RNA–Protein interactions for RNA: ENST00000595945.5

SHKBP1-211, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-211ENST00000595945 BANF2Q9H503 90 aa12.49□□□□□ -0.41
SHKBP1-211ENST00000595945 RHOFQ9HBH0 211 aa12.49□□□□□ -0.41
SHKBP1-211ENST00000595945 ZDHHC8Q9ULC8 765 aa12.49□□□□□ -0.41
SHKBP1-211ENST00000595945 A0A0G2JMP0 313 aa12.48□□□□□ -0.41
SHKBP1-211ENST00000595945 A0A0X1KG70 313 aa12.48□□□□□ -0.41
SHKBP1-211ENST00000595945 FAM221AA4D161 298 aa12.48□□□□□ -0.41
SHKBP1-211ENST00000595945 A6NNC1 897 aa12.48□□□□□ -0.41
SHKBP1-211ENST00000595945 C17orf100A8MU93 164 aa12.48□□□□□ -0.41
SHKBP1-211ENST00000595945 AKR7A2O43488 359 aa12.48□□□□□ -0.41
SHKBP1-211ENST00000595945 XRCC3O43542 346 aa12.48□□□□□ -0.41
SHKBP1-211ENST00000595945 SPRY3O43610 288 aa12.48□□□□□ -0.41
SHKBP1-211ENST00000595945 RHBDL1O75783 438 aa12.48□□□□□ -0.41
SHKBP1-211ENST00000595945 HTR3BO95264 441 aa12.48□□□□□ -0.41
SHKBP1-211ENST00000595945 HLA-DQB1P01920 261 aa12.48□□□□□ -0.41
SHKBP1-211ENST00000595945 PGA5P0DJD9 388 aa12.48□□□□□ -0.41
SHKBP1-211ENST00000595945 BCL3P20749 454 aa12.48□□□□□ -0.41
SHKBP1-211ENST00000595945 SERPINA2P20848 420 aa12.48□□□□□ -0.41
SHKBP1-211ENST00000595945 GATA4P43694 442 aa12.48□□□□□ -0.41
SHKBP1-211ENST00000595945 NPBWR2P48146 333 aa12.48□□□□□ -0.41
SHKBP1-211ENST00000595945 ERVK11-1P61568 191 aa12.48□□□□□ -0.41
SHKBP1-211ENST00000595945 SPRNQ5BIV9 151 aa12.48□□□□□ -0.41
SHKBP1-211ENST00000595945 NHLRC3Q5JS37 347 aa12.48□□□□□ -0.41
SHKBP1-211ENST00000595945 PYHIN1Q6K0P9 492 aa12.48□□□□□ -0.41
SHKBP1-211ENST00000595945 DTX3Q8N9I9 347 aa12.48□□□□□ -0.41
SHKBP1-211ENST00000595945 OR4M2Q8NGB6 313 aa12.48□□□□□ -0.41
SHKBP1-211ENST00000595945 ZFAND2BQ8WV99 257 aa12.48□□□□□ -0.41
SHKBP1-211ENST00000595945 BORCS5Q969J3 196 aa12.48□□□□□ -0.41
SHKBP1-211ENST00000595945 MRPS24Q96EL2 167 aaKnown RBP12.48□□□□□ -0.41
SHKBP1-211ENST00000595945 POM121Q96HA1 1249 aa12.48□□□□□ -0.41
SHKBP1-211ENST00000595945 NUDT16L1Q9BRJ7 211 aaKnown RBP12.48□□□□□ -0.41
SHKBP1-211ENST00000595945 NICN1Q9BSH3 213 aa12.48□□□□□ -0.41
SHKBP1-211ENST00000595945 ELL3Q9HB65 397 aaPredicted RBP12.48□□□□□ -0.41
SHKBP1-211ENST00000595945 DIABLOQ9NR28 239 aa12.48□□□□□ -0.41
SHKBP1-211ENST00000595945 PCDHB16Q9NRJ7 776 aa12.48□□□□□ -0.41
SHKBP1-211ENST00000595945 METTL21EPA6NDL7 271 aa12.47□□□□□ -0.41
SHKBP1-211ENST00000595945 PRSS44E7EML9 344 aa12.47□□□□□ -0.41
SHKBP1-211ENST00000595945 F8VVB4 439 aa12.47□□□□□ -0.41
SHKBP1-211ENST00000595945 F8VWA3 439 aa12.47□□□□□ -0.41
SHKBP1-211ENST00000595945 TRAPPC2LH3BP13 241 aa12.47□□□□□ -0.41
SHKBP1-211ENST00000595945 J3QKU1 62 aa12.47□□□□□ -0.41
SHKBP1-211ENST00000595945 M0R233 179 aa12.47□□□□□ -0.41
SHKBP1-211ENST00000595945 CDIPTO14735 213 aa12.47□□□□□ -0.41
SHKBP1-211ENST00000595945 HS3ST1O14792 307 aa12.47□□□□□ -0.41
SHKBP1-211ENST00000595945 SCGNO76038 276 aa12.47□□□□□ -0.41
SHKBP1-211ENST00000595945 CYB5AP00167 134 aa12.47□□□□□ -0.41
SHKBP1-211ENST00000595945 GRPP07492 148 aa12.47□□□□□ -0.41
SHKBP1-211ENST00000595945 CHRM2P08172 466 aa12.47□□□□□ -0.41
SHKBP1-211ENST00000595945 CFHR2P36980 270 aa12.47□□□□□ -0.41
SHKBP1-211ENST00000595945 PITPNBP48739 271 aa12.47□□□□□ -0.41
SHKBP1-211ENST00000595945 SRP9P49458 86 aaKnown RBP12.47□□□□□ -0.41
SHKBP1-211ENST00000595945 TAS2R20P59543 309 aa12.47□□□□□ -0.41
SHKBP1-211ENST00000595945 FGF12P61328 243 aa12.47□□□□□ -0.41
SHKBP1-211ENST00000595945 MADCAM1Q13477 382 aa12.47□□□□□ -0.41
SHKBP1-211ENST00000595945 IL18Q14116 193 aa12.47□□□□□ -0.41
SHKBP1-211ENST00000595945 MPPED2Q15777 294 aa12.47□□□□□ -0.41
SHKBP1-211ENST00000595945 FAM189A2Q15884 450 aa12.47□□□□□ -0.41
SHKBP1-211ENST00000595945 MOGAT2Q3SYC2 334 aa12.47□□□□□ -0.41
SHKBP1-211ENST00000595945 RAB12Q6IQ22 244 aa12.47□□□□□ -0.41
SHKBP1-211ENST00000595945 WDR82Q6UXN9 313 aa12.47□□□□□ -0.41
SHKBP1-211ENST00000595945 IZUMO1Q8IYV9 350 aa12.47□□□□□ -0.41
SHKBP1-211ENST00000595945 FBXL14Q8N1E6 418 aa12.47□□□□□ -0.41
SHKBP1-211ENST00000595945 OSR2Q8N2R0 312 aa12.47□□□□□ -0.41
SHKBP1-211ENST00000595945 GDPD1Q8N9F7 314 aa12.47□□□□□ -0.41
SHKBP1-211ENST00000595945 POC1AQ8NBT0 407 aa12.47□□□□□ -0.41
SHKBP1-211ENST00000595945 OR51T1Q8NGJ9 327 aa12.47□□□□□ -0.41
SHKBP1-211ENST00000595945 ITLN1Q8WWA0 313 aa12.47□□□□□ -0.41
SHKBP1-211ENST00000595945 OR2V2Q96R30 315 aa12.47□□□□□ -0.41
SHKBP1-211ENST00000595945 ABHD1Q96SE0 405 aa12.47□□□□□ -0.41
SHKBP1-211ENST00000595945 NRIP2Q9BQI9 281 aa12.47□□□□□ -0.41
SHKBP1-211ENST00000595945 URM1Q9BTM9 101 aaKnown RBP12.47□□□□□ -0.41
SHKBP1-211ENST00000595945 IL19Q9UHD0 177 aa12.47□□□□□ -0.41
SHKBP1-211ENST00000595945 POLDIP2Q9Y2S7 368 aa12.47□□□□□ -0.41
SHKBP1-211ENST00000595945 CTDSPLO15194 276 aa12.46□□□□□ -0.41
SHKBP1-211ENST00000595945 CSTBP04080 98 aaKnown RBP12.46□□□□□ -0.41
SHKBP1-211ENST00000595945 GTF2F2P13984 249 aa12.46□□□□□ -0.41
SHKBP1-211ENST00000595945 PMELP40967 661 aa12.46□□□□□ -0.41
SHKBP1-211ENST00000595945 VEGFCP49767 419 aa12.46□□□□□ -0.41
SHKBP1-211ENST00000595945 TMEM50BP56557 158 aa12.46□□□□□ -0.41
SHKBP1-211ENST00000595945 TNFAIP6P98066 277 aaPredicted RBP12.46□□□□□ -0.41
SHKBP1-211ENST00000595945 TMEM69Q5SWH9 247 aa12.46□□□□□ -0.41
SHKBP1-211ENST00000595945 DNM1P46Q6ZS02 220 aa12.46□□□□□ -0.41
SHKBP1-211ENST00000595945 ZNF826PQ6ZT77 177 aa12.46□□□□□ -0.41
SHKBP1-211ENST00000595945 MUC15Q8N387 334 aa12.46□□□□□ -0.41
SHKBP1-211ENST00000595945 OR56B1Q8NGI3 324 aa12.46□□□□□ -0.41
SHKBP1-211ENST00000595945 OR10R2Q8NGX6 335 aa12.46□□□□□ -0.41
SHKBP1-211ENST00000595945 OR10Z1Q8NGY1 313 aa12.46□□□□□ -0.41
SHKBP1-211ENST00000595945 FBXW5Q969U6 566 aa12.46□□□□□ -0.41
SHKBP1-211ENST00000595945 ZNF488Q96MN9 340 aa12.46□□□□□ -0.41
SHKBP1-211ENST00000595945 CCDC32Q9BV29 185 aa12.46□□□□□ -0.41
SHKBP1-211ENST00000595945 SELENOIQ9C0D9 397 aa12.46□□□□□ -0.41
SHKBP1-211ENST00000595945 AUNIPQ9H7T9 357 aa12.46□□□□□ -0.41
SHKBP1-211ENST00000595945 HES4Q9HCC6 221 aa12.46□□□□□ -0.41
SHKBP1-211ENST00000595945 RBFOX1Q9NWB1 397 aaKnown RBP12.46□□□□□ -0.41
SHKBP1-211ENST00000595945 COL12A1Q99715 3063 aa12.46□□□□□ -0.41
SHKBP1-211ENST00000595945 SPG11Q96JI7 2443 aa12.46□□□□□ -0.42
SHKBP1-211ENST00000595945 LRBAP50851 2863 aa12.45□□□□□ -0.42
SHKBP1-211ENST00000595945 USF3Q68DE3 2245 aa12.45□□□□□ -0.42
SHKBP1-211ENST00000595945 TRAV18A0A075B6X5 111 aa12.45□□□□□ -0.42
SHKBP1-211ENST00000595945 IGHV3-64DA0A0J9YX35 117 aa12.45□□□□□ -0.42
SHKBP1-211ENST00000595945 FAM90A10PA6NDY2 464 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms