RNA–Protein interactions for RNA: ENST00000586119.1

LIG3-207, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-207ENST00000586119 LDLRAD2Q5SZI1 272 aa9.42□□□□□ -0.9
LIG3-207ENST00000586119 LCN1P1Q5VSP4 162 aa9.42□□□□□ -0.9
LIG3-207ENST00000586119 AADACL4Q5VUY2 407 aa9.42□□□□□ -0.9
LIG3-207ENST00000586119 NXNL2Q5VZ03 156 aa9.42□□□□□ -0.9
LIG3-207ENST00000586119 NCR3LG1Q68D85 454 aa9.42□□□□□ -0.9
LIG3-207ENST00000586119 TMEM200BQ69YZ2 307 aa9.42□□□□□ -0.9
LIG3-207ENST00000586119 Q6ZS46 218 aa9.42□□□□□ -0.9
LIG3-207ENST00000586119 MOB3CQ70IA8 216 aa9.42□□□□□ -0.9
LIG3-207ENST00000586119 HIST2H2ABQ8IUE6 130 aaPredicted RBP9.42□□□□□ -0.9
LIG3-207ENST00000586119 GID4Q8IVV7 300 aa9.42□□□□□ -0.9
LIG3-207ENST00000586119 TCEANCQ8N8B7 351 aa9.42□□□□□ -0.9
LIG3-207ENST00000586119 SETD9Q8NE22 299 aa9.42□□□□□ -0.9
LIG3-207ENST00000586119 BBS1Q8NFJ9 593 aa9.42□□□□□ -0.9
LIG3-207ENST00000586119 FAM81AQ8TBF8 368 aa9.42□□□□□ -0.9
LIG3-207ENST00000586119 ADI1Q9BV57 179 aa9.42□□□□□ -0.9
LIG3-207ENST00000586119 MMP28Q9H239 520 aa9.42□□□□□ -0.9
LIG3-207ENST00000586119 H2AFY2Q9P0M6 372 aaPredicted RBP9.42□□□□□ -0.9
LIG3-207ENST00000586119 HSPE1-MOB4S4R3N1 261 aa9.42□□□□□ -0.9
LIG3-207ENST00000586119 DSCAML1Q8TD84 2053 aa9.41□□□□□ -0.9
LIG3-207ENST00000586119 RFPL4AA6NLU0 287 aa9.41□□□□□ -0.9
LIG3-207ENST00000586119 ADARB2-AS1A8MUL3 147 aa9.41□□□□□ -0.9
LIG3-207ENST00000586119 PRR32B1ATL7 298 aa9.41□□□□□ -0.9
LIG3-207ENST00000586119 RFPL4AL1F8VTS6 287 aa9.41□□□□□ -0.9
LIG3-207ENST00000586119 SYNGR1O43759 233 aa9.41□□□□□ -0.9
LIG3-207ENST00000586119 ALX3O95076 343 aa9.41□□□□□ -0.9
LIG3-207ENST00000586119 APOC1P02654 83 aa9.41□□□□□ -0.9
LIG3-207ENST00000586119 LYNP07948 512 aa9.41□□□□□ -0.9
LIG3-207ENST00000586119 JUNBP17275 347 aaPredicted RBP9.41□□□□□ -0.9
LIG3-207ENST00000586119 SLC2A5P22732 501 aa9.41□□□□□ -0.9
LIG3-207ENST00000586119 CFL1P23528 166 aaKnown RBP9.41□□□□□ -0.9
LIG3-207ENST00000586119 CAPZA1P52907 286 aa9.41□□□□□ -0.9
LIG3-207ENST00000586119 BLMHQ13867 455 aa9.41□□□□□ -0.9
LIG3-207ENST00000586119 SNCBQ16143 134 aa9.41□□□□□ -0.9
LIG3-207ENST00000586119 ZBTB37Q5TC79 503 aa9.41□□□□□ -0.9
LIG3-207ENST00000586119 HAGHLQ6PII5 290 aaPredicted RBP9.41□□□□□ -0.9
LIG3-207ENST00000586119 MEPCEQ7L2J0 689 aaKnown RBP9.41□□□□□ -0.9
LIG3-207ENST00000586119 SHFQ7M4L6 423 aa9.41□□□□□ -0.9
LIG3-207ENST00000586119 ZDHHC23Q8IYP9 409 aa9.41□□□□□ -0.9
LIG3-207ENST00000586119 OR4C13Q8NGP0 309 aa9.41□□□□□ -0.9
LIG3-207ENST00000586119 OTOSQ8NHW6 89 aa9.41□□□□□ -0.9
LIG3-207ENST00000586119 MRAPQ8TCY5 172 aa9.41□□□□□ -0.9
LIG3-207ENST00000586119 CYGBQ8WWM9 190 aa9.41□□□□□ -0.9
LIG3-207ENST00000586119 TFAP2CQ92754 450 aa9.41□□□□□ -0.9
LIG3-207ENST00000586119 RFKQ969G6 155 aa9.41□□□□□ -0.9
LIG3-207ENST00000586119 Q96MT0 163 aa9.41□□□□□ -0.9
LIG3-207ENST00000586119 OR5M11Q96RB7 305 aa9.41□□□□□ -0.9
LIG3-207ENST00000586119 ZNF702PQ9H963 129 aa9.41□□□□□ -0.9
LIG3-207ENST00000586119 SERTAD4Q9NUC0 356 aa9.41□□□□□ -0.9
LIG3-207ENST00000586119 PIN1P1O15428 100 aa9.4□□□□□ -0.9
LIG3-207ENST00000586119 ZNF273Q14593 569 aa9.4□□□□□ -0.9
LIG3-207ENST00000586119 ZNF691Q5VV52 312 aa9.4□□□□□ -0.9
LIG3-207ENST00000586119 ZNF782Q6ZMW2 699 aaPredicted RBP9.4□□□□□ -0.9
LIG3-207ENST00000586119 ACP7Q6ZNF0 438 aa9.4□□□□□ -0.9
LIG3-207ENST00000586119 TMEM219Q86XT9 240 aa9.4□□□□□ -0.9
LIG3-207ENST00000586119 OR5D13Q8NGL4 314 aa9.4□□□□□ -0.9
LIG3-207ENST00000586119 OR2T6Q8NHC8 308 aa9.4□□□□□ -0.9
LIG3-207ENST00000586119 RHOXF1Q8NHV9 184 aa9.4□□□□□ -0.9
LIG3-207ENST00000586119 AQP3Q92482 292 aa9.4□□□□□ -0.9
LIG3-207ENST00000586119 SDSLQ96GA7 329 aa9.4□□□□□ -0.9
LIG3-207ENST00000586119 HIST1H2AAQ96QV6 131 aa9.4□□□□□ -0.9
LIG3-207ENST00000586119 IL4I1Q96RQ9 567 aa9.4□□□□□ -0.9
LIG3-207ENST00000586119 TEAD3Q99594 435 aa9.4□□□□□ -0.9
LIG3-207ENST00000586119 TTTY10Q9BZA0 68 aa9.4□□□□□ -0.9
LIG3-207ENST00000586119 FAM234AQ9H0X4 552 aa9.4□□□□□ -0.9
LIG3-207ENST00000586119 RGCCQ9H4X1 137 aa9.4□□□□□ -0.9
LIG3-207ENST00000586119 AURKAIP1Q9NWT8 199 aaPredicted RBP9.4□□□□□ -0.9
LIG3-207ENST00000586119 CLN6Q9NWW5 311 aa9.4□□□□□ -0.9
LIG3-207ENST00000586119 WARS2Q9UGM6 360 aaKnown RBP9.4□□□□□ -0.9
LIG3-207ENST00000586119 ZNF281Q9Y2X9 895 aa9.4□□□□□ -0.9
LIG3-207ENST00000586119 LRP12Q9Y561 859 aa9.4□□□□□ -0.9
LIG3-207ENST00000586119 A6NIN4 97 aa9.39□□□□□ -0.91
LIG3-207ENST00000586119 MAGEB4O15481 346 aaPredicted RBP9.39□□□□□ -0.91
LIG3-207ENST00000586119 MTRF1O75570 445 aaKnown RBP9.39□□□□□ -0.91
LIG3-207ENST00000586119 PIPP12273 146 aaPredicted RBP9.39□□□□□ -0.91
LIG3-207ENST00000586119 GABRB1P18505 474 aa9.39□□□□□ -0.91
LIG3-207ENST00000586119 ALOX5APP20292 161 aa9.39□□□□□ -0.91
LIG3-207ENST00000586119 HTR1FP30939 366 aa9.39□□□□□ -0.91
LIG3-207ENST00000586119 PRDX2P32119 198 aa9.39□□□□□ -0.91
LIG3-207ENST00000586119 AQP4P55087 323 aa9.39□□□□□ -0.91
LIG3-207ENST00000586119 RPS7P62081 194 aaKnown RBP9.39□□□□□ -0.91
LIG3-207ENST00000586119 RPL31P62899 125 aaKnown RBP9.39□□□□□ -0.91
LIG3-207ENST00000586119 GNG3P63215 75 aa9.39□□□□□ -0.91
LIG3-207ENST00000586119 APOFQ13790 326 aa9.39□□□□□ -0.91
LIG3-207ENST00000586119 CEACAM21Q3KPI0 293 aa9.39□□□□□ -0.91
LIG3-207ENST00000586119 IZUMO2Q6UXV1 221 aa9.39□□□□□ -0.91
LIG3-207ENST00000586119 THAP5Q7Z6K1 395 aa9.39□□□□□ -0.91
LIG3-207ENST00000586119 ENTHD1Q8IYW4 607 aa9.39□□□□□ -0.91
LIG3-207ENST00000586119 C8orf59Q8N0T1 100 aaPredicted RBP9.39□□□□□ -0.91
LIG3-207ENST00000586119 ZNF454Q8N9F8 522 aa9.39□□□□□ -0.91
LIG3-207ENST00000586119 OR2T27Q8NH04 317 aa9.39□□□□□ -0.91
LIG3-207ENST00000586119 ZNF671Q8TAW3 534 aa9.39□□□□□ -0.91
LIG3-207ENST00000586119 MNTQ99583 582 aa9.39□□□□□ -0.91
LIG3-207ENST00000586119 CITED2Q99967 270 aaPredicted RBP9.39□□□□□ -0.91
LIG3-207ENST00000586119 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP9.39□□□□□ -0.91
LIG3-207ENST00000586119 DNAH9Q9NYC9 4486 aa9.39□□□□□ -0.91
LIG3-207ENST00000586119 TRBV23-1A0A0A0MS06 115 aa9.38□□□□□ -0.91
LIG3-207ENST00000586119 CCDC182A6NF36 153 aa9.38□□□□□ -0.91
LIG3-207ENST00000586119 FAM90A8PA6NJQ4 464 aa9.38□□□□□ -0.91
LIG3-207ENST00000586119 FBXO24O75426 580 aa9.38□□□□□ -0.91
LIG3-207ENST00000586119 FAHP16930 419 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms