RNA–Protein interactions for RNA: ENST00000593254.1

H3F3B-213, Transcript of H3 histone family member 3B, humanhuman

TSL 5

Gene H3F3B, Length 894 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-213ENST00000593254 RORBQ92753 470 aa10.8□□□□□ -0.68
H3F3B-213ENST00000593254 RFKQ969G6 155 aa10.8□□□□□ -0.68
H3F3B-213ENST00000593254 ZNF488Q96MN9 340 aa10.8□□□□□ -0.68
H3F3B-213ENST00000593254 NRIP2Q9BQI9 281 aa10.8□□□□□ -0.68
H3F3B-213ENST00000593254 METTL8Q9H825 291 aaKnown RBP10.8□□□□□ -0.68
H3F3B-213ENST00000593254 HES4Q9HCC6 221 aa10.8□□□□□ -0.68
H3F3B-213ENST00000593254 ZNRD1Q9P1U0 126 aa10.8□□□□□ -0.68
H3F3B-213ENST00000593254 POLDIP2Q9Y2S7 368 aa10.8□□□□□ -0.68
H3F3B-213ENST00000593254 CAB39Q9Y376 341 aaPredicted RBP10.8□□□□□ -0.68
H3F3B-213ENST00000593254 FAM96BQ9Y3D0 163 aa10.8□□□□□ -0.68
H3F3B-213ENST00000593254 COL7A1Q02388 2944 aa10.79□□□□□ -0.68
H3F3B-213ENST00000593254 NOTCH3Q9UM47 2321 aa10.79□□□□□ -0.68
H3F3B-213ENST00000593254 CLPSL1A2RUU4 121 aa10.79□□□□□ -0.68
H3F3B-213ENST00000593254 ANKRD61A6NGH8 418 aa10.79□□□□□ -0.68
H3F3B-213ENST00000593254 H3BNX3 289 aa10.79□□□□□ -0.68
H3F3B-213ENST00000593254 NPFFO15130 113 aa10.79□□□□□ -0.68
H3F3B-213ENST00000593254 GPR137BO60478 399 aa10.79□□□□□ -0.68
H3F3B-213ENST00000593254 EEF1B2P24534 225 aaKnown RBP10.79□□□□□ -0.68
H3F3B-213ENST00000593254 ATP6V1E1P36543 226 aa10.79□□□□□ -0.68
H3F3B-213ENST00000593254 UBE2E1P51965 193 aa10.79□□□□□ -0.68
H3F3B-213ENST00000593254 ODF4Q2M2E3 257 aa10.79□□□□□ -0.68
H3F3B-213ENST00000593254 NCR3LG1Q68D85 454 aa10.79□□□□□ -0.68
H3F3B-213ENST00000593254 CALHM1Q8IU99 346 aa10.79□□□□□ -0.68
H3F3B-213ENST00000593254 ZNF561Q8N587 486 aa10.79□□□□□ -0.68
H3F3B-213ENST00000593254 TRUB1Q8WWH5 349 aaKnown RBP10.79□□□□□ -0.68
H3F3B-213ENST00000593254 HRASLS5Q96KN8 279 aa10.79□□□□□ -0.68
H3F3B-213ENST00000593254 PKIBQ9C010 78 aa10.79□□□□□ -0.68
H3F3B-213ENST00000593254 DPAGT1Q9H3H5 408 aa10.79□□□□□ -0.68
H3F3B-213ENST00000593254 PLEKHA1Q9HB21 404 aa10.79□□□□□ -0.68
H3F3B-213ENST00000593254 USE1Q9NZ43 259 aa10.79□□□□□ -0.68
H3F3B-213ENST00000593254 E9PQ18 207 aa10.78□□□□□ -0.68
H3F3B-213ENST00000593254 SLC1A7O00341 560 aa10.78□□□□□ -0.68
H3F3B-213ENST00000593254 EI24O14681 340 aa10.78□□□□□ -0.68
H3F3B-213ENST00000593254 SYT7O43581 403 aa10.78□□□□□ -0.68
H3F3B-213ENST00000593254 NXPH2O95156 264 aa10.78□□□□□ -0.68
H3F3B-213ENST00000593254 PRDX2P32119 198 aa10.78□□□□□ -0.68
H3F3B-213ENST00000593254 SAA4P35542 130 aa10.78□□□□□ -0.68
H3F3B-213ENST00000593254 CAPZA1P52907 286 aa10.78□□□□□ -0.68
H3F3B-213ENST00000593254 ERVK11-1P61568 191 aa10.78□□□□□ -0.68
H3F3B-213ENST00000593254 ZNF85Q03923 595 aa10.78□□□□□ -0.68
H3F3B-213ENST00000593254 ACSM1Q08AH1 577 aa10.78□□□□□ -0.68
H3F3B-213ENST00000593254 IL24Q13007 206 aa10.78□□□□□ -0.68
H3F3B-213ENST00000593254 BLMHQ13867 455 aa10.78□□□□□ -0.68
H3F3B-213ENST00000593254 KPNB1Q14974 876 aaKnown RBP10.78□□□□□ -0.68
H3F3B-213ENST00000593254 TAF9Q16594 264 aa10.78□□□□□ -0.68
H3F3B-213ENST00000593254 SLC25A30Q5SVS4 291 aa10.78□□□□□ -0.68
H3F3B-213ENST00000593254 PRSS35Q8N3Z0 413 aa10.78□□□□□ -0.68
H3F3B-213ENST00000593254 CCDC54Q8NEL0 328 aa10.78□□□□□ -0.68
H3F3B-213ENST00000593254 OR5D13Q8NGL4 314 aa10.78□□□□□ -0.68
H3F3B-213ENST00000593254 UBE2FQ969M7 185 aa10.78□□□□□ -0.68
H3F3B-213ENST00000593254 CHST5Q9GZS9 411 aa10.78□□□□□ -0.68
H3F3B-213ENST00000593254 C19orf12Q9NSK7 152 aa10.78□□□□□ -0.68
H3F3B-213ENST00000593254 IMPAD1Q9NX62 359 aa10.78□□□□□ -0.68
H3F3B-213ENST00000593254 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.78□□□□□ -0.685e-8■■□□□ 11.5
H3F3B-213ENST00000593254 LOC107986453A0A1B0GWG9 222 aa10.77□□□□□ -0.69
H3F3B-213ENST00000593254 A0A1W2PRD5 423 aa10.77□□□□□ -0.69
H3F3B-213ENST00000593254 A0A1W2PRF3 423 aa10.77□□□□□ -0.69
H3F3B-213ENST00000593254 A0A1W2PRM7 423 aa10.77□□□□□ -0.69
H3F3B-213ENST00000593254 MEIOCA2RUB1 952 aa10.77□□□□□ -0.69
H3F3B-213ENST00000593254 H3BSH0 61 aa10.77□□□□□ -0.69
H3F3B-213ENST00000593254 KIR3DL2P43630 455 aa10.77□□□□□ -0.69
H3F3B-213ENST00000593254 CEBPDP49716 269 aaPredicted RBP10.77□□□□□ -0.69
H3F3B-213ENST00000593254 ALDH3A2P51648 485 aa10.77□□□□□ -0.69
H3F3B-213ENST00000593254 RPL31P62899 125 aaKnown RBP10.77□□□□□ -0.69
H3F3B-213ENST00000593254 UBE2V2Q15819 145 aa10.77□□□□□ -0.69
H3F3B-213ENST00000593254 TP53I3Q53FA7 332 aa10.77□□□□□ -0.69
H3F3B-213ENST00000593254 HCP5Q6MZN7 132 aa10.77□□□□□ -0.69
H3F3B-213ENST00000593254 ZFP1Q6P2D0 407 aa10.77□□□□□ -0.69
H3F3B-213ENST00000593254 FAM220AQ7Z4H9 259 aa10.77□□□□□ -0.69
H3F3B-213ENST00000593254 ANGPTL5Q86XS5 388 aa10.77□□□□□ -0.69
H3F3B-213ENST00000593254 FAM185AQ8N0U4 392 aa10.77□□□□□ -0.69
H3F3B-213ENST00000593254 PNKDQ8N490 385 aa10.77□□□□□ -0.69
H3F3B-213ENST00000593254 TRMT10AQ8TBZ6 339 aaKnown RBP10.77□□□□□ -0.69
H3F3B-213ENST00000593254 C10orf35Q96D05 121 aa10.77□□□□□ -0.69
H3F3B-213ENST00000593254 GNG8Q9UK08 70 aa10.77□□□□□ -0.69
H3F3B-213ENST00000593254 VPREB3Q9UKI3 123 aa10.77□□□□□ -0.69
H3F3B-213ENST00000593254 SLC7A11Q9UPY5 501 aa10.77□□□□□ -0.69
H3F3B-213ENST00000593254 ORC6Q9Y5N6 252 aa10.77□□□□□ -0.69
H3F3B-213ENST00000593254 PLXNB1O43157 2135 aa10.76□□□□□ -0.69
H3F3B-213ENST00000593254 KIAA2026Q5HYC2 2103 aa10.76□□□□□ -0.69
H3F3B-213ENST00000593254 IGKV1-27A0A075B6S5 117 aa10.76□□□□□ -0.69
H3F3B-213ENST00000593254 FAM230AA0A1W2PPH8 454 aa10.76□□□□□ -0.69
H3F3B-213ENST00000593254 H0YAE9 185 aa10.76□□□□□ -0.69
H3F3B-213ENST00000593254 J3QRE1 110 aa10.76□□□□□ -0.69
H3F3B-213ENST00000593254 ENTPD6O75354 484 aa10.76□□□□□ -0.69
H3F3B-213ENST00000593254 GATBO75879 557 aaKnown RBP10.76□□□□□ -0.69
H3F3B-213ENST00000593254 TSPAN15O95858 294 aa10.76□□□□□ -0.69
H3F3B-213ENST00000593254 PAHP00439 452 aa10.76□□□□□ -0.69
H3F3B-213ENST00000593254 UBCP0CG48 685 aaKnown RBP10.76□□□□□ -0.69
H3F3B-213ENST00000593254 SNRPGP62308 76 aaKnown RBP10.76□□□□□ -0.69
H3F3B-213ENST00000593254 ACTC1P68032 377 aa10.76□□□□□ -0.69
H3F3B-213ENST00000593254 ACTA1P68133 377 aa10.76□□□□□ -0.69
H3F3B-213ENST00000593254 MEDAGQ5VYS4 303 aa10.76□□□□□ -0.69
H3F3B-213ENST00000593254 GDPGP1Q6ZNW5 385 aa10.76□□□□□ -0.69
H3F3B-213ENST00000593254 BATF2Q8N1L9 274 aa10.76□□□□□ -0.69
H3F3B-213ENST00000593254 C11orf42Q8N5U0 333 aa10.76□□□□□ -0.69
H3F3B-213ENST00000593254 LINC01006Q8NI28 216 aa10.76□□□□□ -0.69
H3F3B-213ENST00000593254 ADI1Q9BV57 179 aa10.76□□□□□ -0.69
H3F3B-213ENST00000593254 FAM234AQ9H0X4 552 aa10.76□□□□□ -0.69
H3F3B-213ENST00000593254 MTCH1Q9NZJ7 389 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms