RNA–Protein interactions for RNA: ENST00000595803.5

SHKBP1-209, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 773 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-209ENST00000595803 TMEM204Q9BSN7 226 aa11.1□□□□□ -0.63
SHKBP1-209ENST00000595803 URM1Q9BTM9 101 aaKnown RBP11.1□□□□□ -0.63
SHKBP1-209ENST00000595803 PKIBQ9C010 78 aa11.1□□□□□ -0.63
SHKBP1-209ENST00000595803 KCNK15Q9H427 330 aa11.1□□□□□ -0.63
SHKBP1-209ENST00000595803 BANF2Q9H503 90 aa11.1□□□□□ -0.63
SHKBP1-209ENST00000595803 CXorf56Q9H5V9 222 aa11.1□□□□□ -0.63
SHKBP1-209ENST00000595803 RABL2AQ9UBK7 228 aaPredicted RBP11.1□□□□□ -0.63
SHKBP1-209ENST00000595803 FBLN5Q9UBX5 448 aa11.1□□□□□ -0.63
SHKBP1-209ENST00000595803 RABL2BQ9UNT1 228 aa11.1□□□□□ -0.63
SHKBP1-209ENST00000595803 MRPS7Q9Y2R9 242 aaKnown RBP11.1□□□□□ -0.63
SHKBP1-209ENST00000595803 PRRC2AP48634 2157 aaKnown RBP11.1□□□□□ -0.63
SHKBP1-209ENST00000595803 TRAPPC2LH3BP13 241 aa11.09□□□□□ -0.63
SHKBP1-209ENST00000595803 SERPINA2P20848 420 aa11.09□□□□□ -0.63
SHKBP1-209ENST00000595803 TNFSF4P23510 183 aa11.09□□□□□ -0.63
SHKBP1-209ENST00000595803 PTBP1P26599 531 aaKnown RBP eCLIP11.09□□□□□ -0.63
SHKBP1-209ENST00000595803 LOXP28300 417 aaPredicted RBP11.09□□□□□ -0.63
SHKBP1-209ENST00000595803 CD40LGP29965 261 aa11.09□□□□□ -0.63
SHKBP1-209ENST00000595803 PITPNBP48739 271 aa11.09□□□□□ -0.63
SHKBP1-209ENST00000595803 EFNB2P52799 333 aa11.09□□□□□ -0.63
SHKBP1-209ENST00000595803 PPP5CP53041 499 aa11.09□□□□□ -0.63
SHKBP1-209ENST00000595803 QRFPP83859 136 aa11.09□□□□□ -0.63
SHKBP1-209ENST00000595803 PITPNAQ00169 270 aa11.09□□□□□ -0.63
SHKBP1-209ENST00000595803 PLA2G7Q13093 441 aa11.09□□□□□ -0.63
SHKBP1-209ENST00000595803 MADCAM1Q13477 382 aa11.09□□□□□ -0.63
SHKBP1-209ENST00000595803 DAZAP2Q15038 168 aaPredicted RBP11.09□□□□□ -0.63
SHKBP1-209ENST00000595803 ZNF672Q499Z4 452 aaPredicted RBP11.09□□□□□ -0.63
SHKBP1-209ENST00000595803 PYDC2Q56P42 97 aa11.09□□□□□ -0.63
SHKBP1-209ENST00000595803 FAM76BQ5HYJ3 339 aa11.09□□□□□ -0.63
SHKBP1-209ENST00000595803 BAIAP2L2Q6UXY1 529 aa11.09□□□□□ -0.63
SHKBP1-209ENST00000595803 FBXL14Q8N1E6 418 aa11.09□□□□□ -0.63
SHKBP1-209ENST00000595803 MFSD4AQ8N468 514 aa11.09□□□□□ -0.63
SHKBP1-209ENST00000595803 ZNF611Q8N823 705 aa11.09□□□□□ -0.63
SHKBP1-209ENST00000595803 OR10AD1Q8NGE0 317 aa11.09□□□□□ -0.63
SHKBP1-209ENST00000595803 OR51T1Q8NGJ9 327 aa11.09□□□□□ -0.63
SHKBP1-209ENST00000595803 OR10K1Q8NGX5 313 aa11.09□□□□□ -0.63
SHKBP1-209ENST00000595803 SLC25A38Q96DW6 304 aa11.09□□□□□ -0.63
SHKBP1-209ENST00000595803 ELMOD3Q96FG2 381 aa11.09□□□□□ -0.63
SHKBP1-209ENST00000595803 HS3ST6Q96QI5 342 aa11.09□□□□□ -0.63
SHKBP1-209ENST00000595803 DIRC2Q96SL1 478 aa11.09□□□□□ -0.63
SHKBP1-209ENST00000595803 GAL3ST1Q99999 423 aa11.09□□□□□ -0.63
SHKBP1-209ENST00000595803 ZDHHC8Q9ULC8 765 aa11.09□□□□□ -0.63
SHKBP1-209ENST00000595803 FBN1P35555 2871 aaKnown RBP11.09□□□□□ -0.63
SHKBP1-209ENST00000595803 FN1P02751 2386 aaKnown RBP11.08□□□□□ -0.64
SHKBP1-209ENST00000595803 A0A1B0GWJ7 208 aa11.08□□□□□ -0.64
SHKBP1-209ENST00000595803 ZSCAN5BA6NJL1 495 aa11.08□□□□□ -0.64
SHKBP1-209ENST00000595803 A6NLC8 198 aa11.08□□□□□ -0.64
SHKBP1-209ENST00000595803 B9A039 149 aa11.08□□□□□ -0.64
SHKBP1-209ENST00000595803 J3QT63 122 aa11.08□□□□□ -0.64
SHKBP1-209ENST00000595803 CDC14BO60729 498 aa11.08□□□□□ -0.64
SHKBP1-209ENST00000595803 CTAG2O75638 210 aa11.08□□□□□ -0.64
SHKBP1-209ENST00000595803 CHRM2P08172 466 aa11.08□□□□□ -0.64
SHKBP1-209ENST00000595803 GTF2F2P13984 249 aa11.08□□□□□ -0.64
SHKBP1-209ENST00000595803 IGFBP2P18065 325 aa11.08□□□□□ -0.64
SHKBP1-209ENST00000595803 CD200P41217 278 aa11.08□□□□□ -0.64
SHKBP1-209ENST00000595803 NR4A2P43354 598 aa11.08□□□□□ -0.64
SHKBP1-209ENST00000595803 SRP9P49458 86 aaKnown RBP11.08□□□□□ -0.64
SHKBP1-209ENST00000595803 IL24Q13007 206 aa11.08□□□□□ -0.64
SHKBP1-209ENST00000595803 UNC119Q13432 240 aa11.08□□□□□ -0.64
SHKBP1-209ENST00000595803 PYHIN1Q6K0P9 492 aa11.08□□□□□ -0.64
SHKBP1-209ENST00000595803 Q71RC1 249 aaPredicted RBP11.08□□□□□ -0.64
SHKBP1-209ENST00000595803 TMEM200AQ86VY9 491 aa11.08□□□□□ -0.64
SHKBP1-209ENST00000595803 IZUMO1Q8IYV9 350 aa11.08□□□□□ -0.64
SHKBP1-209ENST00000595803 SCCPDHQ8NBX0 429 aa11.08□□□□□ -0.64
SHKBP1-209ENST00000595803 LILRB1Q8NHL6 650 aaPredicted RBP11.08□□□□□ -0.64
SHKBP1-209ENST00000595803 C15orf40Q8WUR7 153 aa11.08□□□□□ -0.64
SHKBP1-209ENST00000595803 GTF3AQ92664 365 aaKnown RBP11.08□□□□□ -0.64
SHKBP1-209ENST00000595803 BORCS5Q969J3 196 aa11.08□□□□□ -0.64
SHKBP1-209ENST00000595803 SLAMF9Q96A28 289 aa11.08□□□□□ -0.64
SHKBP1-209ENST00000595803 C1orf147Q96MC9 270 aaPredicted RBP11.08□□□□□ -0.64
SHKBP1-209ENST00000595803 SPOCK3Q9BQ16 436 aa11.08□□□□□ -0.64
SHKBP1-209ENST00000595803 SOSTQ9BQB4 213 aa11.08□□□□□ -0.64
SHKBP1-209ENST00000595803 TMEM59Q9BXS4 323 aa11.08□□□□□ -0.64
SHKBP1-209ENST00000595803 SELENOIQ9C0D9 397 aa11.08□□□□□ -0.64
SHKBP1-209ENST00000595803 DYNLRB1Q9NP97 96 aa11.08□□□□□ -0.64
SHKBP1-209ENST00000595803 IL36GQ9NZH8 169 aa11.08□□□□□ -0.64
SHKBP1-209ENST00000595803 POLDIP2Q9Y2S7 368 aa11.08□□□□□ -0.64
SHKBP1-209ENST00000595803 TRAV18A0A075B6X5 111 aa11.07□□□□□ -0.64
SHKBP1-209ENST00000595803 A0A0A6YYH2 397 aa11.07□□□□□ -0.64
SHKBP1-209ENST00000595803 IGKV1-12A0A0C4DH73 117 aa11.07□□□□□ -0.64
SHKBP1-209ENST00000595803 IGHV3-64DA0A0J9YX35 117 aa11.07□□□□□ -0.64
SHKBP1-209ENST00000595803 A0A1W2PP11 408 aa11.07□□□□□ -0.64
SHKBP1-209ENST00000595803 A6NJ64 397 aa11.07□□□□□ -0.64
SHKBP1-209ENST00000595803 J3QRK9 145 aa11.07□□□□□ -0.64
SHKBP1-209ENST00000595803 M0R233 179 aa11.07□□□□□ -0.64
SHKBP1-209ENST00000595803 CDIPTO14735 213 aa11.07□□□□□ -0.64
SHKBP1-209ENST00000595803 TPD52L2O43399 206 aaKnown RBP11.07□□□□□ -0.64
SHKBP1-209ENST00000595803 XRCC3O43542 346 aa11.07□□□□□ -0.64
SHKBP1-209ENST00000595803 SYNGR1O43759 233 aa11.07□□□□□ -0.64
SHKBP1-209ENST00000595803 SCGNO76038 276 aa11.07□□□□□ -0.64
SHKBP1-209ENST00000595803 IGKV1D-12P01611 117 aa11.07□□□□□ -0.64
SHKBP1-209ENST00000595803 IGHV1-46P01743 117 aa11.07□□□□□ -0.64
SHKBP1-209ENST00000595803 MGMTP16455 207 aa11.07□□□□□ -0.64
SHKBP1-209ENST00000595803 CDK2P24941 298 aa11.07□□□□□ -0.64
SHKBP1-209ENST00000595803 VEGFCP49767 419 aa11.07□□□□□ -0.64
SHKBP1-209ENST00000595803 TNFAIP6P98066 277 aaPredicted RBP11.07□□□□□ -0.64
SHKBP1-209ENST00000595803 ZNF154Q13106 437 aa11.07□□□□□ -0.64
SHKBP1-209ENST00000595803 MAB21L1Q13394 359 aa11.07□□□□□ -0.64
SHKBP1-209ENST00000595803 EFNB3Q15768 340 aa11.07□□□□□ -0.64
SHKBP1-209ENST00000595803 TMEM69Q5SWH9 247 aa11.07□□□□□ -0.64
SHKBP1-209ENST00000595803 PRAMEF6Q5VXH4 476 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms