RNA–Protein interactions for RNA: ENST00000589445.1

R3HDM4-205, Transcript of R3H domain containing 4, humanhuman

TSL 3

Gene R3HDM4, Length 705 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-205ENST00000589445 TMEM225BP0DP42 221 aa18.79■□□□□ 0.6
R3HDM4-205ENST00000589445 CFHR2P36980 270 aa18.79■□□□□ 0.6
R3HDM4-205ENST00000589445 TMEM249Q2WGJ8 235 aa18.79■□□□□ 0.6
R3HDM4-205ENST00000589445 SYT6Q5T7P8 510 aaPredicted RBP18.79■□□□□ 0.6
R3HDM4-205ENST00000589445 TMEM91Q6ZNR0 172 aa18.79■□□□□ 0.6
R3HDM4-205ENST00000589445 MKXQ8IYA7 352 aa18.79■□□□□ 0.6
R3HDM4-205ENST00000589445 PNLDC1Q8NA58 520 aaKnown RBP18.79■□□□□ 0.6
R3HDM4-205ENST00000589445 TNFAIP8L1Q8WVP5 186 aa18.79■□□□□ 0.6
R3HDM4-205ENST00000589445 TMUB1Q9BVT8 246 aa18.79■□□□□ 0.6
R3HDM4-205ENST00000589445 ELL3Q9HB65 397 aaPredicted RBP18.79■□□□□ 0.6
R3HDM4-205ENST00000589445 TMEM165Q9HC07 324 aa18.79■□□□□ 0.6
R3HDM4-205ENST00000589445 YLPM1P49750 1951 aaKnown RBP18.79■□□□□ 0.6
R3HDM4-205ENST00000589445 TRAPPC2LH3BP13 241 aa18.78■□□□□ 0.6
R3HDM4-205ENST00000589445 SC5DO75845 299 aa18.78■□□□□ 0.6
R3HDM4-205ENST00000589445 ARL6IP5O75915 188 aa18.78■□□□□ 0.6
R3HDM4-205ENST00000589445 UCHL1P09936 223 aa18.78■□□□□ 0.6
R3HDM4-205ENST00000589445 ZNF16P17020 682 aaPredicted RBP18.78■□□□□ 0.6
R3HDM4-205ENST00000589445 CALRP27797 417 aaKnown RBP18.78■□□□□ 0.6
R3HDM4-205ENST00000589445 ZNF93P35789 620 aaPredicted RBP18.78■□□□□ 0.6
R3HDM4-205ENST00000589445 OR3A4PP47883 348 aa18.78■□□□□ 0.6
R3HDM4-205ENST00000589445 PDZK1IP1Q13113 114 aa18.78■□□□□ 0.6
R3HDM4-205ENST00000589445 TEX36Q5VZQ5 186 aa18.78■□□□□ 0.6
R3HDM4-205ENST00000589445 UNQ9370/PRO34162Q6UXP9 181 aa18.78■□□□□ 0.6
R3HDM4-205ENST00000589445 DCDC5Q6ZRR9 648 aa18.78■□□□□ 0.6
R3HDM4-205ENST00000589445 NKAIN3Q8N8D7 197 aa18.78■□□□□ 0.6
R3HDM4-205ENST00000589445 OR5T2Q8NGG2 359 aa18.78■□□□□ 0.6
R3HDM4-205ENST00000589445 EMG1Q92979 244 aaKnown RBP18.78■□□□□ 0.6
R3HDM4-205ENST00000589445 NRIP2Q9BQI9 281 aa18.78■□□□□ 0.6
R3HDM4-205ENST00000589445 LPAR2Q9HBW0 351 aa18.78■□□□□ 0.6
R3HDM4-205ENST00000589445 NLKQ9UBE8 527 aa18.78■□□□□ 0.6
R3HDM4-205ENST00000589445 ADAM20O43506 726 aa18.77■□□□□ 0.6
R3HDM4-205ENST00000589445 TFF1P04155 84 aa18.77■□□□□ 0.6
R3HDM4-205ENST00000589445 MUC1P15941 1255 aaPredicted RBP18.77■□□□□ 0.6
R3HDM4-205ENST00000589445 BCL3P20749 454 aa18.77■□□□□ 0.6
R3HDM4-205ENST00000589445 SNU13P55769 128 aaKnown RBP18.77■□□□□ 0.6
R3HDM4-205ENST00000589445 ZP1P60852 638 aa18.77■□□□□ 0.6
R3HDM4-205ENST00000589445 NLRC3Q7RTR2 1065 aa18.77■□□□□ 0.6
R3HDM4-205ENST00000589445 OR51F2Q8NH61 342 aa18.77■□□□□ 0.6
R3HDM4-205ENST00000589445 MRPS26Q9BYN8 205 aaKnown RBP18.77■□□□□ 0.6
R3HDM4-205ENST00000589445 PPIL3Q9H2H8 161 aaKnown RBP18.77■□□□□ 0.6
R3HDM4-205ENST00000589445 RBFOX1Q9NWB1 397 aaKnown RBP18.77■□□□□ 0.6
R3HDM4-205ENST00000589445 MTCH1Q9NZJ7 389 aa18.77■□□□□ 0.6
R3HDM4-205ENST00000589445 STUB1Q9UNE7 303 aa18.77■□□□□ 0.6
R3HDM4-205ENST00000589445 GPX5O75715 221 aa18.76■□□□□ 0.59
R3HDM4-205ENST00000589445 ALDOBP05062 364 aa18.76■□□□□ 0.59
R3HDM4-205ENST00000589445 CALCBP10092 127 aa18.76■□□□□ 0.59
R3HDM4-205ENST00000589445 CD36P16671 472 aa18.76■□□□□ 0.59
R3HDM4-205ENST00000589445 LMO4P61968 165 aa18.76■□□□□ 0.59
R3HDM4-205ENST00000589445 STUMQ69YW2 141 aa18.76■□□□□ 0.59
R3HDM4-205ENST00000589445 C22orf42Q6IC83 251 aa18.76■□□□□ 0.59
R3HDM4-205ENST00000589445 LYPD2Q6UXB3 125 aa18.76■□□□□ 0.59
R3HDM4-205ENST00000589445 ACP7Q6ZNF0 438 aa18.76■□□□□ 0.59
R3HDM4-205ENST00000589445 OR8B3Q8NGG8 313 aa18.76■□□□□ 0.59
R3HDM4-205ENST00000589445 PHYHIPQ92561 330 aa18.76■□□□□ 0.59
R3HDM4-205ENST00000589445 OR8B2Q96RD0 313 aa18.76■□□□□ 0.59
R3HDM4-205ENST00000589445 PATZ1Q9HBE1 687 aaKnown RBP18.76■□□□□ 0.59
R3HDM4-205ENST00000589445 OR14J1Q9UGF5 321 aa18.76■□□□□ 0.59
R3HDM4-205ENST00000589445 TRIM64CA6NLI5 447 aa18.75■□□□□ 0.59
R3HDM4-205ENST00000589445 OR2AT4A6NND4 320 aa18.75■□□□□ 0.59
R3HDM4-205ENST00000589445 FAM157AC9JC47 383 aa18.75■□□□□ 0.59
R3HDM4-205ENST00000589445 TMPRSS2O15393 492 aa18.75■□□□□ 0.59
R3HDM4-205ENST00000589445 IGHV4-31P0DP07 118 aa18.75■□□□□ 0.59
R3HDM4-205ENST00000589445 PRKACAP17612 351 aa18.75■□□□□ 0.59
R3HDM4-205ENST00000589445 GADD45AP24522 165 aa18.75■□□□□ 0.59
R3HDM4-205ENST00000589445 MYL9P24844 172 aa18.75■□□□□ 0.59
R3HDM4-205ENST00000589445 GABRA2P47869 451 aa18.75■□□□□ 0.59
R3HDM4-205ENST00000589445 GZMKP49863 264 aa18.75■□□□□ 0.59
R3HDM4-205ENST00000589445 SEC61A1P61619 476 aaKnown RBP18.75■□□□□ 0.59
R3HDM4-205ENST00000589445 ESCO2Q56NI9 601 aa18.75■□□□□ 0.59
R3HDM4-205ENST00000589445 CRIP3Q6Q6R5 217 aa18.75■□□□□ 0.59
R3HDM4-205ENST00000589445 FIP1L1Q6UN15 594 aaKnown RBP18.75■□□□□ 0.59
R3HDM4-205ENST00000589445 Q8IYB0 196 aa18.75■□□□□ 0.59
R3HDM4-205ENST00000589445 C12orf43Q96C57 262 aaKnown RBP18.75■□□□□ 0.59
R3HDM4-205ENST00000589445 NEIL1Q96FI4 390 aaPredicted RBP18.75■□□□□ 0.59
R3HDM4-205ENST00000589445 SMR3AQ99954 134 aa18.75■□□□□ 0.59
R3HDM4-205ENST00000589445 CHCHD6Q9BRQ6 235 aa18.75■□□□□ 0.59
R3HDM4-205ENST00000589445 RASL12Q9NYN1 266 aa18.75■□□□□ 0.59
R3HDM4-205ENST00000589445 MIOXQ9UGB7 285 aa18.75■□□□□ 0.59
R3HDM4-205ENST00000589445 SSR3Q9UNL2 185 aa18.75■□□□□ 0.59
R3HDM4-205ENST00000589445 NIPBLQ6KC79 2804 aaeCLIP18.74■□□□□ 0.59
R3HDM4-205ENST00000589445 IGKV1-12A0A0C4DH73 117 aa18.74■□□□□ 0.59
R3HDM4-205ENST00000589445 LOC100506127A0A0U1RQW1 187 aa18.74■□□□□ 0.59
R3HDM4-205ENST00000589445 TRDV1A0A1B0GX56 115 aa18.74■□□□□ 0.59
R3HDM4-205ENST00000589445 F8VVB4 439 aa18.74■□□□□ 0.59
R3HDM4-205ENST00000589445 F8VWA3 439 aa18.74■□□□□ 0.59
R3HDM4-205ENST00000589445 NOS1APO75052 506 aaPredicted RBP18.74■□□□□ 0.59
R3HDM4-205ENST00000589445 FSTL3O95633 263 aa18.74■□□□□ 0.59
R3HDM4-205ENST00000589445 IGKV1D-12P01611 117 aa18.74■□□□□ 0.59
R3HDM4-205ENST00000589445 ADRA2CP18825 462 aa18.74■□□□□ 0.59
R3HDM4-205ENST00000589445 SRMP19623 302 aa18.74■□□□□ 0.59
R3HDM4-205ENST00000589445 NPBWR2P48146 333 aa18.74■□□□□ 0.59
R3HDM4-205ENST00000589445 PITPNBP48739 271 aa18.74■□□□□ 0.59
R3HDM4-205ENST00000589445 CEBPDP49716 269 aaPredicted RBP18.74■□□□□ 0.59
R3HDM4-205ENST00000589445 CD200R1LQ6Q8B3 271 aa18.74■□□□□ 0.59
R3HDM4-205ENST00000589445 LRRTM1Q86UE6 522 aa18.74■□□□□ 0.59
R3HDM4-205ENST00000589445 FAM216BQ8N7L0 139 aa18.74■□□□□ 0.59
R3HDM4-205ENST00000589445 S100A13Q99584 98 aa18.74■□□□□ 0.59
R3HDM4-205ENST00000589445 CCL13Q99616 98 aa18.74■□□□□ 0.59
R3HDM4-205ENST00000589445 OR51E2Q9H255 320 aa18.74■□□□□ 0.59
R3HDM4-205ENST00000589445 MRPS28Q9Y2Q9 187 aaKnown RBP18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms