RNA–Protein interactions for RNA: ENST00000584908.5

ERBB2-222, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best)

Gene ERBB2, Length 1,316 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-222ENST00000584908 USP43Q70EL4 1123 aa13.45□□□□□ -0.26
ERBB2-222ENST00000584908 BTN2A1Q7KYR7 527 aa13.45□□□□□ -0.26
ERBB2-222ENST00000584908 PNLDC1Q8NA58 520 aaKnown RBP13.45□□□□□ -0.26
ERBB2-222ENST00000584908 C8orf46Q8TAG6 207 aa13.45□□□□□ -0.26
ERBB2-222ENST00000584908 NPRL2Q8WTW4 380 aa13.45□□□□□ -0.26
ERBB2-222ENST00000584908 RGP1Q92546 391 aaPredicted RBP13.45□□□□□ -0.26
ERBB2-222ENST00000584908 ZNF488Q96MN9 340 aa13.45□□□□□ -0.26
ERBB2-222ENST00000584908 ANKRD60Q9BZ19 345 aa13.45□□□□□ -0.26
ERBB2-222ENST00000584908 RPUSD1Q9UJJ7 312 aaKnown RBP13.45□□□□□ -0.26
ERBB2-222ENST00000584908 NDUFB3O43676 98 aa13.44□□□□□ -0.26
ERBB2-222ENST00000584908 LALBAP00709 142 aa13.44□□□□□ -0.26
ERBB2-222ENST00000584908 MMP9P14780 707 aa13.44□□□□□ -0.26
ERBB2-222ENST00000584908 MYF6P23409 242 aa13.44□□□□□ -0.26
ERBB2-222ENST00000584908 ATP1B3P54709 279 aa13.44□□□□□ -0.26
ERBB2-222ENST00000584908 DGUOKQ16854 277 aa13.44□□□□□ -0.26
ERBB2-222ENST00000584908 LRRC10Q5BKY1 277 aa13.44□□□□□ -0.26
ERBB2-222ENST00000584908 ARMCX4Q5H9R4 360 aa13.44□□□□□ -0.26
ERBB2-222ENST00000584908 C6orf141Q5SZD1 244 aa13.44□□□□□ -0.26
ERBB2-222ENST00000584908 RNLSQ5VYX0 342 aa13.44□□□□□ -0.26
ERBB2-222ENST00000584908 LHFPL2Q6ZUX7 228 aa13.44□□□□□ -0.26
ERBB2-222ENST00000584908 FGFRL1Q8N441 504 aa13.44□□□□□ -0.26
ERBB2-222ENST00000584908 BPIFB6Q8NFQ5 453 aa13.44□□□□□ -0.26
ERBB2-222ENST00000584908 ST8SIA4Q92187 359 aa13.44□□□□□ -0.26
ERBB2-222ENST00000584908 SMIM19Q96E16 107 aa13.44□□□□□ -0.26
ERBB2-222ENST00000584908 OPALINQ96PE5 141 aa13.44□□□□□ -0.26
ERBB2-222ENST00000584908 ZCCHC4Q9H5U6 513 aa13.44□□□□□ -0.26
ERBB2-222ENST00000584908 CHCHD3Q9NX63 227 aaKnown RBP13.44□□□□□ -0.26
ERBB2-222ENST00000584908 MTCH1Q9NZJ7 389 aa13.44□□□□□ -0.26
ERBB2-222ENST00000584908 NUP50Q9UKX7 468 aa13.44□□□□□ -0.26
ERBB2-222ENST00000584908 MAB21L2Q9Y586 359 aa13.44□□□□□ -0.26
ERBB2-222ENST00000584908 SIRT4Q9Y6E7 314 aaPredicted RBP13.44□□□□□ -0.26
ERBB2-222ENST00000584908 ZNF879B4DU55 563 aa13.43□□□□□ -0.26
ERBB2-222ENST00000584908 TCF21O43680 179 aa13.43□□□□□ -0.26
ERBB2-222ENST00000584908 NXPH2O95156 264 aa13.43□□□□□ -0.26
ERBB2-222ENST00000584908 PLATP00750 562 aa13.43□□□□□ -0.26
ERBB2-222ENST00000584908 SELLP14151 372 aa13.43□□□□□ -0.26
ERBB2-222ENST00000584908 C21orf33P30042 268 aaPredicted RBP13.43□□□□□ -0.26
ERBB2-222ENST00000584908 HSPA13P48723 471 aa13.43□□□□□ -0.26
ERBB2-222ENST00000584908 DMKNQ6E0U4 476 aaPredicted RBP13.43□□□□□ -0.26
ERBB2-222ENST00000584908 ZNF529Q6P280 563 aa13.43□□□□□ -0.26
ERBB2-222ENST00000584908 CRIP3Q6Q6R5 217 aa13.43□□□□□ -0.26
ERBB2-222ENST00000584908 AHSA2Q719I0 299 aa13.43□□□□□ -0.26
ERBB2-222ENST00000584908 SERPINA12Q8IW75 414 aa13.43□□□□□ -0.26
ERBB2-222ENST00000584908 STX19Q8N4C7 294 aa13.43□□□□□ -0.26
ERBB2-222ENST00000584908 OR5D14Q8NGL3 314 aa13.43□□□□□ -0.26
ERBB2-222ENST00000584908 GPR148Q8TDV2 347 aa13.43□□□□□ -0.26
ERBB2-222ENST00000584908 GATAD2BQ8WXI9 593 aa13.43□□□□□ -0.26
ERBB2-222ENST00000584908 CEP19Q96LK0 163 aa13.43□□□□□ -0.26
ERBB2-222ENST00000584908 DCTN5Q9BTE1 182 aa13.43□□□□□ -0.26
ERBB2-222ENST00000584908 SEBOXQ9HB31 216 aaPredicted RBP13.43□□□□□ -0.26
ERBB2-222ENST00000584908 SLC25A10Q9UBX3 287 aaPredicted RBP13.43□□□□□ -0.26
ERBB2-222ENST00000584908 DHDHQ9UQ10 334 aa13.43□□□□□ -0.26
ERBB2-222ENST00000584908 RFPL4AA6NLU0 287 aa13.42□□□□□ -0.26
ERBB2-222ENST00000584908 RFPL4AL1F8VTS6 287 aa13.42□□□□□ -0.26
ERBB2-222ENST00000584908 SLC1A7O00341 560 aa13.42□□□□□ -0.26
ERBB2-222ENST00000584908 ATP6V1G2O95670 118 aa13.42□□□□□ -0.26
ERBB2-222ENST00000584908 KNG1P01042 644 aa13.42□□□□□ -0.26
ERBB2-222ENST00000584908 TFF1P04155 84 aa13.42□□□□□ -0.26
ERBB2-222ENST00000584908 MTCP1P56278 107 aa13.42□□□□□ -0.26
ERBB2-222ENST00000584908 FGF12P61328 243 aa13.42□□□□□ -0.26
ERBB2-222ENST00000584908 IKZF1Q13422 519 aa13.42□□□□□ -0.26
ERBB2-222ENST00000584908 C9orf139Q6ZV77 190 aa13.42□□□□□ -0.26
ERBB2-222ENST00000584908 SLC25A26Q70HW3 274 aa13.42□□□□□ -0.26
ERBB2-222ENST00000584908 MKXQ8IYA7 352 aa13.42□□□□□ -0.26
ERBB2-222ENST00000584908 Q8IYB0 196 aa13.42□□□□□ -0.26
ERBB2-222ENST00000584908 ZNF561Q8N587 486 aa13.42□□□□□ -0.26
ERBB2-222ENST00000584908 CD177Q8N6Q3 437 aa13.42□□□□□ -0.26
ERBB2-222ENST00000584908 OR13C9Q8NGT0 318 aa13.42□□□□□ -0.26
ERBB2-222ENST00000584908 MDFIQ99750 246 aa13.42□□□□□ -0.26
ERBB2-222ENST00000584908 SIRPDQ9H106 197 aa13.42□□□□□ -0.26
ERBB2-222ENST00000584908 ZNF281Q9Y2X9 895 aa13.42□□□□□ -0.26
ERBB2-222ENST00000584908 STAB1Q9NY15 2570 aa13.42□□□□□ -0.26
ERBB2-222ENST00000584908 DSCAML1Q8TD84 2053 aa13.42□□□□□ -0.26
ERBB2-222ENST00000584908 F8VVB4 439 aa13.41□□□□□ -0.26
ERBB2-222ENST00000584908 F8VWA3 439 aa13.41□□□□□ -0.26
ERBB2-222ENST00000584908 SULT1B1O43704 296 aa13.41□□□□□ -0.26
ERBB2-222ENST00000584908 CD1AP06126 327 aa13.41□□□□□ -0.26
ERBB2-222ENST00000584908 CDK1P06493 297 aa13.41□□□□□ -0.26
ERBB2-222ENST00000584908 PRDX2P32119 198 aa13.41□□□□□ -0.26
ERBB2-222ENST00000584908 GABRA2P47869 451 aa13.41□□□□□ -0.26
ERBB2-222ENST00000584908 WNT4P56705 351 aa13.41□□□□□ -0.26
ERBB2-222ENST00000584908 TAS2R43P59537 309 aa13.41□□□□□ -0.26
ERBB2-222ENST00000584908 PDZK1IP1Q13113 114 aa13.41□□□□□ -0.26
ERBB2-222ENST00000584908 ASPHD2Q6ICH7 369 aa13.41□□□□□ -0.26
ERBB2-222ENST00000584908 IZUMO2Q6UXV1 221 aa13.41□□□□□ -0.26
ERBB2-222ENST00000584908 KIR3DL3Q8N743 410 aa13.41□□□□□ -0.26
ERBB2-222ENST00000584908 NANOGP1Q8N7R0 232 aa13.41□□□□□ -0.26
ERBB2-222ENST00000584908 ZNRF1Q8ND25 227 aa13.41□□□□□ -0.26
ERBB2-222ENST00000584908 ZNF418Q8TF45 676 aaPredicted RBP13.41□□□□□ -0.26
ERBB2-222ENST00000584908 TSEN15Q8WW01 171 aaKnown RBP13.41□□□□□ -0.26
ERBB2-222ENST00000584908 PGLYRP3Q96LB9 341 aa13.41□□□□□ -0.26
ERBB2-222ENST00000584908 WDFY2Q96P53 400 aa13.41□□□□□ -0.26
ERBB2-222ENST00000584908 CDCA4Q9BXL8 241 aa13.41□□□□□ -0.26
ERBB2-222ENST00000584908 CNTD2Q9H8S5 307 aa13.41□□□□□ -0.26
ERBB2-222ENST00000584908 NEK6Q9HC98 313 aa13.41□□□□□ -0.26
ERBB2-222ENST00000584908 KPTNQ9Y664 436 aa13.41□□□□□ -0.26
ERBB2-222ENST00000584908 TRBV5-5A0A0J9YX44 114 aa13.4□□□□□ -0.26
ERBB2-222ENST00000584908 CD2P06729 351 aa13.4□□□□□ -0.26
ERBB2-222ENST00000584908 IGHV4-38-2P0DP08 117 aa13.4□□□□□ -0.26
ERBB2-222ENST00000584908 FPR2P25090 351 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms