RNA–Protein interactions for RNA: ENST00000594067.5

LIG1-206, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 2,697 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-206ENST00000594067 SULF2Q8IWU5 870 aa14.39□□□□□ -0.11
LIG1-206ENST00000594067 ZNF561Q8N587 486 aa14.39□□□□□ -0.11
LIG1-206ENST00000594067 OR2AE1Q8NHA4 323 aa14.39□□□□□ -0.11
LIG1-206ENST00000594067 ZNF251Q9BRH9 671 aa14.39□□□□□ -0.11
LIG1-206ENST00000594067 SEBOXQ9HB31 216 aaPredicted RBP14.39□□□□□ -0.11
LIG1-206ENST00000594067 STARD10Q9Y365 291 aa14.39□□□□□ -0.11
LIG1-206ENST00000594067 MYO7BQ6PIF6 2116 aa14.39□□□□□ -0.11
LIG1-206ENST00000594067 K7EPK0 472 aa14.39□□□□□ -0.11
LIG1-206ENST00000594067 SPRY1O43609 319 aaPredicted RBP14.39□□□□□ -0.11
LIG1-206ENST00000594067 JTBO76095 146 aa14.39□□□□□ -0.11
LIG1-206ENST00000594067 MT-ND4LP03901 98 aa14.39□□□□□ -0.11
LIG1-206ENST00000594067 S100A9P06702 114 aaKnown RBP14.39□□□□□ -0.11
LIG1-206ENST00000594067 PNLIPP16233 465 aa14.39□□□□□ -0.11
LIG1-206ENST00000594067 FCGR2CP31995 323 aa14.39□□□□□ -0.11
LIG1-206ENST00000594067 RRADP55042 308 aa14.39□□□□□ -0.11
LIG1-206ENST00000594067 TMEM33P57088 247 aa14.39□□□□□ -0.11
LIG1-206ENST00000594067 EIF3IQ13347 325 aaKnown RBP14.39□□□□□ -0.11
LIG1-206ENST00000594067 SPEM1Q8N4L4 309 aa14.39□□□□□ -0.11
LIG1-206ENST00000594067 FAM71E2Q8N5Q1 922 aa14.39□□□□□ -0.11
LIG1-206ENST00000594067 SGK3Q96BR1 496 aa14.39□□□□□ -0.11
LIG1-206ENST00000594067 FBXO17Q96EF6 278 aa14.39□□□□□ -0.11
LIG1-206ENST00000594067 SMIM3Q9BZL3 60 aa14.39□□□□□ -0.11
LIG1-206ENST00000594067 PARP12Q9H0J9 701 aaKnown RBP14.39□□□□□ -0.11
LIG1-206ENST00000594067 AMDHD2Q9Y303 409 aa14.39□□□□□ -0.11
LIG1-206ENST00000594067 FKBP2P26885 142 aaKnown RBP14.38□□□□□ -0.11
LIG1-206ENST00000594067 EPHA8P29322 1005 aaPredicted RBP14.38□□□□□ -0.11
LIG1-206ENST00000594067 MTCP1P56278 107 aa14.38□□□□□ -0.11
LIG1-206ENST00000594067 FAM3AP98173 230 aa14.38□□□□□ -0.11
LIG1-206ENST00000594067 TGIF1Q15583 401 aa14.38□□□□□ -0.11
LIG1-206ENST00000594067 SGPP2Q8IWX5 399 aa14.38□□□□□ -0.11
LIG1-206ENST00000594067 TMEM123Q8N131 208 aa14.38□□□□□ -0.11
LIG1-206ENST00000594067 OR9K2Q8NGE7 335 aa14.38□□□□□ -0.11
LIG1-206ENST00000594067 MRPL24Q96A35 216 aaKnown RBP14.38□□□□□ -0.11
LIG1-206ENST00000594067 IP6K3Q96PC2 410 aa14.38□□□□□ -0.11
LIG1-206ENST00000594067 FAAP24Q9BTP7 215 aa14.38□□□□□ -0.11
LIG1-206ENST00000594067 SCRT1Q9BWW7 348 aa14.38□□□□□ -0.11
LIG1-206ENST00000594067 ULBP2Q9BZM5 246 aa14.38□□□□□ -0.11
LIG1-206ENST00000594067 LSM5Q9Y4Y9 91 aaKnown RBP14.38□□□□□ -0.11
LIG1-206ENST00000594067 CNTRLQ7Z7A1 2325 aa14.38□□□□□ -0.11
LIG1-206ENST00000594067 ACKR3P25106 362 aa14.38□□□□□ -0.11
LIG1-206ENST00000594067 ZNF84P51523 738 aa14.38□□□□□ -0.11
LIG1-206ENST00000594067 TSC22D1Q15714 1073 aa14.38□□□□□ -0.11
LIG1-206ENST00000594067 TAF9Q16594 264 aa14.38□□□□□ -0.11
LIG1-206ENST00000594067 RPUSD3Q6P087 351 aaKnown RBP14.38□□□□□ -0.11
LIG1-206ENST00000594067 FNDC9Q8TBE3 224 aa14.38□□□□□ -0.11
LIG1-206ENST00000594067 ISOC2Q96AB3 205 aa14.38□□□□□ -0.11
LIG1-206ENST00000594067 Q96M66 194 aa14.38□□□□□ -0.11
LIG1-206ENST00000594067 LIME1Q9H400 295 aa14.38□□□□□ -0.11
LIG1-206ENST00000594067 NIT2Q9NQR4 276 aa14.38□□□□□ -0.11
LIG1-206ENST00000594067 FAM230AA0A1W2PPH8 454 aa14.38□□□□□ -0.11
LIG1-206ENST00000594067 C7orf77A4D0Y5 90 aa14.38□□□□□ -0.11
LIG1-206ENST00000594067 DEDDO75618 318 aa14.38□□□□□ -0.11
LIG1-206ENST00000594067 ONECUT2O95948 504 aa14.38□□□□□ -0.11
LIG1-206ENST00000594067 SCGB1D2O95969 90 aa14.38□□□□□ -0.11
LIG1-206ENST00000594067 OTX1P32242 354 aaPredicted RBP14.38□□□□□ -0.11
LIG1-206ENST00000594067 OPRM1P35372 400 aa14.38□□□□□ -0.11
LIG1-206ENST00000594067 HIST1H3AP68431 136 aa14.38□□□□□ -0.11
LIG1-206ENST00000594067 HMGN3Q15651 99 aa14.38□□□□□ -0.11
LIG1-206ENST00000594067 AWAT1Q58HT5 328 aa14.38□□□□□ -0.11
LIG1-206ENST00000594067 HIST2H3PS2Q5TEC6 136 aa14.38□□□□□ -0.11
LIG1-206ENST00000594067 GGNBP1Q5YKI7 109 aa14.38□□□□□ -0.11
LIG1-206ENST00000594067 FOXL2NBQ6ZUU3 175 aa14.38□□□□□ -0.11
LIG1-206ENST00000594067 HIST2H3AQ71DI3 136 aa14.38□□□□□ -0.11
LIG1-206ENST00000594067 C20orf196Q8IYI0 205 aa14.38□□□□□ -0.11
LIG1-206ENST00000594067 NAXEQ8NCW5 288 aa14.38□□□□□ -0.11
LIG1-206ENST00000594067 TUBA4BQ9H853 241 aa14.38□□□□□ -0.11
LIG1-206ENST00000594067 SNRNP70P08621 437 aaKnown RBP14.37□□□□□ -0.11
LIG1-206ENST00000594067 SNCAP37840 140 aa14.37□□□□□ -0.11
LIG1-206ENST00000594067 FABP9Q0Z7S8 132 aa14.37□□□□□ -0.11
LIG1-206ENST00000594067 ARL6IP1Q15041 203 aa14.37□□□□□ -0.11
LIG1-206ENST00000594067 CLEC9AQ6UXN8 241 aa14.37□□□□□ -0.11
LIG1-206ENST00000594067 TCEAL3Q969E4 200 aa14.37□□□□□ -0.11
LIG1-206ENST00000594067 TOMM40LQ969M1 308 aa14.37□□□□□ -0.11
LIG1-206ENST00000594067 SPTSSAQ969W0 71 aa14.37□□□□□ -0.11
LIG1-206ENST00000594067 PRRX2Q99811 253 aa14.37□□□□□ -0.11
LIG1-206ENST00000594067 UBE2ZQ9H832 354 aaPredicted RBP14.37□□□□□ -0.11
LIG1-206ENST00000594067 ANXA10Q9UJ72 324 aa14.37□□□□□ -0.11
LIG1-206ENST00000594067 PADI1Q9ULC6 663 aa14.37□□□□□ -0.11
LIG1-206ENST00000594067 A0A087WZY1 265 aa14.37□□□□□ -0.11
LIG1-206ENST00000594067 MASP2O00187 686 aa14.37□□□□□ -0.11
LIG1-206ENST00000594067 TNFSF11O14788 317 aa14.37□□□□□ -0.11
LIG1-206ENST00000594067 CTSDP07339 412 aaPredicted RBP14.37□□□□□ -0.11
LIG1-206ENST00000594067 OR5H8P0DN80 308 aa14.37□□□□□ -0.11
LIG1-206ENST00000594067 SP6Q3SY56 376 aa14.37□□□□□ -0.11
LIG1-206ENST00000594067 ZIC4Q8N9L1 334 aa14.37□□□□□ -0.11
LIG1-206ENST00000594067 DYRK2Q92630 601 aa14.37□□□□□ -0.11
LIG1-206ENST00000594067 PROK2Q9HC23 129 aa14.37□□□□□ -0.11
LIG1-206ENST00000594067 METTL1Q9UBP6 276 aaKnown RBP14.37□□□□□ -0.11
LIG1-206ENST00000594067 AK3Q9UIJ7 227 aa14.37□□□□□ -0.11
LIG1-206ENST00000594067 TUBD1Q9UJT1 453 aa14.37□□□□□ -0.11
LIG1-206ENST00000594067 DKKL1Q9UK85 242 aa14.37□□□□□ -0.11
LIG1-206ENST00000594067 A0A0J9YW62 118 aa14.36□□□□□ -0.11
LIG1-206ENST00000594067 CRYM-AS1A6NIL9 109 aa14.36□□□□□ -0.11
LIG1-206ENST00000594067 RRP8O43159 456 aaKnown RBP14.36□□□□□ -0.11
LIG1-206ENST00000594067 ZIC3O60481 467 aa14.36□□□□□ -0.11
LIG1-206ENST00000594067 EIF1BO60739 113 aaKnown RBP14.36□□□□□ -0.11
LIG1-206ENST00000594067 CA11O75493 328 aa14.36□□□□□ -0.11
LIG1-206ENST00000594067 STARD6P59095 220 aa14.36□□□□□ -0.11
LIG1-206ENST00000594067 PPA1Q15181 289 aa14.36□□□□□ -0.11
LIG1-206ENST00000594067 FAM209BQ5JX69 171 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms