RNA–Protein interactions for RNA: ENST00000589753.1

ATG4D-211, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-211ENST00000589753 ZNF488Q96MN9 340 aa12.77□□□□□ -0.37
ATG4D-211ENST00000589753 NRIP2Q9BQI9 281 aa12.77□□□□□ -0.37
ATG4D-211ENST00000589753 METTL9Q9H1A3 318 aa12.77□□□□□ -0.37
ATG4D-211ENST00000589753 DCSTAMPQ9H295 470 aa12.77□□□□□ -0.37
ATG4D-211ENST00000589753 ELL3Q9HB65 397 aaPredicted RBP12.77□□□□□ -0.37
ATG4D-211ENST00000589753 NPTNQ9Y639 398 aa12.77□□□□□ -0.37
ATG4D-211ENST00000589753 ZNF701M0R085 212 aaPredicted RBP12.76□□□□□ -0.37
ATG4D-211ENST00000589753 AIPO00170 330 aa12.76□□□□□ -0.37
ATG4D-211ENST00000589753 UBBP0CG47 229 aa12.76□□□□□ -0.37
ATG4D-211ENST00000589753 GLRA1P23415 457 aa12.76□□□□□ -0.37
ATG4D-211ENST00000589753 CFPP27918 469 aa12.76□□□□□ -0.37
ATG4D-211ENST00000589753 RANBP1P43487 201 aa12.76□□□□□ -0.37
ATG4D-211ENST00000589753 NPBWR2P48146 333 aa12.76□□□□□ -0.37
ATG4D-211ENST00000589753 DSCR9P59020 149 aa12.76□□□□□ -0.37
ATG4D-211ENST00000589753 GMFBP60983 142 aa12.76□□□□□ -0.37
ATG4D-211ENST00000589753 ERVK11-1P61568 191 aa12.76□□□□□ -0.37
ATG4D-211ENST00000589753 HOXA4Q00056 320 aaPredicted RBP12.76□□□□□ -0.37
ATG4D-211ENST00000589753 RSU1Q15404 277 aa12.76□□□□□ -0.37
ATG4D-211ENST00000589753 FAM201AQ5SY85 155 aa12.76□□□□□ -0.37
ATG4D-211ENST00000589753 CLEC2AQ6UVW9 174 aa12.76□□□□□ -0.37
ATG4D-211ENST00000589753 CROCCP3Q8IVE0 287 aa12.76□□□□□ -0.37
ATG4D-211ENST00000589753 TBC1D15Q8TC07 691 aa12.76□□□□□ -0.37
ATG4D-211ENST00000589753 SLC25A28Q96A46 364 aa12.76□□□□□ -0.37
ATG4D-211ENST00000589753 TIMD4Q96H15 378 aa12.76□□□□□ -0.37
ATG4D-211ENST00000589753 RHOFQ9HBH0 211 aa12.76□□□□□ -0.37
ATG4D-211ENST00000589753 RASL12Q9NYN1 266 aa12.76□□□□□ -0.37
ATG4D-211ENST00000589753 IL36GQ9NZH8 169 aa12.76□□□□□ -0.37
ATG4D-211ENST00000589753 GHRLQ9UBU3 117 aa12.76□□□□□ -0.37
ATG4D-211ENST00000589753 STEAP1Q9UHE8 339 aa12.76□□□□□ -0.37
ATG4D-211ENST00000589753 PPIAL4EA0A075B759 164 aa12.75□□□□□ -0.37
ATG4D-211ENST00000589753 PPIAL4DF5H284 164 aa12.75□□□□□ -0.37
ATG4D-211ENST00000589753 F8VVB4 439 aa12.75□□□□□ -0.37
ATG4D-211ENST00000589753 F8VWA3 439 aa12.75□□□□□ -0.37
ATG4D-211ENST00000589753 WNT9BO14905 357 aa12.75□□□□□ -0.37
ATG4D-211ENST00000589753 PPIHO43447 177 aaKnown RBP12.75□□□□□ -0.37
ATG4D-211ENST00000589753 ZNF780AO75290 641 aaPredicted RBP12.75□□□□□ -0.37
ATG4D-211ENST00000589753 NXPH2O95156 264 aa12.75□□□□□ -0.37
ATG4D-211ENST00000589753 ZNF205O95201 554 aa12.75□□□□□ -0.37
ATG4D-211ENST00000589753 SFTPBP07988 381 aa12.75□□□□□ -0.37
ATG4D-211ENST00000589753 PPIAL4FP0DN26 164 aa12.75□□□□□ -0.37
ATG4D-211ENST00000589753 SLC2A2P11168 524 aaPredicted RBP12.75□□□□□ -0.37
ATG4D-211ENST00000589753 CD80P33681 288 aa12.75□□□□□ -0.37
ATG4D-211ENST00000589753 CLDN12P56749 244 aa12.75□□□□□ -0.37
ATG4D-211ENST00000589753 BTG1P62324 171 aa12.75□□□□□ -0.37
ATG4D-211ENST00000589753 GPR176Q14439 515 aa12.75□□□□□ -0.37
ATG4D-211ENST00000589753 P2RY14Q15391 338 aa12.75□□□□□ -0.37
ATG4D-211ENST00000589753 DGUOKQ16854 277 aa12.75□□□□□ -0.37
ATG4D-211ENST00000589753 SFRP4Q6FHJ7 346 aaPredicted RBP12.75□□□□□ -0.37
ATG4D-211ENST00000589753 OR10K1Q8NGX5 313 aa12.75□□□□□ -0.37
ATG4D-211ENST00000589753 FAM168AQ92567 244 aa12.75□□□□□ -0.37
ATG4D-211ENST00000589753 RAB1CQ92928 201 aa12.75□□□□□ -0.37
ATG4D-211ENST00000589753 EMG1Q92979 244 aaKnown RBP12.75□□□□□ -0.37
ATG4D-211ENST00000589753 SLC25A46Q96AG3 418 aa12.75□□□□□ -0.37
ATG4D-211ENST00000589753 DGCR14Q96DF8 476 aaKnown RBP12.75□□□□□ -0.37
ATG4D-211ENST00000589753 WDR13Q9H1Z4 485 aa12.75□□□□□ -0.37
ATG4D-211ENST00000589753 HES4Q9HCC6 221 aa12.75□□□□□ -0.37
ATG4D-211ENST00000589753 BATF3Q9NR55 127 aa12.75□□□□□ -0.37
ATG4D-211ENST00000589753 PCDHB16Q9NRJ7 776 aa12.75□□□□□ -0.37
ATG4D-211ENST00000589753 RBFOX1Q9NWB1 397 aaKnown RBP12.75□□□□□ -0.37
ATG4D-211ENST00000589753 DAPK2Q9UIK4 370 aa12.75□□□□□ -0.37
ATG4D-211ENST00000589753 PPIAL4AQ9Y536 164 aa12.75□□□□□ -0.37
ATG4D-211ENST00000589753 USF3Q68DE3 2245 aa12.74□□□□□ -0.37
ATG4D-211ENST00000589753 APCP25054 2843 aa12.74□□□□□ -0.37
ATG4D-211ENST00000589753 UNC79Q9P2D8 2635 aa12.74□□□□□ -0.37
ATG4D-211ENST00000589753 OOEPA6NGQ2 149 aa12.74□□□□□ -0.37
ATG4D-211ENST00000589753 C3orf80F5H4A9 247 aa12.74□□□□□ -0.37
ATG4D-211ENST00000589753 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.74□□□□□ -0.37
ATG4D-211ENST00000589753 LGALS8O00214 317 aa12.74□□□□□ -0.37
ATG4D-211ENST00000589753 NDUFS8O00217 210 aa12.74□□□□□ -0.37
ATG4D-211ENST00000589753 HTR3BO95264 441 aa12.74□□□□□ -0.37
ATG4D-211ENST00000589753 BPNT1O95861 308 aa12.74□□□□□ -0.37
ATG4D-211ENST00000589753 CSTBP04080 98 aaKnown RBP12.74□□□□□ -0.37
ATG4D-211ENST00000589753 ARSBP15848 533 aa12.74□□□□□ -0.37
ATG4D-211ENST00000589753 SERPINA2P20848 420 aa12.74□□□□□ -0.37
ATG4D-211ENST00000589753 GIFP27352 417 aa12.74□□□□□ -0.37
ATG4D-211ENST00000589753 GPR6P46095 362 aaPredicted RBP12.74□□□□□ -0.37
ATG4D-211ENST00000589753 RORCP51449 518 aa12.74□□□□□ -0.37
ATG4D-211ENST00000589753 BMXP51813 675 aa12.74□□□□□ -0.37
ATG4D-211ENST00000589753 CLEC12BQ2HXU8 276 aa12.74□□□□□ -0.37
ATG4D-211ENST00000589753 SMIM21Q3B7S5 101 aa12.74□□□□□ -0.37
ATG4D-211ENST00000589753 SLC22A6Q4U2R8 563 aa12.74□□□□□ -0.37
ATG4D-211ENST00000589753 Q5PR19 223 aa12.74□□□□□ -0.37
ATG4D-211ENST00000589753 AVPI1Q5T686 147 aa12.74□□□□□ -0.37
ATG4D-211ENST00000589753 IDNKQ5T6J7 187 aa12.74□□□□□ -0.37
ATG4D-211ENST00000589753 TEX36Q5VZQ5 186 aa12.74□□□□□ -0.37
ATG4D-211ENST00000589753 ELP2Q6IA86 826 aa12.74□□□□□ -0.37
ATG4D-211ENST00000589753 ACP7Q6ZNF0 438 aa12.74□□□□□ -0.37
ATG4D-211ENST00000589753 DNM1P46Q6ZS02 220 aa12.74□□□□□ -0.37
ATG4D-211ENST00000589753 FAM58AQ8N1B3 248 aa12.74□□□□□ -0.37
ATG4D-211ENST00000589753 C19orf18Q8NEA5 215 aa12.74□□□□□ -0.37
ATG4D-211ENST00000589753 OR51D1Q8NGF3 324 aa12.74□□□□□ -0.37
ATG4D-211ENST00000589753 C10orf105Q8TEF2 133 aa12.74□□□□□ -0.37
ATG4D-211ENST00000589753 FAM3DQ96BQ1 224 aa12.74□□□□□ -0.37
ATG4D-211ENST00000589753 SEH1LQ96EE3 360 aa12.74□□□□□ -0.37
ATG4D-211ENST00000589753 C1orf147Q96MC9 270 aaPredicted RBP12.74□□□□□ -0.37
ATG4D-211ENST00000589753 FOXC2Q99958 501 aa12.74□□□□□ -0.37
ATG4D-211ENST00000589753 PIMREGQ9BSJ6 248 aa12.74□□□□□ -0.37
ATG4D-211ENST00000589753 LIN7BQ9HAP6 207 aa12.74□□□□□ -0.37
ATG4D-211ENST00000589753 DNAJB11Q9UBS4 358 aa12.74□□□□□ -0.37
ATG4D-211ENST00000589753 WIPI2Q9Y4P8 454 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms