RNA–Protein interactions for RNA: ENST00000594862.1

SHKBP1-204, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 623 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-204ENST00000594862 ALG8Q9BVK2 526 aa14.62□□□□□ -0.07
SHKBP1-204ENST00000594862 HES4Q9HCC6 221 aa14.62□□□□□ -0.07
SHKBP1-204ENST00000594862 ZKSCAN7Q9P0L1 754 aaPredicted RBP14.62□□□□□ -0.07
SHKBP1-204ENST00000594862 HHLA2Q9UM44 414 aa14.62□□□□□ -0.07
SHKBP1-204ENST00000594862 POMT1Q9Y6A1 747 aa14.62□□□□□ -0.07
SHKBP1-204ENST00000594862 KNG1P01042 644 aa14.61□□□□□ -0.07
SHKBP1-204ENST00000594862 SELLP14151 372 aa14.61□□□□□ -0.07
SHKBP1-204ENST00000594862 CAPZA1P52907 286 aa14.61□□□□□ -0.07
SHKBP1-204ENST00000594862 OR12D2P58182 307 aa14.61□□□□□ -0.07
SHKBP1-204ENST00000594862 DEFB112Q30KQ8 113 aa14.61□□□□□ -0.07
SHKBP1-204ENST00000594862 DMRTC1Q5HYR2 192 aa14.61□□□□□ -0.07
SHKBP1-204ENST00000594862 FIP1L1Q6UN15 594 aaKnown RBP14.61□□□□□ -0.07
SHKBP1-204ENST00000594862 TRMT10AQ8TBZ6 339 aaKnown RBP14.61□□□□□ -0.07
SHKBP1-204ENST00000594862 SPSB1Q96BD6 273 aa14.61□□□□□ -0.07
SHKBP1-204ENST00000594862 PELI1Q96FA3 418 aa14.61□□□□□ -0.07
SHKBP1-204ENST00000594862 C1orf147Q96MC9 270 aaPredicted RBP14.61□□□□□ -0.07
SHKBP1-204ENST00000594862 FAM234AQ9H0X4 552 aa14.61□□□□□ -0.07
SHKBP1-204ENST00000594862 METTL8Q9H825 291 aaKnown RBP14.61□□□□□ -0.07
SHKBP1-204ENST00000594862 MRPS18AQ9NVS2 196 aaKnown RBP14.61□□□□□ -0.07
SHKBP1-204ENST00000594862 FRRS1LQ9P0K9 344 aa14.61□□□□□ -0.07
SHKBP1-204ENST00000594862 MAB21L2Q9Y586 359 aa14.61□□□□□ -0.07
SHKBP1-204ENST00000594862 A6NIN4 97 aa14.6□□□□□ -0.07
SHKBP1-204ENST00000594862 RFPL4AA6NLU0 287 aa14.6□□□□□ -0.07
SHKBP1-204ENST00000594862 RFPL4AL1F8VTS6 287 aa14.6□□□□□ -0.07
SHKBP1-204ENST00000594862 J3QLW9 94 aa14.6□□□□□ -0.07
SHKBP1-204ENST00000594862 CCDC159P0C7I6 412 aa14.6□□□□□ -0.07
SHKBP1-204ENST00000594862 OCM2P0CE71 109 aa14.6□□□□□ -0.07
SHKBP1-204ENST00000594862 OCMP0CE72 109 aaPredicted RBP14.6□□□□□ -0.07
SHKBP1-204ENST00000594862 ZNF19P17023 458 aa14.6□□□□□ -0.07
SHKBP1-204ENST00000594862 PRDX2P32119 198 aa14.6□□□□□ -0.07
SHKBP1-204ENST00000594862 RBP2P50120 134 aa14.6□□□□□ -0.07
SHKBP1-204ENST00000594862 ATP1B3P54709 279 aa14.6□□□□□ -0.07
SHKBP1-204ENST00000594862 RPL15P61313 204 aaKnown RBP14.6□□□□□ -0.07
SHKBP1-204ENST00000594862 ERVK11-1P61568 191 aa14.6□□□□□ -0.07
SHKBP1-204ENST00000594862 UBE2V2Q15819 145 aa14.6□□□□□ -0.07
SHKBP1-204ENST00000594862 RUSC1-AS1Q66K80 236 aa14.6□□□□□ -0.07
SHKBP1-204ENST00000594862 Q6YL49 198 aa14.6□□□□□ -0.07
SHKBP1-204ENST00000594862 CALHM1Q8IU99 346 aa14.6□□□□□ -0.07
SHKBP1-204ENST00000594862 FGFRL1Q8N441 504 aa14.6□□□□□ -0.07
SHKBP1-204ENST00000594862 ZNF676Q8N7Q3 588 aa14.6□□□□□ -0.07
SHKBP1-204ENST00000594862 ZNRF1Q8ND25 227 aa14.6□□□□□ -0.07
SHKBP1-204ENST00000594862 SETD9Q8NE22 299 aa14.6□□□□□ -0.07
SHKBP1-204ENST00000594862 OR5D13Q8NGL4 314 aa14.6□□□□□ -0.07
SHKBP1-204ENST00000594862 SSMEM1Q8WWF3 244 aa14.6□□□□□ -0.07
SHKBP1-204ENST00000594862 CEP19Q96LK0 163 aa14.6□□□□□ -0.07
SHKBP1-204ENST00000594862 UNKLQ9H9P5 680 aaKnown RBP14.6□□□□□ -0.07
SHKBP1-204ENST00000594862 hCG_1809904A0A1W2PP81 198 aa14.59□□□□□ -0.07
SHKBP1-204ENST00000594862 A0A1W2PPE2 198 aa14.59□□□□□ -0.07
SHKBP1-204ENST00000594862 A0A1W2PR64 198 aa14.59□□□□□ -0.07
SHKBP1-204ENST00000594862 A0A1W2PRV1 198 aa14.59□□□□□ -0.07
SHKBP1-204ENST00000594862 HOXA3O43365 443 aaPredicted RBP14.59□□□□□ -0.07
SHKBP1-204ENST00000594862 ALKBH1Q13686 389 aaKnown RBP14.59□□□□□ -0.07
SHKBP1-204ENST00000594862 TTC23Q5W5X9 447 aa14.59□□□□□ -0.07
SHKBP1-204ENST00000594862 LHFPL2Q6ZUX7 228 aa14.59□□□□□ -0.07
SHKBP1-204ENST00000594862 MKXQ8IYA7 352 aa14.59□□□□□ -0.07
SHKBP1-204ENST00000594862 OR13C3Q8NGS6 347 aa14.59□□□□□ -0.07
SHKBP1-204ENST00000594862 RNF166Q96A37 237 aaPredicted RBP14.59□□□□□ -0.07
SHKBP1-204ENST00000594862 ZNF488Q96MN9 340 aa14.59□□□□□ -0.07
SHKBP1-204ENST00000594862 JAM3Q9BX67 310 aa14.59□□□□□ -0.07
SHKBP1-204ENST00000594862 COMMD4Q9H0A8 199 aa14.59□□□□□ -0.07
SHKBP1-204ENST00000594862 ERVK13-1Q9NX77 482 aa14.59□□□□□ -0.07
SHKBP1-204ENST00000594862 FAM96BQ9Y3D0 163 aa14.59□□□□□ -0.07
SHKBP1-204ENST00000594862 MDFIC2A0A1B0GVS7 189 aa14.58□□□□□ -0.08
SHKBP1-204ENST00000594862 TMEM212A6NML5 194 aa14.58□□□□□ -0.08
SHKBP1-204ENST00000594862 OR4C45A6NMZ5 311 aa14.58□□□□□ -0.08
SHKBP1-204ENST00000594862 H3BSH0 61 aa14.58□□□□□ -0.08
SHKBP1-204ENST00000594862 FBP1P09467 338 aa14.58□□□□□ -0.08
SHKBP1-204ENST00000594862 CFPP27918 469 aa14.58□□□□□ -0.08
SHKBP1-204ENST00000594862 GBX2P52951 348 aaPredicted RBP14.58□□□□□ -0.08
SHKBP1-204ENST00000594862 NANOS3P60323 173 aaKnown RBP14.58□□□□□ -0.08
SHKBP1-204ENST00000594862 IL18R1Q13478 541 aa14.58□□□□□ -0.08
SHKBP1-204ENST00000594862 AWAT1Q58HT5 328 aa14.58□□□□□ -0.08
SHKBP1-204ENST00000594862 C16orf87Q6PH81 154 aa14.58□□□□□ -0.08
SHKBP1-204ENST00000594862 LHFPL3Q86UP9 236 aa14.58□□□□□ -0.08
SHKBP1-204ENST00000594862 ANGPTL5Q86XS5 388 aa14.58□□□□□ -0.08
SHKBP1-204ENST00000594862 LDLRAD3Q86YD5 345 aa14.58□□□□□ -0.08
SHKBP1-204ENST00000594862 RDH10Q8IZV5 341 aa14.58□□□□□ -0.08
SHKBP1-204ENST00000594862 FAM185AQ8N0U4 392 aa14.58□□□□□ -0.08
SHKBP1-204ENST00000594862 CD177Q8N6Q3 437 aa14.58□□□□□ -0.08
SHKBP1-204ENST00000594862 ADAT3Q96EY9 351 aaPredicted RBP14.58□□□□□ -0.08
SHKBP1-204ENST00000594862 CPNE2Q96FN4 548 aaPredicted RBP14.58□□□□□ -0.08
SHKBP1-204ENST00000594862 DUX5Q96PT3 197 aa14.58□□□□□ -0.08
SHKBP1-204ENST00000594862 SEBOXQ9HB31 216 aaPredicted RBP14.58□□□□□ -0.08
SHKBP1-204ENST00000594862 SIRT7Q9NRC8 400 aa14.58□□□□□ -0.08
SHKBP1-204ENST00000594862 MT-ND2P03891 347 aa14.57□□□□□ -0.08
SHKBP1-204ENST00000594862 CRYBA1P05813 215 aa14.57□□□□□ -0.08
SHKBP1-204ENST00000594862 CHRM2P08172 466 aa14.57□□□□□ -0.08
SHKBP1-204ENST00000594862 MELTFP08582 738 aa14.57□□□□□ -0.08
SHKBP1-204ENST00000594862 ATF1P18846 271 aa14.57□□□□□ -0.08
SHKBP1-204ENST00000594862 AZGP1P25311 298 aaKnown RBP14.57□□□□□ -0.08
SHKBP1-204ENST00000594862 RPL31P62899 125 aaKnown RBP14.57□□□□□ -0.08
SHKBP1-204ENST00000594862 ACSM1Q08AH1 577 aa14.57□□□□□ -0.08
SHKBP1-204ENST00000594862 MED21Q13503 144 aa14.57□□□□□ -0.08
SHKBP1-204ENST00000594862 RCN1Q15293 331 aa14.57□□□□□ -0.08
SHKBP1-204ENST00000594862 SLC25A26Q70HW3 274 aa14.57□□□□□ -0.08
SHKBP1-204ENST00000594862 Q8N7P7 452 aa14.57□□□□□ -0.08
SHKBP1-204ENST00000594862 OR52I1Q8NGK6 324 aa14.57□□□□□ -0.08
SHKBP1-204ENST00000594862 APH1BQ8WW43 257 aa14.57□□□□□ -0.08
SHKBP1-204ENST00000594862 FGGYQ96C11 551 aa14.57□□□□□ -0.08
SHKBP1-204ENST00000594862 OPALINQ96PE5 141 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms