RNA–Protein interactions for RNA: ENST00000589797.5

RETREG3-208, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 4,149 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-208ENST00000589797 UNQ9370/PRO34162Q6UXP9 181 aa12.78□□□□□ -0.36
RETREG3-208ENST00000589797 ST7LQ8TDW4 575 aa12.78□□□□□ -0.36
RETREG3-208ENST00000589797 GUCD1Q96NT3 240 aa12.78□□□□□ -0.36
RETREG3-208ENST00000589797 SPIN2AQ99865 258 aa12.78□□□□□ -0.36
RETREG3-208ENST00000589797 SPIN2BQ9BPZ2 258 aa12.78□□□□□ -0.36
RETREG3-208ENST00000589797 ANGPTL4Q9BY76 406 aa12.78□□□□□ -0.36
RETREG3-208ENST00000589797 M0R1B8 84 aa12.77□□□□□ -0.36
RETREG3-208ENST00000589797 IFNA17P01571 189 aa12.77□□□□□ -0.36
RETREG3-208ENST00000589797 RTL6Q6ICC9 239 aa12.77□□□□□ -0.36
RETREG3-208ENST00000589797 ARHGEF39Q8N4T4 335 aa12.77□□□□□ -0.36
RETREG3-208ENST00000589797 GPX8Q8TED1 209 aa12.77□□□□□ -0.36
RETREG3-208ENST00000589797 TTTY12Q9BZ98 90 aa12.77□□□□□ -0.36
RETREG3-208ENST00000589797 C9orf170A2RU37 121 aa12.77□□□□□ -0.36
RETREG3-208ENST00000589797 CST7O76096 145 aa12.77□□□□□ -0.36
RETREG3-208ENST00000589797 S100A9P06702 114 aaKnown RBP12.77□□□□□ -0.36
RETREG3-208ENST00000589797 FUT3P21217 361 aa12.77□□□□□ -0.36
RETREG3-208ENST00000589797 LSM6P62312 80 aaKnown RBP12.77□□□□□ -0.36
RETREG3-208ENST00000589797 ZNF92Q03936 586 aa12.77□□□□□ -0.36
RETREG3-208ENST00000589797 FNDC7Q5VTL7 733 aa12.77□□□□□ -0.36
RETREG3-208ENST00000589797 ACOT7LQ6ZUV0 252 aa12.77□□□□□ -0.36
RETREG3-208ENST00000589797 C1QL2Q7Z5L3 287 aa12.77□□□□□ -0.36
RETREG3-208ENST00000589797 KCNRGQ8N5I3 272 aa12.77□□□□□ -0.36
RETREG3-208ENST00000589797 FAM181AQ8N9Y4 354 aa12.77□□□□□ -0.36
RETREG3-208ENST00000589797 APOBEC3DQ96AK3 386 aaPredicted RBP12.77□□□□□ -0.36
RETREG3-208ENST00000589797 SGK3Q96BR1 496 aa12.77□□□□□ -0.36
RETREG3-208ENST00000589797 SARAFQ96BY9 339 aa12.77□□□□□ -0.36
RETREG3-208ENST00000589797 CNTNAP3BQ96NU0 1288 aa12.77□□□□□ -0.36
RETREG3-208ENST00000589797 G6PC2Q9NQR9 355 aa12.77□□□□□ -0.36
RETREG3-208ENST00000589797 TMEM38BQ9NVV0 291 aa12.77□□□□□ -0.36
RETREG3-208ENST00000589797 TECTAO75443 2155 aa12.77□□□□□ -0.37
RETREG3-208ENST00000589797 NOTCH2Q04721 2471 aa12.77□□□□□ -0.37
RETREG3-208ENST00000589797 IL5P05113 134 aa12.77□□□□□ -0.37
RETREG3-208ENST00000589797 ARR3P36575 388 aa12.77□□□□□ -0.37
RETREG3-208ENST00000589797 ZNF83P51522 516 aa12.77□□□□□ -0.37
RETREG3-208ENST00000589797 SNTB1Q13884 538 aaKnown RBP12.77□□□□□ -0.37
RETREG3-208ENST00000589797 PXDC1Q5TGL8 231 aa12.77□□□□□ -0.37
RETREG3-208ENST00000589797 DPPA2Q7Z7J5 298 aa12.77□□□□□ -0.37
RETREG3-208ENST00000589797 LGI3Q8N145 548 aa12.77□□□□□ -0.37
RETREG3-208ENST00000589797 C9orf62Q8N4C0 152 aa12.77□□□□□ -0.37
RETREG3-208ENST00000589797 SCARB1Q8WTV0 552 aa12.77□□□□□ -0.37
RETREG3-208ENST00000589797 CMTM3Q96MX0 182 aa12.77□□□□□ -0.37
RETREG3-208ENST00000589797 IP6K3Q96PC2 410 aa12.77□□□□□ -0.37
RETREG3-208ENST00000589797 C20orf24Q9BUV8 137 aa12.77□□□□□ -0.37
RETREG3-208ENST00000589797 GSTZ1O43708 216 aaPredicted RBP12.77□□□□□ -0.37
RETREG3-208ENST00000589797 IGF2P01344 180 aa12.77□□□□□ -0.37
RETREG3-208ENST00000589797 SNRNP70P08621 437 aaKnown RBP12.77□□□□□ -0.37
RETREG3-208ENST00000589797 SULT1A3P0DMM9 295 aa12.77□□□□□ -0.37
RETREG3-208ENST00000589797 SULT1A4P0DMN0 295 aa12.77□□□□□ -0.37
RETREG3-208ENST00000589797 RPS27AP62979 156 aaKnown RBP12.77□□□□□ -0.37
RETREG3-208ENST00000589797 UBA52P62987 128 aaKnown RBP12.77□□□□□ -0.37
RETREG3-208ENST00000589797 ZP4Q12836 540 aa12.77□□□□□ -0.37
RETREG3-208ENST00000589797 RAB32Q13637 225 aa12.77□□□□□ -0.37
RETREG3-208ENST00000589797 OR8G2PQ6IF36 304 aa12.77□□□□□ -0.37
RETREG3-208ENST00000589797 SLC30A7Q8NEW0 376 aa12.77□□□□□ -0.37
RETREG3-208ENST00000589797 SAV1Q9H4B6 383 aaPredicted RBP12.77□□□□□ -0.37
RETREG3-208ENST00000589797 CHD9Q3L8U1 2897 aa12.76□□□□□ -0.37
RETREG3-208ENST00000589797 SERPINE3A8MV23 424 aa12.76□□□□□ -0.37
RETREG3-208ENST00000589797 ZNF250P15622 560 aa12.76□□□□□ -0.37
RETREG3-208ENST00000589797 SUCLG1P53597 346 aaKnown RBP12.76□□□□□ -0.37
RETREG3-208ENST00000589797 EIF3IQ13347 325 aaKnown RBP12.76□□□□□ -0.37
RETREG3-208ENST00000589797 OR6K3Q8NGY3 331 aa12.76□□□□□ -0.37
RETREG3-208ENST00000589797 ZNF649Q9BS31 505 aa12.76□□□□□ -0.37
RETREG3-208ENST00000589797 PLCE1Q9P212 2302 aa12.76□□□□□ -0.37
RETREG3-208ENST00000589797 OR6C65A6NJZ3 312 aa12.76□□□□□ -0.37
RETREG3-208ENST00000589797 CEBPZOSA8MTT3 80 aa12.76□□□□□ -0.37
RETREG3-208ENST00000589797 DEFB108AA8MXU0 73 aa12.76□□□□□ -0.37
RETREG3-208ENST00000589797 C17orf82Q86X59 251 aaPredicted RBP12.76□□□□□ -0.37
RETREG3-208ENST00000589797 WFDC8Q8IUA0 241 aa12.76□□□□□ -0.37
RETREG3-208ENST00000589797 ST8SIA2Q92186 375 aa12.76□□□□□ -0.37
RETREG3-208ENST00000589797 SPSB1Q96BD6 273 aa12.76□□□□□ -0.37
RETREG3-208ENST00000589797 KIRREL1Q96J84 757 aa12.76□□□□□ -0.37
RETREG3-208ENST00000589797 OR2H1Q9GZK4 316 aa12.76□□□□□ -0.37
RETREG3-208ENST00000589797 RPS10P5Q9NQ39 176 aa12.76□□□□□ -0.37
RETREG3-208ENST00000589797 STARD10Q9Y365 291 aa12.76□□□□□ -0.37
RETREG3-208ENST00000589797 J3QRE1 110 aa12.76□□□□□ -0.37
RETREG3-208ENST00000589797 TOR1AO14656 332 aa12.76□□□□□ -0.37
RETREG3-208ENST00000589797 NME2P1O60361 137 aa12.76□□□□□ -0.37
RETREG3-208ENST00000589797 ZNF169Q14929 603 aaPredicted RBP12.76□□□□□ -0.37
RETREG3-208ENST00000589797 OR8B8Q15620 311 aa12.76□□□□□ -0.37
RETREG3-208ENST00000589797 OIT3Q8WWZ8 545 aa12.76□□□□□ -0.37
RETREG3-208ENST00000589797 FBXO17Q96EF6 278 aa12.76□□□□□ -0.37
RETREG3-208ENST00000589797 OPN4Q9UHM6 478 aa12.76□□□□□ -0.37
RETREG3-208ENST00000589797 NCOR2Q9Y618 2525 aa12.76□□□□□ -0.37
RETREG3-208ENST00000589797 ACACBO00763 2458 aa12.75□□□□□ -0.37
RETREG3-208ENST00000589797 TTLL8A6PVC2 850 aa12.75□□□□□ -0.37
RETREG3-208ENST00000589797 SIGLEC5O15389 551 aa12.75□□□□□ -0.37
RETREG3-208ENST00000589797 ZIC3O60481 467 aa12.75□□□□□ -0.37
RETREG3-208ENST00000589797 CLDN1O95832 211 aa12.75□□□□□ -0.37
RETREG3-208ENST00000589797 CLPSP04118 112 aa12.75□□□□□ -0.37
RETREG3-208ENST00000589797 TLE1Q04724 770 aa12.75□□□□□ -0.37
RETREG3-208ENST00000589797 MRPL14Q6P1L8 145 aaKnown RBP12.75□□□□□ -0.37
RETREG3-208ENST00000589797 SLC25A47Q6Q0C1 308 aa12.75□□□□□ -0.37
RETREG3-208ENST00000589797 PECRQ9BY49 303 aa12.75□□□□□ -0.37
RETREG3-208ENST00000589797 ENY2Q9NPA8 101 aa12.75□□□□□ -0.37
RETREG3-208ENST00000589797 FAM206AQ9NX38 181 aa12.75□□□□□ -0.37
RETREG3-208ENST00000589797 IGF2RP11717 2491 aa12.75□□□□□ -0.37
RETREG3-208ENST00000589797 CTDSPLO15194 276 aa12.75□□□□□ -0.37
RETREG3-208ENST00000589797 KLF7O75840 302 aaPredicted RBP12.75□□□□□ -0.37
RETREG3-208ENST00000589797 CFDP00746 253 aaPredicted RBP12.75□□□□□ -0.37
RETREG3-208ENST00000589797 C11orf87Q6NUJ2 197 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms