RNA–Protein interactions for RNA: ENST00000588860.5

SMAD4-206, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-206ENST00000588860 STARD4Q96DR4 205 aa7.54□□□□□ -1.2
SMAD4-206ENST00000588860 WBP1Q96G27 269 aa7.54□□□□□ -1.2
SMAD4-206ENST00000588860 CCDC120Q96HB5 630 aa7.54□□□□□ -1.2
SMAD4-206ENST00000588860 CYYR1Q96J86 154 aa7.54□□□□□ -1.2
SMAD4-206ENST00000588860 Q96M66 194 aa7.54□□□□□ -1.2
SMAD4-206ENST00000588860 SLC6A7Q99884 636 aa7.54□□□□□ -1.2
SMAD4-206ENST00000588860 PECRQ9BY49 303 aa7.54□□□□□ -1.2
SMAD4-206ENST00000588860 GPN1Q9HCN4 374 aaPredicted RBP7.54□□□□□ -1.2
SMAD4-206ENST00000588860 PLSCR4Q9NRQ2 329 aa7.54□□□□□ -1.2
SMAD4-206ENST00000588860 SCP2D1Q9UJQ7 156 aa7.54□□□□□ -1.2
SMAD4-206ENST00000588860 ZNF222Q9UK12 451 aa7.54□□□□□ -1.2
SMAD4-206ENST00000588860 PLEKHA6Q9Y2H5 1048 aa7.54□□□□□ -1.2
SMAD4-206ENST00000588860 KCNK7Q9Y2U2 307 aa7.54□□□□□ -1.2
SMAD4-206ENST00000588860 IGKV1-12A0A0C4DH73 117 aa7.53□□□□□ -1.2
SMAD4-206ENST00000588860 ZNF732B4DXR9 585 aa7.53□□□□□ -1.2
SMAD4-206ENST00000588860 B8ZZF3 427 aa7.53□□□□□ -1.2
SMAD4-206ENST00000588860 SMPD2O60906 423 aa7.53□□□□□ -1.2
SMAD4-206ENST00000588860 ZNF780AO75290 641 aaPredicted RBP7.53□□□□□ -1.2
SMAD4-206ENST00000588860 CGAP01215 116 aa7.53□□□□□ -1.2
SMAD4-206ENST00000588860 IGKV1D-12P01611 117 aa7.53□□□□□ -1.2
SMAD4-206ENST00000588860 PMP2P02689 132 aa7.53□□□□□ -1.2
SMAD4-206ENST00000588860 HPXP02790 462 aa7.53□□□□□ -1.2
SMAD4-206ENST00000588860 IL5P05113 134 aa7.53□□□□□ -1.2
SMAD4-206ENST00000588860 CRHP06850 196 aa7.53□□□□□ -1.2
SMAD4-206ENST00000588860 ZNF735P0CB33 412 aa7.53□□□□□ -1.2
SMAD4-206ENST00000588860 SULT1A3P0DMM9 295 aa7.53□□□□□ -1.2
SMAD4-206ENST00000588860 SULT1A4P0DMN0 295 aa7.53□□□□□ -1.2
SMAD4-206ENST00000588860 VSIG10L2P0DP72 767 aa7.53□□□□□ -1.2
SMAD4-206ENST00000588860 CBR1P16152 277 aa7.53□□□□□ -1.2
SMAD4-206ENST00000588860 AMY2BP19961 511 aa7.53□□□□□ -1.2
SMAD4-206ENST00000588860 TBPP20226 339 aa7.53□□□□□ -1.2
SMAD4-206ENST00000588860 IL32P24001 234 aa7.53□□□□□ -1.2
SMAD4-206ENST00000588860 HRH1P35367 487 aa7.53□□□□□ -1.2
SMAD4-206ENST00000588860 GPM6AP51674 278 aa7.53□□□□□ -1.2
SMAD4-206ENST00000588860 TMPRSS3P57727 454 aa7.53□□□□□ -1.2
SMAD4-206ENST00000588860 PPP1CBP62140 327 aa7.53□□□□□ -1.2
SMAD4-206ENST00000588860 ARL6IP1Q15041 203 aa7.53□□□□□ -1.2
SMAD4-206ENST00000588860 CEACAM21Q3KPI0 293 aa7.53□□□□□ -1.2
SMAD4-206ENST00000588860 PIGYQ3MUY2 71 aa7.53□□□□□ -1.2
SMAD4-206ENST00000588860 ACTBL2Q562R1 376 aa7.53□□□□□ -1.2
SMAD4-206ENST00000588860 PCSK4Q6UW60 755 aa7.53□□□□□ -1.2
SMAD4-206ENST00000588860 GLDNQ6ZMI3 551 aaPredicted RBP7.53□□□□□ -1.2
SMAD4-206ENST00000588860 SLC25A26Q70HW3 274 aa7.53□□□□□ -1.2
SMAD4-206ENST00000588860 NOXA1Q86UR1 476 aa7.53□□□□□ -1.2
SMAD4-206ENST00000588860 OSR2Q8N2R0 312 aa7.53□□□□□ -1.2
SMAD4-206ENST00000588860 ZNF611Q8N823 705 aa7.53□□□□□ -1.2
SMAD4-206ENST00000588860 WDR31Q8NA23 367 aa7.53□□□□□ -1.2
SMAD4-206ENST00000588860 ZSCAN4Q8NAM6 433 aaPredicted RBP7.53□□□□□ -1.2
SMAD4-206ENST00000588860 ZBTB8BQ8NAP8 495 aaPredicted RBP7.53□□□□□ -1.2
SMAD4-206ENST00000588860 PXT1Q8NFP0 134 aa7.53□□□□□ -1.2
SMAD4-206ENST00000588860 OR11H7Q8NGC8 314 aa7.53□□□□□ -1.2
SMAD4-206ENST00000588860 OR51F2Q8NH61 342 aa7.53□□□□□ -1.2
SMAD4-206ENST00000588860 FAM57AQ8TBR7 257 aa7.53□□□□□ -1.2
SMAD4-206ENST00000588860 HPSE2Q8WWQ2 592 aa7.53□□□□□ -1.2
SMAD4-206ENST00000588860 ST8SIA4Q92187 359 aa7.53□□□□□ -1.2
SMAD4-206ENST00000588860 SLAMF9Q96A28 289 aa7.53□□□□□ -1.2
SMAD4-206ENST00000588860 HIST1H2AAQ96QV6 131 aa7.53□□□□□ -1.2
SMAD4-206ENST00000588860 OCSTAMPQ9BR26 566 aa7.53□□□□□ -1.2
SMAD4-206ENST00000588860 C1QTNF6Q9BXI9 259 aa7.53□□□□□ -1.2
SMAD4-206ENST00000588860 FGF23Q9GZV9 251 aaPredicted RBP7.53□□□□□ -1.2
SMAD4-206ENST00000588860 MOV10Q9HCE1 1003 aaKnown RBP7.53□□□□□ -1.2
SMAD4-206ENST00000588860 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP7.53□□□□□ -1.2
SMAD4-206ENST00000588860 ZNF71Q9NQZ8 489 aaPredicted RBP7.53□□□□□ -1.2
SMAD4-206ENST00000588860 PCDHB16Q9NRJ7 776 aa7.53□□□□□ -1.2
SMAD4-206ENST00000588860 PLEKHJ1Q9NW61 149 aa7.53□□□□□ -1.2
SMAD4-206ENST00000588860 IL36GQ9NZH8 169 aa7.53□□□□□ -1.2
SMAD4-206ENST00000588860 ZNF69Q9UC07 566 aa7.53□□□□□ -1.2
SMAD4-206ENST00000588860 ANAPC10Q9UM13 185 aa7.53□□□□□ -1.2
SMAD4-206ENST00000588860 FAM215AQ9Y5M1 114 aa7.53□□□□□ -1.2
SMAD4-206ENST00000588860 PTPRQQ9UMZ3 2332 aa7.53□□□□□ -1.2
SMAD4-206ENST00000588860 CHD3Q12873 2000 aaKnown RBP7.52□□□□□ -1.2
SMAD4-206ENST00000588860 COL12A1Q99715 3063 aa7.52□□□□□ -1.21
SMAD4-206ENST00000588860 UBR5O95071 2799 aaPredicted RBP7.52□□□□□ -1.21
SMAD4-206ENST00000588860 NOTCH2Q04721 2471 aa7.52□□□□□ -1.21
SMAD4-206ENST00000588860 TMEM82A0PJX8 343 aa7.52□□□□□ -1.21
SMAD4-206ENST00000588860 SERPINE3A8MV23 424 aa7.52□□□□□ -1.21
SMAD4-206ENST00000588860 SMLR1H3BR10 107 aa7.52□□□□□ -1.21
SMAD4-206ENST00000588860 J3QW42 95 aa7.52□□□□□ -1.21
SMAD4-206ENST00000588860 CREBL2O60519 120 aaPredicted RBP7.52□□□□□ -1.21
SMAD4-206ENST00000588860 TOXO94900 526 aa7.52□□□□□ -1.21
SMAD4-206ENST00000588860 IL2RAP01589 272 aa7.52□□□□□ -1.21
SMAD4-206ENST00000588860 IFNA6P05013 189 aa7.52□□□□□ -1.21
SMAD4-206ENST00000588860 ANXA3P12429 323 aa7.52□□□□□ -1.21
SMAD4-206ENST00000588860 NAT1P18440 290 aa7.52□□□□□ -1.21
SMAD4-206ENST00000588860 BCL3P20749 454 aa7.52□□□□□ -1.21
SMAD4-206ENST00000588860 MPZP25189 248 aa7.52□□□□□ -1.21
SMAD4-206ENST00000588860 MECP2P51608 486 aaKnown RBP7.52□□□□□ -1.21
SMAD4-206ENST00000588860 CXADRP78310 365 aa7.52□□□□□ -1.21
SMAD4-206ENST00000588860 MRPS15P82914 257 aaKnown RBP7.52□□□□□ -1.21
SMAD4-206ENST00000588860 P2RY6Q15077 328 aa7.52□□□□□ -1.21
SMAD4-206ENST00000588860 PPA1Q15181 289 aa7.52□□□□□ -1.21
SMAD4-206ENST00000588860 KCNJ8Q15842 424 aa7.52□□□□□ -1.21
SMAD4-206ENST00000588860 TAF9Q16594 264 aa7.52□□□□□ -1.21
SMAD4-206ENST00000588860 EIF2S3LQ2VIR3 472 aaKnown RBP7.52□□□□□ -1.21
SMAD4-206ENST00000588860 ZNF626Q68DY1 528 aa7.52□□□□□ -1.21
SMAD4-206ENST00000588860 OR2T2Q6IF00 324 aa7.52□□□□□ -1.21
SMAD4-206ENST00000588860 C3P1Q6ZMU1 363 aa7.52□□□□□ -1.21
SMAD4-206ENST00000588860 BEND4Q6ZU67 534 aa7.52□□□□□ -1.21
SMAD4-206ENST00000588860 SLC36A1Q7Z2H8 476 aa7.52□□□□□ -1.21
SMAD4-206ENST00000588860 C6orf201Q7Z4U5 140 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms