RNA–Protein interactions for RNA: ENST00000592705.5

DNMT1-228, Transcript of DNA methyltransferase 1, humanhuman

TSL 1 (best)

Gene DNMT1, Length 5,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-228ENST00000592705 LGALSLQ3ZCW2 172 aaPredicted RBP11.3□□□□□ -0.6
DNMT1-228ENST00000592705 SPINK14Q6IE38 97 aa11.3□□□□□ -0.6
DNMT1-228ENST00000592705 LRRTM1Q86UE6 522 aa11.3□□□□□ -0.6
DNMT1-228ENST00000592705 TMEM105Q8N8V8 129 aa11.3□□□□□ -0.6
DNMT1-228ENST00000592705 GNRHR2Q96P88 292 aa11.3□□□□□ -0.6
DNMT1-228ENST00000592705 ACTR3CQ9C0K3 210 aaPredicted RBP11.3□□□□□ -0.6
DNMT1-228ENST00000592705 FAM234AQ9H0X4 552 aa11.3□□□□□ -0.6
DNMT1-228ENST00000592705 PSENENQ9NZ42 101 aa11.3□□□□□ -0.6
DNMT1-228ENST00000592705 ST6GALNAC2Q9UJ37 374 aa11.3□□□□□ -0.6
DNMT1-228ENST00000592705 RGPD4Q7Z3J3 1758 aa11.29□□□□□ -0.6
DNMT1-228ENST00000592705 PRR19A6NJB7 356 aa11.29□□□□□ -0.6
DNMT1-228ENST00000592705 SHISA8B8ZZ34 492 aa11.29□□□□□ -0.6
DNMT1-228ENST00000592705 SIRPB1O00241 398 aa11.29□□□□□ -0.6
DNMT1-228ENST00000592705 EFSO43281 561 aa11.29□□□□□ -0.6
DNMT1-228ENST00000592705 ACTL6AO96019 429 aa11.29□□□□□ -0.6
DNMT1-228ENST00000592705 HPXP02790 462 aa11.29□□□□□ -0.6
DNMT1-228ENST00000592705 SPINK2P20155 84 aa11.29□□□□□ -0.6
DNMT1-228ENST00000592705 GLRA1P23415 457 aa11.29□□□□□ -0.6
DNMT1-228ENST00000592705 OR10P1Q8NGE3 313 aa11.29□□□□□ -0.6
DNMT1-228ENST00000592705 RXFP4Q8TDU9 374 aa11.29□□□□□ -0.6
DNMT1-228ENST00000592705 TVP23CQ96ET8 276 aa11.29□□□□□ -0.6
DNMT1-228ENST00000592705 ARID2Q68CP9 1835 aa11.29□□□□□ -0.6
DNMT1-228ENST00000592705 NDUFB3O43676 98 aa11.29□□□□□ -0.6
DNMT1-228ENST00000592705 LANCL1O43813 399 aa11.29□□□□□ -0.6
DNMT1-228ENST00000592705 PTP4A3O75365 173 aa11.29□□□□□ -0.6
DNMT1-228ENST00000592705 RAB4AP20338 218 aa11.29□□□□□ -0.6
DNMT1-228ENST00000592705 LRRC10Q5BKY1 277 aa11.29□□□□□ -0.6
DNMT1-228ENST00000592705 SSX9Q7RTT3 188 aa11.29□□□□□ -0.6
DNMT1-228ENST00000592705 OR10G3Q8NGC4 313 aa11.29□□□□□ -0.6
DNMT1-228ENST00000592705 LHX4Q969G2 390 aa11.29□□□□□ -0.6
DNMT1-228ENST00000592705 MAGT1Q9H0U3 335 aa11.29□□□□□ -0.6
DNMT1-228ENST00000592705 PCOLCE2Q9UKZ9 415 aa11.29□□□□□ -0.6
DNMT1-228ENST00000592705 TMED3Q9Y3Q3 217 aa11.29□□□□□ -0.6
DNMT1-228ENST00000592705 SIPA1L1O43166 1804 aa11.29□□□□□ -0.6
DNMT1-228ENST00000592705 OR4C45A6NMZ5 311 aa11.29□□□□□ -0.6
DNMT1-228ENST00000592705 RER1O15258 196 aa11.29□□□□□ -0.6
DNMT1-228ENST00000592705 CSF2RBP32927 897 aa11.29□□□□□ -0.6
DNMT1-228ENST00000592705 DVL1P1P54792 670 aaPredicted RBP11.29□□□□□ -0.6
DNMT1-228ENST00000592705 GGTLC2Q14390 218 aa11.29□□□□□ -0.6
DNMT1-228ENST00000592705 LAIR2Q6ISS4 152 aa11.29□□□□□ -0.6
DNMT1-228ENST00000592705 GPR137Q96N19 417 aa11.29□□□□□ -0.6
DNMT1-228ENST00000592705 CIB3Q96Q77 187 aaPredicted RBP11.29□□□□□ -0.6
DNMT1-228ENST00000592705 FOXB1Q99853 325 aa11.29□□□□□ -0.6
DNMT1-228ENST00000592705 WDR54Q9H977 334 aa11.29□□□□□ -0.6
DNMT1-228ENST00000592705 PCDHGA9Q9Y5G4 932 aaKnown RBP11.29□□□□□ -0.6
DNMT1-228ENST00000592705 PTPRFP10586 1907 aa11.29□□□□□ -0.6
DNMT1-228ENST00000592705 RGPD3A6NKT7 1758 aaPredicted RBP11.29□□□□□ -0.6
DNMT1-228ENST00000592705 ANGPTL7O43827 346 aa11.29□□□□□ -0.6
DNMT1-228ENST00000592705 INSM1Q01101 510 aaPredicted RBP11.29□□□□□ -0.6
DNMT1-228ENST00000592705 GUK1Q16774 197 aa11.29□□□□□ -0.6
DNMT1-228ENST00000592705 PRAMEF5Q5TYX0 476 aa11.29□□□□□ -0.6
DNMT1-228ENST00000592705 PRAMEF6Q5VXH4 476 aa11.29□□□□□ -0.6
DNMT1-228ENST00000592705 OR10X1Q8NGY0 326 aa11.29□□□□□ -0.6
DNMT1-228ENST00000592705 ASB10Q8WXI3 467 aa11.29□□□□□ -0.6
DNMT1-228ENST00000592705 MCHR2Q969V1 340 aa11.29□□□□□ -0.6
DNMT1-228ENST00000592705 PIK3IP1Q96FE7 263 aa11.29□□□□□ -0.6
DNMT1-228ENST00000592705 ADAM19Q9H013 955 aa11.29□□□□□ -0.6
DNMT1-228ENST00000592705 OPN4Q9UHM6 478 aa11.29□□□□□ -0.6
DNMT1-228ENST00000592705 SH2D7A6NKC9 451 aaPredicted RBP11.28□□□□□ -0.6
DNMT1-228ENST00000592705 ERGP11308 486 aa11.28□□□□□ -0.6
DNMT1-228ENST00000592705 PPP1CAP62136 330 aa11.28□□□□□ -0.6
DNMT1-228ENST00000592705 CD226Q15762 336 aa11.28□□□□□ -0.6
DNMT1-228ENST00000592705 RBMXL3Q8N7X1 1067 aaKnown RBP11.28□□□□□ -0.6
DNMT1-228ENST00000592705 AKR7LQ8NHP1 331 aa11.28□□□□□ -0.6
DNMT1-228ENST00000592705 SAP25Q8TEE9 199 aa11.28□□□□□ -0.6
DNMT1-228ENST00000592705 DTYMKP23919 212 aa11.28□□□□□ -0.6
DNMT1-228ENST00000592705 RPL11P62913 178 aaKnown RBP11.28□□□□□ -0.6
DNMT1-228ENST00000592705 H3F3AP84243 136 aa11.28□□□□□ -0.6
DNMT1-228ENST00000592705 RAB32Q13637 225 aa11.28□□□□□ -0.6
DNMT1-228ENST00000592705 CEACAM16Q2WEN9 425 aa11.28□□□□□ -0.6
DNMT1-228ENST00000592705 BVESQ8NE79 360 aa11.28□□□□□ -0.6
DNMT1-228ENST00000592705 ZNF426Q9BUY5 554 aa11.28□□□□□ -0.6
DNMT1-228ENST00000592705 SPRY3O43610 288 aa11.28□□□□□ -0.6
DNMT1-228ENST00000592705 MIDNQ504T8 468 aa11.28□□□□□ -0.6
DNMT1-228ENST00000592705 DMRTC1Q5HYR2 192 aa11.28□□□□□ -0.6
DNMT1-228ENST00000592705 CLEC2AQ6UVW9 174 aa11.28□□□□□ -0.6
DNMT1-228ENST00000592705 LINC00052Q96N35 136 aa11.28□□□□□ -0.6
DNMT1-228ENST00000592705 OR3A4PP47883 348 aa11.28□□□□□ -0.6
DNMT1-228ENST00000592705 ACOT6Q3I5F7 207 aaPredicted RBP11.28□□□□□ -0.6
DNMT1-228ENST00000592705 ZAR1Q86SH2 424 aa11.28□□□□□ -0.6
DNMT1-228ENST00000592705 STPG2Q8N412 459 aa11.28□□□□□ -0.6
DNMT1-228ENST00000592705 OR4F5Q8NH21 305 aa11.28□□□□□ -0.6
DNMT1-228ENST00000592705 RPS4Y2Q8TD47 263 aa11.28□□□□□ -0.6
DNMT1-228ENST00000592705 APOBEC3DQ96AK3 386 aaPredicted RBP11.28□□□□□ -0.6
DNMT1-228ENST00000592705 GUCD1Q96NT3 240 aa11.28□□□□□ -0.6
DNMT1-228ENST00000592705 OR4F4Q96R69 305 aa11.28□□□□□ -0.6
DNMT1-228ENST00000592705 TRAF4Q9BUZ4 470 aaPredicted RBP11.28□□□□□ -0.6
DNMT1-228ENST00000592705 ZNF230Q9UIE0 474 aaPredicted RBP11.28□□□□□ -0.6
DNMT1-228ENST00000592705 C16orf97H3BN30 126 aa11.27□□□□□ -0.6
DNMT1-228ENST00000592705 GREM1O60565 184 aa11.27□□□□□ -0.6
DNMT1-228ENST00000592705 IAPPP10997 89 aa11.27□□□□□ -0.6
DNMT1-228ENST00000592705 PRF1P14222 555 aa11.27□□□□□ -0.6
DNMT1-228ENST00000592705 COX5AP20674 150 aa11.27□□□□□ -0.6
DNMT1-228ENST00000592705 PEBP1P30086 187 aaKnown RBP11.27□□□□□ -0.6
DNMT1-228ENST00000592705 CXorf58Q96LI9 332 aa11.27□□□□□ -0.6
DNMT1-228ENST00000592705 NMES1Q9C002 83 aa11.27□□□□□ -0.6
DNMT1-228ENST00000592705 METTL15P1P0C7V9 234 aa11.27□□□□□ -0.61
DNMT1-228ENST00000592705 INPP5JQ15735 1006 aaPredicted RBP11.27□□□□□ -0.61
DNMT1-228ENST00000592705 CABLES2Q9BTV7 478 aa11.27□□□□□ -0.61
DNMT1-228ENST00000592705 ELF5Q9UKW6 265 aaPredicted RBP11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms