□□□ -1.14
LIG1-209ENST00000596104 ANGPTL5Q86XS5 388 aa7.96□□□□□ -1.14
LIG1-209ENST00000596104 ZNF679Q8IYX0 411 aa7.96□□□□□ -1.14
LIG1-209ENST00000596104 OR8H2Q8N162 312 aa7.96□□□□□ -1.14
LIG1-209ENST00000596104 LINC00482Q8N8I6 264 aa7.96□□□□□ -1.14
LIG1-209ENST00000596104 ASCC1Q8N9N2 400 aaKnown RBP7.96□□□□□ -1.14
LIG1-209ENST00000596104 OR14K1Q8NGZ2 314 aa7.96□□□□□ -1.14
LIG1-209ENST00000596104 GIPC3Q8TF64 312 aa7.96□□□□□ -1.14
LIG1-209ENST00000596104 ZNF714Q96N38 554 aa7.96□□□□□ -1.14
LIG1-209ENST00000596104 B9D2Q9BPU9 175 aa7.96□□□□□ -1.14
LIG1-209ENST00000596104 MROQ9BYG7 248 aa7.96□□□□□ -1.14
LIG1-209ENST00000596104 PKIBQ9C010 78 aa7.96□□□□□ -1.14
LIG1-209ENST00000596104 DNAJB9Q9UBS3 223 aa7.96□□□□□ -1.14
LIG1-209ENST00000596104 COPS3Q9UNS2 423 aa7.96□□□□□ -1.14
LIG1-209ENST00000596104 V9GYS6 101 aa7.96□□□□□ -1.14
LIG1-209ENST00000596104 CCDC182A6NF36 153 aa7.95□□□□□ -1.14
LIG1-209ENST00000596104 MMP23AO75900 390 aa7.95□□□□□ -1.14
LIG1-209ENST00000596104 AMY1AP04745 511 aa7.95□□□□□ -1.14
LIG1-209ENST00000596104 AMY2AP04746 511 aa7.95□□□□□ -1.14
LIG1-209ENST00000596104 LPLP06858 475 aa7.95□□□□□ -1.14
LIG1-209ENST00000596104 CHRM2P08172 466 aa7.95□□□□□ -1.14
LIG1-209ENST00000596104 MRPL3P09001 348 aaKnown RBP7.95□□□□□ -1.14
LIG1-209ENST00000596104 RIDAP52758 137 aaKnown RBP7.95□□□□□ -1.14
LIG1-209ENST00000596104 RPS7P62081 194 aaKnown RBP7.95□□□□□ -1.14
LIG1-209ENST00000596104 MS4A2Q01362 244 aa7.95□□□□□ -1.14
LIG1-209ENST00000596104 CD69Q07108 199 aa7.95□□□□□ -1.14
LIG1-209ENST00000596104 APOFQ13790 326 aa7.95□□□□□ -1.14
LIG1-209ENST00000596104 FAM98BQ52LJ0 330 aaKnown RBP7.95□□□□□ -1.14
LIG1-209ENST00000596104 ETV3LQ6ZN32 361 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms