RNA–Protein interactions for RNA: ENST00000584991.5

CDK5RAP3-236, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,862 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-236ENST00000584991 CLCF1Q9UBD9 225 aa13.03□□□□□ -0.32
CDK5RAP3-236ENST00000584991 GPR160Q9UJ42 338 aa13.03□□□□□ -0.32
CDK5RAP3-236ENST00000584991 TUBD1Q9UJT1 453 aa13.03□□□□□ -0.32
CDK5RAP3-236ENST00000584991 MPTX1A8MV57 137 aa13.02□□□□□ -0.32
CDK5RAP3-236ENST00000584991 IGHV3-9P01782 118 aa13.02□□□□□ -0.32
CDK5RAP3-236ENST00000584991 CSN2P05814 226 aa13.02□□□□□ -0.32
CDK5RAP3-236ENST00000584991 FCGR2AP12318 317 aa13.02□□□□□ -0.32
CDK5RAP3-236ENST00000584991 ZNF84P51523 738 aa13.02□□□□□ -0.32
CDK5RAP3-236ENST00000584991 BTN1A1Q13410 526 aa13.02□□□□□ -0.32
CDK5RAP3-236ENST00000584991 ZNF273Q14593 569 aa13.02□□□□□ -0.32
CDK5RAP3-236ENST00000584991 PXDC1Q5TGL8 231 aa13.02□□□□□ -0.32
CDK5RAP3-236ENST00000584991 TSPO2Q5TGU0 170 aa13.02□□□□□ -0.32
CDK5RAP3-236ENST00000584991 FOXL2NBQ6ZUU3 175 aa13.02□□□□□ -0.32
CDK5RAP3-236ENST00000584991 PP6455Q8WZ26 134 aa13.02□□□□□ -0.32
CDK5RAP3-236ENST00000584991 CMBLQ96DG6 245 aa13.02□□□□□ -0.32
CDK5RAP3-236ENST00000584991 DMRTA2Q96SC8 542 aa13.02□□□□□ -0.32
CDK5RAP3-236ENST00000584991 TAS2R3Q9NYW6 316 aa13.02□□□□□ -0.32
CDK5RAP3-236ENST00000584991 ARHGAP21Q5T5U3 1957 aa13.02□□□□□ -0.33
CDK5RAP3-236ENST00000584991 MFNGO00587 321 aa13.02□□□□□ -0.33
CDK5RAP3-236ENST00000584991 FGF16O43320 207 aa13.02□□□□□ -0.33
CDK5RAP3-236ENST00000584991 TPT1P13693 172 aaKnown RBP13.02□□□□□ -0.33
CDK5RAP3-236ENST00000584991 VAMP1P23763 118 aa13.02□□□□□ -0.33
CDK5RAP3-236ENST00000584991 FPR2P25090 351 aa13.02□□□□□ -0.33
CDK5RAP3-236ENST00000584991 THBS4P35443 961 aa13.02□□□□□ -0.33
CDK5RAP3-236ENST00000584991 LUMP51884 338 aaPredicted RBP13.02□□□□□ -0.33
CDK5RAP3-236ENST00000584991 KRTCAP3Q53RY4 240 aa13.02□□□□□ -0.33
CDK5RAP3-236ENST00000584991 ZNF324BQ6AW86 544 aaPredicted RBP13.02□□□□□ -0.33
CDK5RAP3-236ENST00000584991 ZNF585AQ6P3V2 769 aa13.02□□□□□ -0.33
CDK5RAP3-236ENST00000584991 FAM122CQ6P4D5 195 aa13.02□□□□□ -0.33
CDK5RAP3-236ENST00000584991 C17orf107Q6ZR85 190 aa13.02□□□□□ -0.33
CDK5RAP3-236ENST00000584991 NUFIP2Q7Z417 695 aaKnown RBP13.02□□□□□ -0.33
CDK5RAP3-236ENST00000584991 GJC3Q8NFK1 279 aa13.02□□□□□ -0.33
CDK5RAP3-236ENST00000584991 OR5T2Q8NGG2 359 aa13.02□□□□□ -0.33
CDK5RAP3-236ENST00000584991 OR14K1Q8NGZ2 314 aa13.02□□□□□ -0.33
CDK5RAP3-236ENST00000584991 MARC2Q969Z3 335 aa13.02□□□□□ -0.33
CDK5RAP3-236ENST00000584991 SEC22AQ96IW7 307 aa13.02□□□□□ -0.33
CDK5RAP3-236ENST00000584991 ASH2LQ9UBL3 628 aa13.02□□□□□ -0.33
CDK5RAP3-236ENST00000584991 SERPINE3A8MV23 424 aa13.01□□□□□ -0.33
CDK5RAP3-236ENST00000584991 AHRRA9YTQ3 701 aa13.01□□□□□ -0.33
CDK5RAP3-236ENST00000584991 SFT2D2O95562 160 aa13.01□□□□□ -0.33
CDK5RAP3-236ENST00000584991 HCKP08631 526 aa13.01□□□□□ -0.33
CDK5RAP3-236ENST00000584991 NAT2P11245 290 aa13.01□□□□□ -0.33
CDK5RAP3-236ENST00000584991 ABOP16442 354 aa13.01□□□□□ -0.33
CDK5RAP3-236ENST00000584991 AKR1C4P17516 323 aa13.01□□□□□ -0.33
CDK5RAP3-236ENST00000584991 CTRB1P17538 263 aa13.01□□□□□ -0.33
CDK5RAP3-236ENST00000584991 MSR1P21757 451 aa13.01□□□□□ -0.33
CDK5RAP3-236ENST00000584991 MICBQ29980 383 aa13.01□□□□□ -0.33
CDK5RAP3-236ENST00000584991 CTRB2Q6GPI1 263 aa13.01□□□□□ -0.33
CDK5RAP3-236ENST00000584991 LHFPL1Q86WI0 220 aa13.01□□□□□ -0.33
CDK5RAP3-236ENST00000584991 SLC30A7Q8NEW0 376 aa13.01□□□□□ -0.33
CDK5RAP3-236ENST00000584991 NABP1Q96AH0 204 aa13.01□□□□□ -0.33
CDK5RAP3-236ENST00000584991 AIFM2Q9BRQ8 373 aa13.01□□□□□ -0.33
CDK5RAP3-236ENST00000584991 C1QTNF6Q9BXI9 259 aa13.01□□□□□ -0.33
CDK5RAP3-236ENST00000584991 WDR13Q9H1Z4 485 aa13.01□□□□□ -0.33
CDK5RAP3-236ENST00000584991 OR10A2Q9H208 303 aa13.01□□□□□ -0.33
CDK5RAP3-236ENST00000584991 NELFAQ9H3P2 528 aa13.01□□□□□ -0.33
CDK5RAP3-236ENST00000584991 GPR35Q9HC97 309 aa13.01□□□□□ -0.33
CDK5RAP3-236ENST00000584991 C12orf4Q9NQ89 552 aa13.01□□□□□ -0.33
CDK5RAP3-236ENST00000584991 ZC4H2Q9NQZ6 224 aa13.01□□□□□ -0.33
CDK5RAP3-236ENST00000584991 SLC7A10Q9NS82 523 aa13.01□□□□□ -0.33
CDK5RAP3-236ENST00000584991 PRRC2CQ9Y520 2896 aaKnown RBP13□□□□□ -0.33
CDK5RAP3-236ENST00000584991 FIGNL2A6NMB9 653 aa13□□□□□ -0.33
CDK5RAP3-236ENST00000584991 F5H0A9 414 aaPredicted RBP13□□□□□ -0.33
CDK5RAP3-236ENST00000584991 TRIM77I1YAP6 450 aa13□□□□□ -0.33
CDK5RAP3-236ENST00000584991 TSPAN4O14817 238 aa13□□□□□ -0.33
CDK5RAP3-236ENST00000584991 MPIG6BO95866 241 aa13□□□□□ -0.33
CDK5RAP3-236ENST00000584991 PMP2P02689 132 aa13□□□□□ -0.33
CDK5RAP3-236ENST00000584991 PET100P0DJ07 73 aa13□□□□□ -0.33
CDK5RAP3-236ENST00000584991 TMEM50BP56557 158 aa13□□□□□ -0.33
CDK5RAP3-236ENST00000584991 HIST1H3AP68431 136 aa13□□□□□ -0.33
CDK5RAP3-236ENST00000584991 CEACAM16Q2WEN9 425 aa13□□□□□ -0.33
CDK5RAP3-236ENST00000584991 ACSF3Q4G176 576 aaPredicted RBP13□□□□□ -0.33
CDK5RAP3-236ENST00000584991 PLAC9Q5JTB6 97 aa13□□□□□ -0.33
CDK5RAP3-236ENST00000584991 RIPPLY2Q5TAB7 128 aa13□□□□□ -0.33
CDK5RAP3-236ENST00000584991 HIST2H3PS2Q5TEC6 136 aa13□□□□□ -0.33
CDK5RAP3-236ENST00000584991 HIST2H3AQ71DI3 136 aa13□□□□□ -0.33
CDK5RAP3-236ENST00000584991 SLC16A14Q7RTX9 510 aa13□□□□□ -0.33
CDK5RAP3-236ENST00000584991 COMMD2Q86X83 199 aa13□□□□□ -0.33
CDK5RAP3-236ENST00000584991 ZNF283Q8N7M2 679 aa13□□□□□ -0.33
CDK5RAP3-236ENST00000584991 SREK1IP1Q8N9Q2 155 aaPredicted RBP13□□□□□ -0.33
CDK5RAP3-236ENST00000584991 ADAD2Q8NCV1 583 aaKnown RBP13□□□□□ -0.33
CDK5RAP3-236ENST00000584991 OR5AP2Q8NGF4 316 aa13□□□□□ -0.33
CDK5RAP3-236ENST00000584991 OR5H2Q8NGV7 314 aa13□□□□□ -0.33
CDK5RAP3-236ENST00000584991 CPT1CQ8TCG5 803 aa13□□□□□ -0.33
CDK5RAP3-236ENST00000584991 MARCH1Q8TCQ1 289 aa13□□□□□ -0.33
CDK5RAP3-236ENST00000584991 APH1AQ96BI3 265 aa13□□□□□ -0.33
CDK5RAP3-236ENST00000584991 PIK3IP1Q96FE7 263 aa13□□□□□ -0.33
CDK5RAP3-236ENST00000584991 ZNF416Q9BWM5 594 aa13□□□□□ -0.33
CDK5RAP3-236ENST00000584991 TM2D1Q9BX74 207 aa13□□□□□ -0.33
CDK5RAP3-236ENST00000584991 LINC00470Q9BZP3 86 aa13□□□□□ -0.33
CDK5RAP3-236ENST00000584991 PRORYQ9H606 182 aa13□□□□□ -0.33
CDK5RAP3-236ENST00000584991 C12orf49Q9H741 205 aa13□□□□□ -0.33
CDK5RAP3-236ENST00000584991 GP6Q9HCN6 339 aa13□□□□□ -0.33
CDK5RAP3-236ENST00000584991 TMEM100Q9NV29 134 aa13□□□□□ -0.33
CDK5RAP3-236ENST00000584991 DNAJB11Q9UBS4 358 aa13□□□□□ -0.33
CDK5RAP3-236ENST00000584991 CHD8Q9HCK8 2581 aa13□□□□□ -0.33
CDK5RAP3-236ENST00000584991 DOCK7Q96N67 2140 aa13□□□□□ -0.33
CDK5RAP3-236ENST00000584991 A0A0A6YYD4 124 aa12.99□□□□□ -0.33
CDK5RAP3-236ENST00000584991 C5orf51A6NDU8 294 aa12.99□□□□□ -0.33
CDK5RAP3-236ENST00000584991 TMEM8BA6NDV4 472 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms