RNA–Protein interactions for RNA: ENST00000594504.5

UPF1-203, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 3

Gene UPF1, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-203ENST00000594504 DUX4L6P0CJ89 424 aa10.31□□□□□ -0.76
UPF1-203ENST00000594504 DUX4L7P0CJ90 424 aa10.31□□□□□ -0.76
UPF1-203ENST00000594504 NPY4RP50391 375 aa10.31□□□□□ -0.76
UPF1-203ENST00000594504 RAG2P55895 527 aa10.31□□□□□ -0.76
UPF1-203ENST00000594504 KCNJ8Q15842 424 aa10.31□□□□□ -0.76
UPF1-203ENST00000594504 PDLIM3Q53GG5 364 aaPredicted RBP10.31□□□□□ -0.76
UPF1-203ENST00000594504 OR2G6Q5TZ20 316 aa10.31□□□□□ -0.76
UPF1-203ENST00000594504 DUX4L9Q6RFH8 374 aaPredicted RBP10.31□□□□□ -0.76
UPF1-203ENST00000594504 WDR82Q6UXN9 313 aa10.31□□□□□ -0.76
UPF1-203ENST00000594504 STX19Q8N4C7 294 aa10.31□□□□□ -0.76
UPF1-203ENST00000594504 GCSAMQ8N6F7 178 aa10.31□□□□□ -0.76
UPF1-203ENST00000594504 OR5AK2Q8NH90 309 aa10.31□□□□□ -0.76
UPF1-203ENST00000594504 LRRC29Q8WV35 223 aa10.31□□□□□ -0.76
UPF1-203ENST00000594504 PP6455Q8WZ26 134 aa10.31□□□□□ -0.76
UPF1-203ENST00000594504 WDFY2Q96P53 400 aa10.31□□□□□ -0.76
UPF1-203ENST00000594504 CHST5Q9GZS9 411 aa10.31□□□□□ -0.76
UPF1-203ENST00000594504 COMMD4Q9H0A8 199 aa10.31□□□□□ -0.76
UPF1-203ENST00000594504 SIRPDQ9H106 197 aa10.31□□□□□ -0.76
UPF1-203ENST00000594504 GPR173Q9NS66 373 aa10.31□□□□□ -0.76
UPF1-203ENST00000594504 SCN3BQ9NY72 215 aa10.31□□□□□ -0.76
UPF1-203ENST00000594504 DUX4Q9UBX2 424 aa10.31□□□□□ -0.76
UPF1-203ENST00000594504 CLEC2DQ9UHP7 191 aa10.31□□□□□ -0.76
UPF1-203ENST00000594504 RAB26Q9ULW5 256 aa10.31□□□□□ -0.76
UPF1-203ENST00000594504 MMP24Q9Y5R2 645 aa10.31□□□□□ -0.76
UPF1-203ENST00000594504 TRBV2A0A0J9YWF9 115 aa10.3□□□□□ -0.76
UPF1-203ENST00000594504 OOEPA6NGQ2 149 aa10.3□□□□□ -0.76
UPF1-203ENST00000594504 A6NIN4 97 aa10.3□□□□□ -0.76
UPF1-203ENST00000594504 DVL1O14640 695 aa10.3□□□□□ -0.76
UPF1-203ENST00000594504 GATBO75879 557 aaKnown RBP10.3□□□□□ -0.76
UPF1-203ENST00000594504 ZFPL1O95159 310 aa10.3□□□□□ -0.76
UPF1-203ENST00000594504 SERPINA3P01011 423 aa10.3□□□□□ -0.76
UPF1-203ENST00000594504 PRB3Q04118 309 aaPredicted RBP10.3□□□□□ -0.76
UPF1-203ENST00000594504 MIDNQ504T8 468 aa10.3□□□□□ -0.76
UPF1-203ENST00000594504 CD276Q5ZPR3 534 aa10.3□□□□□ -0.76
UPF1-203ENST00000594504 OLFML2AQ68BL7 652 aa10.3□□□□□ -0.76
UPF1-203ENST00000594504 RPL22L1Q6P5R6 122 aaKnown RBP10.3□□□□□ -0.76
UPF1-203ENST00000594504 BTN2A1Q7KYR7 527 aa10.3□□□□□ -0.76
UPF1-203ENST00000594504 FAM90A1Q86YD7 464 aa10.3□□□□□ -0.76
UPF1-203ENST00000594504 SCCPDHQ8NBX0 429 aa10.3□□□□□ -0.76
UPF1-203ENST00000594504 OR10Z1Q8NGY1 313 aa10.3□□□□□ -0.76
UPF1-203ENST00000594504 WFDC12Q8WWY7 111 aa10.3□□□□□ -0.76
UPF1-203ENST00000594504 RPL3LQ92901 407 aaKnown RBP10.3□□□□□ -0.76
UPF1-203ENST00000594504 MYDGFQ969H8 173 aa10.3□□□□□ -0.76
UPF1-203ENST00000594504 SEH1LQ96EE3 360 aa10.3□□□□□ -0.76
UPF1-203ENST00000594504 OR51I2Q9H344 312 aa10.3□□□□□ -0.76
UPF1-203ENST00000594504 BEX1Q9HBH7 125 aa10.3□□□□□ -0.76
UPF1-203ENST00000594504 NOX4Q9NPH5 578 aa10.3□□□□□ -0.76
UPF1-203ENST00000594504 BABAM2Q9NXR7 383 aa10.3□□□□□ -0.76
UPF1-203ENST00000594504 SLC7A11Q9UPY5 501 aa10.3□□□□□ -0.76
UPF1-203ENST00000594504 TRAV38-1A0A0B4J264 116 aa10.29□□□□□ -0.76
UPF1-203ENST00000594504 IGHV1-69DA0A0B4J2H0 117 aa10.29□□□□□ -0.76
UPF1-203ENST00000594504 A0A0U1RQK1 487 aa10.29□□□□□ -0.76
UPF1-203ENST00000594504 PQLC2LA1A4F0 135 aa10.29□□□□□ -0.76
UPF1-203ENST00000594504 MYL12BO14950 172 aa10.29□□□□□ -0.76
UPF1-203ENST00000594504 NDUFA2O43678 99 aa10.29□□□□□ -0.76
UPF1-203ENST00000594504 RRP9O43818 475 aaKnown RBP10.29□□□□□ -0.76
UPF1-203ENST00000594504 IGHV1-69P01742 117 aa10.29□□□□□ -0.76
UPF1-203ENST00000594504 IGHV4-59P01825 116 aa10.29□□□□□ -0.76
UPF1-203ENST00000594504 CDK1P06493 297 aa10.29□□□□□ -0.76
UPF1-203ENST00000594504 LIPFP07098 398 aa10.29□□□□□ -0.76
UPF1-203ENST00000594504 ZNF20P17024 532 aa10.29□□□□□ -0.76
UPF1-203ENST00000594504 C21orf33P30042 268 aaPredicted RBP10.29□□□□□ -0.76
UPF1-203ENST00000594504 GTF2A1P52655 376 aaPredicted RBP10.29□□□□□ -0.76
UPF1-203ENST00000594504 DLX1P56177 255 aa10.29□□□□□ -0.76
UPF1-203ENST00000594504 TAS2R43P59537 309 aa10.29□□□□□ -0.76
UPF1-203ENST00000594504 BPIFB3P59826 476 aa10.29□□□□□ -0.76
UPF1-203ENST00000594504 CDK5R1Q15078 307 aa10.29□□□□□ -0.76
UPF1-203ENST00000594504 CNN3Q15417 329 aaKnown RBP10.29□□□□□ -0.76
UPF1-203ENST00000594504 UBE2V2Q15819 145 aa10.29□□□□□ -0.76
UPF1-203ENST00000594504 DMRTC1Q5HYR2 192 aa10.29□□□□□ -0.76
UPF1-203ENST00000594504 METTL11BQ5VVY1 283 aa10.29□□□□□ -0.76
UPF1-203ENST00000594504 TEX36Q5VZQ5 186 aa10.29□□□□□ -0.76
UPF1-203ENST00000594504 XAF1Q6GPH4 301 aa10.29□□□□□ -0.76
UPF1-203ENST00000594504 C17orf107Q6ZR85 190 aa10.29□□□□□ -0.76
UPF1-203ENST00000594504 UTS2BQ765I0 119 aa10.29□□□□□ -0.76
UPF1-203ENST00000594504 ZNF573Q86YE8 665 aa10.29□□□□□ -0.76
UPF1-203ENST00000594504 ZNF485Q8NCK3 441 aa10.29□□□□□ -0.76
UPF1-203ENST00000594504 OR51A4Q8NGJ6 313 aa10.29□□□□□ -0.76
UPF1-203ENST00000594504 OR13C3Q8NGS6 347 aa10.29□□□□□ -0.76
UPF1-203ENST00000594504 OR10AC1Q8NH08 325 aa10.29□□□□□ -0.76
UPF1-203ENST00000594504 OR4F5Q8NH21 305 aa10.29□□□□□ -0.76
UPF1-203ENST00000594504 RPS4Y2Q8TD47 263 aa10.29□□□□□ -0.76
UPF1-203ENST00000594504 GATAD2BQ8WXI9 593 aa10.29□□□□□ -0.76
UPF1-203ENST00000594504 ST8SIA4Q92187 359 aa10.29□□□□□ -0.76
UPF1-203ENST00000594504 FGGYQ96C11 551 aa10.29□□□□□ -0.76
UPF1-203ENST00000594504 ADAT3Q96EY9 351 aaPredicted RBP10.29□□□□□ -0.76
UPF1-203ENST00000594504 CCL13Q99616 98 aa10.29□□□□□ -0.76
UPF1-203ENST00000594504 ZNF184Q99676 751 aaPredicted RBP10.29□□□□□ -0.76
UPF1-203ENST00000594504 PDCD1LG2Q9BQ51 273 aa10.29□□□□□ -0.76
UPF1-203ENST00000594504 DNAJB11Q9UBS4 358 aa10.29□□□□□ -0.76
UPF1-203ENST00000594504 TPRKBQ9Y3C4 175 aa10.29□□□□□ -0.76
UPF1-203ENST00000594504 CLPSL1A2RUU4 121 aa10.28□□□□□ -0.76
UPF1-203ENST00000594504 PTGES3LE9PB15 166 aa10.28□□□□□ -0.76
UPF1-203ENST00000594504 J3QT63 122 aa10.28□□□□□ -0.76
UPF1-203ENST00000594504 OGG1O15527 345 aa10.28□□□□□ -0.76
UPF1-203ENST00000594504 MUC1P15941 1255 aaPredicted RBP10.28□□□□□ -0.76
UPF1-203ENST00000594504 HAAOP46952 286 aa10.28□□□□□ -0.76
UPF1-203ENST00000594504 FUT6P51993 359 aa10.28□□□□□ -0.76
UPF1-203ENST00000594504 WNT4P56705 351 aa10.28□□□□□ -0.76
UPF1-203ENST00000594504 SLC35A2P78381 396 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms