RNA–Protein interactions for RNA: ENST00000589577.1

VPS25-204, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 5

Gene VPS25, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-204ENST00000589577 DCDC5Q6ZRR9 648 aa4.94□□□□□ -1.62
VPS25-204ENST00000589577 VASH1Q7L8A9 365 aaPredicted RBP4.94□□□□□ -1.62
VPS25-204ENST00000589577 VMO1Q7Z5L0 202 aa4.94□□□□□ -1.62
VPS25-204ENST00000589577 LHFPL3Q86UP9 236 aa4.94□□□□□ -1.62
VPS25-204ENST00000589577 Q8N2B8 174 aa4.94□□□□□ -1.62
VPS25-204ENST00000589577 PNKDQ8N490 385 aa4.94□□□□□ -1.62
VPS25-204ENST00000589577 ZNF676Q8N7Q3 588 aa4.94□□□□□ -1.62
VPS25-204ENST00000589577 LINC00482Q8N8I6 264 aa4.94□□□□□ -1.62
VPS25-204ENST00000589577 C19orf18Q8NEA5 215 aa4.94□□□□□ -1.62
VPS25-204ENST00000589577 TSPAN14Q8NG11 270 aa4.94□□□□□ -1.62
VPS25-204ENST00000589577 OR52H1Q8NGJ2 320 aa4.94□□□□□ -1.62
VPS25-204ENST00000589577 OR52N1Q8NH53 320 aa4.94□□□□□ -1.62
VPS25-204ENST00000589577 AKR7LQ8NHP1 331 aa4.94□□□□□ -1.62
VPS25-204ENST00000589577 RNF133Q8WVZ7 376 aa4.94□□□□□ -1.62
VPS25-204ENST00000589577 C17orf50Q8WW18 174 aa4.94□□□□□ -1.62
VPS25-204ENST00000589577 GGHQ92820 318 aa4.94□□□□□ -1.62
VPS25-204ENST00000589577 NABP1Q96AH0 204 aa4.94□□□□□ -1.62
VPS25-204ENST00000589577 APOBEC3DQ96AK3 386 aaPredicted RBP4.94□□□□□ -1.62
VPS25-204ENST00000589577 PGAM5Q96HS1 289 aa4.94□□□□□ -1.62
VPS25-204ENST00000589577 C4orf36Q96KX1 117 aa4.94□□□□□ -1.62
VPS25-204ENST00000589577 OR8B4Q96RC9 309 aa4.94□□□□□ -1.62
VPS25-204ENST00000589577 KCNJ15Q99712 375 aa4.94□□□□□ -1.62
VPS25-204ENST00000589577 JAM3Q9BX67 310 aa4.94□□□□□ -1.62
VPS25-204ENST00000589577 CDCA4Q9BXL8 241 aa4.94□□□□□ -1.62
VPS25-204ENST00000589577 MRPS26Q9BYN8 205 aaKnown RBP4.94□□□□□ -1.62
VPS25-204ENST00000589577 OR10A2Q9H208 303 aa4.94□□□□□ -1.62
VPS25-204ENST00000589577 POFUT1Q9H488 388 aa4.94□□□□□ -1.62
VPS25-204ENST00000589577 OPA3Q9H6K4 179 aa4.94□□□□□ -1.62
VPS25-204ENST00000589577 PLEKHA1Q9HB21 404 aa4.94□□□□□ -1.62
VPS25-204ENST00000589577 NEK6Q9HC98 313 aa4.94□□□□□ -1.62
VPS25-204ENST00000589577 TUBG2Q9NRH3 451 aa4.94□□□□□ -1.62
VPS25-204ENST00000589577 MRPL22Q9NWU5 206 aaKnown RBP4.94□□□□□ -1.62
VPS25-204ENST00000589577 ERVK13-1Q9NX77 482 aa4.94□□□□□ -1.62
VPS25-204ENST00000589577 AASSQ9UDR5 926 aa4.94□□□□□ -1.62
VPS25-204ENST00000589577 ZNF391Q9UJN7 358 aa4.94□□□□□ -1.62
VPS25-204ENST00000589577 N6AMT1Q9Y5N5 214 aa4.94□□□□□ -1.62
VPS25-204ENST00000589577 LHFPL6Q9Y693 200 aa4.94□□□□□ -1.62
VPS25-204ENST00000589577 IGHV3-64DA0A0J9YX35 117 aa4.93□□□□□ -1.62
VPS25-204ENST00000589577 A0A1B0GVI7 797 aa4.93□□□□□ -1.62
VPS25-204ENST00000589577 TMEM269A0A1B0GVZ9 245 aa4.93□□□□□ -1.62
VPS25-204ENST00000589577 A0A1W2PRD5 423 aa4.93□□□□□ -1.62
VPS25-204ENST00000589577 A0A1W2PRF3 423 aa4.93□□□□□ -1.62
VPS25-204ENST00000589577 A0A1W2PRM7 423 aa4.93□□□□□ -1.62
VPS25-204ENST00000589577 ACOD1A6NK06 481 aa4.93□□□□□ -1.62
VPS25-204ENST00000589577 H3BSA7 217 aa4.93□□□□□ -1.62
VPS25-204ENST00000589577 NPFFO15130 113 aa4.93□□□□□ -1.62
VPS25-204ENST00000589577 TIMM8AO60220 97 aaPredicted RBP4.93□□□□□ -1.62
VPS25-204ENST00000589577 MTRF1O75570 445 aaKnown RBP4.93□□□□□ -1.62
VPS25-204ENST00000589577 SERPINA3P01011 423 aa4.93□□□□□ -1.62
VPS25-204ENST00000589577 PF4P02776 101 aa4.93□□□□□ -1.62
VPS25-204ENST00000589577 MT-ND2P03891 347 aa4.93□□□□□ -1.62
VPS25-204ENST00000589577 LCATP04180 440 aa4.93□□□□□ -1.62
VPS25-204ENST00000589577 CD2P06729 351 aa4.93□□□□□ -1.62
VPS25-204ENST00000589577 UBCP0CG48 685 aaKnown RBP4.93□□□□□ -1.62
VPS25-204ENST00000589577 PF4V1P10720 104 aa4.93□□□□□ -1.62
VPS25-204ENST00000589577 ATP6V1B1P15313 513 aa4.93□□□□□ -1.62
VPS25-204ENST00000589577 PSMB9P28065 219 aa4.93□□□□□ -1.62
VPS25-204ENST00000589577 SAA4P35542 130 aa4.93□□□□□ -1.62
VPS25-204ENST00000589577 RPS27P42677 84 aaKnown RBP4.93□□□□□ -1.62
VPS25-204ENST00000589577 CX3CR1P49238 355 aa4.93□□□□□ -1.62
VPS25-204ENST00000589577 PSMA6P60900 246 aaKnown RBP4.93□□□□□ -1.62
VPS25-204ENST00000589577 PSG4Q00888 419 aa4.93□□□□□ -1.62
VPS25-204ENST00000589577 CD83Q01151 205 aa4.93□□□□□ -1.62
VPS25-204ENST00000589577 BDH1Q02338 343 aa4.93□□□□□ -1.62
VPS25-204ENST00000589577 KMT2AQ03164 3969 aa4.93□□□□□ -1.62
VPS25-204ENST00000589577 ROM1Q03395 351 aa4.93□□□□□ -1.62
VPS25-204ENST00000589577 KLRD1Q13241 179 aa4.93□□□□□ -1.62
VPS25-204ENST00000589577 SPHARQ15513 63 aa4.93□□□□□ -1.62
VPS25-204ENST00000589577 HERC1Q15751 4861 aa4.93□□□□□ -1.62
VPS25-204ENST00000589577 TIMM50Q3ZCQ8 353 aa4.93□□□□□ -1.62
VPS25-204ENST00000589577 CCDC58Q4VC31 144 aa4.93□□□□□ -1.62
VPS25-204ENST00000589577 TP53I3Q53FA7 332 aa4.93□□□□□ -1.62
VPS25-204ENST00000589577 RNLSQ5VYX0 342 aa4.93□□□□□ -1.62
VPS25-204ENST00000589577 METAP1DQ6UB28 335 aaPredicted RBP4.93□□□□□ -1.62
VPS25-204ENST00000589577 ETV3LQ6ZN32 361 aa4.93□□□□□ -1.62
VPS25-204ENST00000589577 CFAP77Q6ZQR2 320 aa4.93□□□□□ -1.62
VPS25-204ENST00000589577 ZNF367Q7RTV3 350 aa4.93□□□□□ -1.62
VPS25-204ENST00000589577 MRPL21Q7Z2W9 205 aaKnown RBP4.93□□□□□ -1.62
VPS25-204ENST00000589577 CCDC54Q8NEL0 328 aa4.93□□□□□ -1.62
VPS25-204ENST00000589577 ABHD4Q8TB40 342 aa4.93□□□□□ -1.62
VPS25-204ENST00000589577 UFD1Q92890 307 aa4.93□□□□□ -1.62
VPS25-204ENST00000589577 ITFG2Q969R8 447 aa4.93□□□□□ -1.62
VPS25-204ENST00000589577 AJUBAQ96IF1 538 aa4.93□□□□□ -1.62
VPS25-204ENST00000589577 TECTBQ96PL2 329 aa4.93□□□□□ -1.62
VPS25-204ENST00000589577 CITED4Q96RK1 184 aa4.93□□□□□ -1.62
VPS25-204ENST00000589577 TTTY10Q9BZA0 68 aa4.93□□□□□ -1.62
VPS25-204ENST00000589577 WNT5BQ9H1J7 359 aa4.93□□□□□ -1.62
VPS25-204ENST00000589577 RGCCQ9H4X1 137 aa4.93□□□□□ -1.62
VPS25-204ENST00000589577 DUSP21Q9H596 190 aa4.93□□□□□ -1.62
VPS25-204ENST00000589577 BRD7Q9NPI1 651 aa4.93□□□□□ -1.62
VPS25-204ENST00000589577 NOP16Q9Y3C1 178 aaKnown RBP4.93□□□□□ -1.62
VPS25-204ENST00000589577 LRP12Q9Y561 859 aa4.93□□□□□ -1.62
VPS25-204ENST00000589577 TRBV2A0A0J9YWF9 115 aa4.92□□□□□ -1.62
VPS25-204ENST00000589577 TMEM212A6NML5 194 aa4.92□□□□□ -1.62
VPS25-204ENST00000589577 IFNL4K9M1U5 179 aa4.92□□□□□ -1.62
VPS25-204ENST00000589577 PSMD9O00233 223 aa4.92□□□□□ -1.62
VPS25-204ENST00000589577 SNRPBP14678 240 aaKnown RBP4.92□□□□□ -1.62
VPS25-204ENST00000589577 KITLGP21583 273 aa4.92□□□□□ -1.62
VPS25-204ENST00000589577 TNFSF4P23510 183 aa4.92□□□□□ -1.62
VPS25-204ENST00000589577 PSMA1P25786 263 aaKnown RBP4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms