RNA–Protein interactions for RNA: ENST00000589941.1

SMAD4-209, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-209ENST00000589941 FAM69AQ5T7M9 428 aa6.49□□□□□ -1.37
SMAD4-209ENST00000589941 BCL2L15Q5TBC7 163 aa6.49□□□□□ -1.37
SMAD4-209ENST00000589941 ABLIM2Q6H8Q1 611 aa6.49□□□□□ -1.37
SMAD4-209ENST00000589941 ZNF836Q6ZNA1 936 aa6.49□□□□□ -1.37
SMAD4-209ENST00000589941 SLC51BQ86UW2 128 aa6.49□□□□□ -1.37
SMAD4-209ENST00000589941 SYS1Q8N2H4 156 aa6.49□□□□□ -1.37
SMAD4-209ENST00000589941 UBE2J2Q8N2K1 259 aa6.49□□□□□ -1.37
SMAD4-209ENST00000589941 SPICQ8N5J4 248 aa6.49□□□□□ -1.37
SMAD4-209ENST00000589941 TEX29Q8N6K0 151 aa6.49□□□□□ -1.37
SMAD4-209ENST00000589941 OR4K14Q8NGD5 310 aa6.49□□□□□ -1.37
SMAD4-209ENST00000589941 OR5W2Q8NH69 310 aa6.49□□□□□ -1.37
SMAD4-209ENST00000589941 OR56B4Q8NH76 319 aa6.49□□□□□ -1.37
SMAD4-209ENST00000589941 TRMT10AQ8TBZ6 339 aaKnown RBP6.49□□□□□ -1.37
SMAD4-209ENST00000589941 SMIM4Q8WVI0 70 aa6.49□□□□□ -1.37
SMAD4-209ENST00000589941 RBMXL1Q96E39 390 aaKnown RBP6.49□□□□□ -1.37
SMAD4-209ENST00000589941 C16orf58Q96GQ5 468 aa6.49□□□□□ -1.37
SMAD4-209ENST00000589941 SAMD8Q96LT4 415 aa6.49□□□□□ -1.37
SMAD4-209ENST00000589941 MS4A4EQ96PG1 132 aa6.49□□□□□ -1.37
SMAD4-209ENST00000589941 ZNF426Q9BUY5 554 aa6.49□□□□□ -1.37
SMAD4-209ENST00000589941 ZNF350Q9GZX5 532 aa6.49□□□□□ -1.37
SMAD4-209ENST00000589941 HDHD2Q9H0R4 259 aa6.49□□□□□ -1.37
SMAD4-209ENST00000589941 OR52D1Q9H346 318 aa6.49□□□□□ -1.37
SMAD4-209ENST00000589941 ZNF665Q9H7R5 613 aa6.49□□□□□ -1.37
SMAD4-209ENST00000589941 ADGRL4Q9HBW9 690 aa6.49□□□□□ -1.37
SMAD4-209ENST00000589941 POLE3Q9NRF9 147 aa6.49□□□□□ -1.37
SMAD4-209ENST00000589941 C1RLQ9NZP8 487 aa6.49□□□□□ -1.37
SMAD4-209ENST00000589941 PRODH2Q9UF12 536 aa6.49□□□□□ -1.37
SMAD4-209ENST00000589941 FBXO9Q9UK97 447 aaPredicted RBP6.49□□□□□ -1.37
SMAD4-209ENST00000589941 SLC13A4Q9UKG4 626 aa6.49□□□□□ -1.37
SMAD4-209ENST00000589941 SPATA2Q9UM82 520 aa6.49□□□□□ -1.37
SMAD4-209ENST00000589941 RASD1Q9Y272 281 aa6.49□□□□□ -1.37
SMAD4-209ENST00000589941 SIGLEC7Q9Y286 467 aa6.49□□□□□ -1.37
SMAD4-209ENST00000589941 SLC35A3Q9Y2D2 325 aa6.49□□□□□ -1.37
SMAD4-209ENST00000589941 ABCA13Q86UQ4 5058 aa6.48□□□□□ -1.37
SMAD4-209ENST00000589941 IGHV3OR16-10A0A075B7F0 116 aa6.48□□□□□ -1.37
SMAD4-209ENST00000589941 A0A087WV62 115 aa6.48□□□□□ -1.37
SMAD4-209ENST00000589941 ARPC4-TTLL3A0A0A6YYG9 625 aa6.48□□□□□ -1.37
SMAD4-209ENST00000589941 NAP1L6A6NFF2 107 aa6.48□□□□□ -1.37
SMAD4-209ENST00000589941 LRRN3E7EW58 273 aa6.48□□□□□ -1.37
SMAD4-209ENST00000589941 E9PI62 339 aa6.48□□□□□ -1.37
SMAD4-209ENST00000589941 H0YL77 283 aa6.48□□□□□ -1.37
SMAD4-209ENST00000589941 SMLR1H3BR10 107 aa6.48□□□□□ -1.37
SMAD4-209ENST00000589941 J3QLI3 93 aa6.48□□□□□ -1.37
SMAD4-209ENST00000589941 K7EIL1 84 aa6.48□□□□□ -1.37
SMAD4-209ENST00000589941 MPC2O95563 127 aa6.48□□□□□ -1.37
SMAD4-209ENST00000589941 PPP1R3DO95685 299 aa6.48□□□□□ -1.37
SMAD4-209ENST00000589941 AK1P00568 194 aa6.48□□□□□ -1.37
SMAD4-209ENST00000589941 SERPINA3P01011 423 aa6.48□□□□□ -1.37
SMAD4-209ENST00000589941 IFNA7P01567 189 aa6.48□□□□□ -1.37
SMAD4-209ENST00000589941 ATP1B1P05026 303 aa6.48□□□□□ -1.37
SMAD4-209ENST00000589941 IL5P05113 134 aa6.48□□□□□ -1.37
SMAD4-209ENST00000589941 SBK2P0C263 348 aa6.48□□□□□ -1.37
SMAD4-209ENST00000589941 RRASP10301 218 aa6.48□□□□□ -1.37
SMAD4-209ENST00000589941 HTR2AP28223 471 aa6.48□□□□□ -1.37
SMAD4-209ENST00000589941 MPIP34949 423 aa6.48□□□□□ -1.37
SMAD4-209ENST00000589941 ZP1P60852 638 aa6.48□□□□□ -1.37
SMAD4-209ENST00000589941 FHL1Q13642 323 aa6.48□□□□□ -1.37
SMAD4-209ENST00000589941 GRK1Q15835 563 aa6.48□□□□□ -1.37
SMAD4-209ENST00000589941 LGALSLQ3ZCW2 172 aaPredicted RBP6.48□□□□□ -1.37
SMAD4-209ENST00000589941 CLEC12AQ5QGZ9 265 aa6.48□□□□□ -1.37
SMAD4-209ENST00000589941 ZCCHC12Q6PEW1 402 aa6.48□□□□□ -1.37
SMAD4-209ENST00000589941 WDR88Q6ZMY6 472 aa6.48□□□□□ -1.37
SMAD4-209ENST00000589941 UTS2BQ765I0 119 aa6.48□□□□□ -1.37
SMAD4-209ENST00000589941 RRM2BQ7LG56 351 aa6.48□□□□□ -1.37
SMAD4-209ENST00000589941 GPAT4Q86UL3 456 aa6.48□□□□□ -1.37
SMAD4-209ENST00000589941 ZNF100Q8IYN0 542 aa6.48□□□□□ -1.37
SMAD4-209ENST00000589941 SLC38A6Q8IZM9 456 aa6.48□□□□□ -1.37
SMAD4-209ENST00000589941 LSMEM1Q8N8F7 131 aa6.48□□□□□ -1.37
SMAD4-209ENST00000589941 SAMD12Q8N8I0 201 aa6.48□□□□□ -1.37
SMAD4-209ENST00000589941 GATSQ8NAP1 163 aa6.48□□□□□ -1.37
SMAD4-209ENST00000589941 OR8H1Q8NGG4 311 aa6.48□□□□□ -1.37
SMAD4-209ENST00000589941 OR51G2Q8NGK0 314 aa6.48□□□□□ -1.37
SMAD4-209ENST00000589941 FANK1Q8TC84 345 aa6.48□□□□□ -1.37
SMAD4-209ENST00000589941 TMEM255BQ8WV15 326 aa6.48□□□□□ -1.37
SMAD4-209ENST00000589941 PTP4A1Q93096 173 aa6.48□□□□□ -1.37
SMAD4-209ENST00000589941 CPNE4Q96A23 557 aaPredicted RBP6.48□□□□□ -1.37
SMAD4-209ENST00000589941 KTI12Q96EK9 354 aaPredicted RBP6.48□□□□□ -1.37
SMAD4-209ENST00000589941 TEAD3Q99594 435 aa6.48□□□□□ -1.37
SMAD4-209ENST00000589941 HCAR1Q9BXC0 346 aa6.48□□□□□ -1.37
SMAD4-209ENST00000589941 BEX1Q9HBH7 125 aa6.48□□□□□ -1.37
SMAD4-209ENST00000589941 SLC17A5Q9NRA2 495 aa6.48□□□□□ -1.37
SMAD4-209ENST00000589941 TNFRSF19Q9NS68 423 aa6.48□□□□□ -1.37
SMAD4-209ENST00000589941 NUDT15Q9NV35 164 aa6.48□□□□□ -1.37
SMAD4-209ENST00000589941 KIF25Q9UIL4 384 aa6.48□□□□□ -1.37
SMAD4-209ENST00000589941 MGAT4AQ9UM21 535 aa6.48□□□□□ -1.37
SMAD4-209ENST00000589941 DAPL1A0PJW8 107 aa6.47□□□□□ -1.37
SMAD4-209ENST00000589941 CLPSL1A2RUU4 121 aa6.47□□□□□ -1.37
SMAD4-209ENST00000589941 ZSCAN5BA6NJL1 495 aa6.47□□□□□ -1.37
SMAD4-209ENST00000589941 SULT1B1O43704 296 aa6.47□□□□□ -1.37
SMAD4-209ENST00000589941 FCMRO60667 390 aa6.47□□□□□ -1.37
SMAD4-209ENST00000589941 PEX14O75381 377 aa6.47□□□□□ -1.37
SMAD4-209ENST00000589941 RP2O75695 350 aa6.47□□□□□ -1.37
SMAD4-209ENST00000589941 ARL6IP5O75915 188 aa6.47□□□□□ -1.37
SMAD4-209ENST00000589941 OR2A4O95047 310 aa6.47□□□□□ -1.37
SMAD4-209ENST00000589941 CH25HO95992 272 aa6.47□□□□□ -1.37
SMAD4-209ENST00000589941 NGFP01138 241 aa6.47□□□□□ -1.37
SMAD4-209ENST00000589941 IGKV1D-16P01601 117 aa6.47□□□□□ -1.37
SMAD4-209ENST00000589941 DBIP07108 87 aaKnown RBP6.47□□□□□ -1.37
SMAD4-209ENST00000589941 UBL4AP11441 157 aa6.47□□□□□ -1.37
SMAD4-209ENST00000589941 ATF1P18846 271 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms