RNA–Protein interactions for RNA: ENST00000584897.5

SMCHD1-211, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 4,143 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-211ENST00000584897 OR1I1O60431 355 aa1.58□□□□□ -2.16
SMCHD1-211ENST00000584897 FKBP6O75344 327 aa1.58□□□□□ -2.16
SMCHD1-211ENST00000584897 UBL3O95164 117 aa1.58□□□□□ -2.16
SMCHD1-211ENST00000584897 AIFM1O95831 613 aa1.58□□□□□ -2.16
SMCHD1-211ENST00000584897 PDYNP01213 254 aa1.58□□□□□ -2.16
SMCHD1-211ENST00000584897 HMGN1P05114 100 aa1.58□□□□□ -2.16
SMCHD1-211ENST00000584897 COX6B1P14854 86 aa1.58□□□□□ -2.16
SMCHD1-211ENST00000584897 NCBP2P52298 156 aaKnown RBP eCLIP1.58□□□□□ -2.16
SMCHD1-211ENST00000584897 POLR2JP52435 117 aaKnown RBP1.58□□□□□ -2.16
SMCHD1-211ENST00000584897 EFNB2P52799 333 aa1.58□□□□□ -2.16
SMCHD1-211ENST00000584897 GFERP55789 205 aa1.58□□□□□ -2.16
SMCHD1-211ENST00000584897 CTBP2P56545 445 aa1.58□□□□□ -2.16
SMCHD1-211ENST00000584897 ERVK-25P63136 954 aa1.58□□□□□ -2.16
SMCHD1-211ENST00000584897 OR4D1Q15615 310 aa1.58□□□□□ -2.16
SMCHD1-211ENST00000584897 DEFB109BQ30KR1 87 aa1.58□□□□□ -2.16
SMCHD1-211ENST00000584897 C6orf226Q5I0X4 101 aa1.58□□□□□ -2.16
SMCHD1-211ENST00000584897 FAHD2BQ6P2I3 314 aaPredicted RBP1.58□□□□□ -2.16
SMCHD1-211ENST00000584897 PRSS48Q7RTY5 328 aa1.58□□□□□ -2.16
SMCHD1-211ENST00000584897 ZNF100Q8IYN0 542 aa1.58□□□□□ -2.16
SMCHD1-211ENST00000584897 PGAM4Q8N0Y7 254 aa1.58□□□□□ -2.16
SMCHD1-211ENST00000584897 BPIFB2Q8N4F0 458 aa1.58□□□□□ -2.16
SMCHD1-211ENST00000584897 RBMXL3Q8N7X1 1067 aaKnown RBP1.58□□□□□ -2.16
SMCHD1-211ENST00000584897 OR5L1Q8NGL2 311 aa1.58□□□□□ -2.16
SMCHD1-211ENST00000584897 LILRB4Q8NHJ6 448 aa1.58□□□□□ -2.16
SMCHD1-211ENST00000584897 MARC2Q969Z3 335 aa1.58□□□□□ -2.16
SMCHD1-211ENST00000584897 ANKRD9Q96BM1 317 aaPredicted RBP1.58□□□□□ -2.16
SMCHD1-211ENST00000584897 PELI1Q96FA3 418 aa1.58□□□□□ -2.16
SMCHD1-211ENST00000584897 FAHD2AQ96GK7 314 aa1.58□□□□□ -2.16
SMCHD1-211ENST00000584897 NODALQ96S42 347 aa1.58□□□□□ -2.16
SMCHD1-211ENST00000584897 GAL3ST1Q99999 423 aa1.58□□□□□ -2.16
SMCHD1-211ENST00000584897 ABCD2Q9UBJ2 740 aa1.58□□□□□ -2.16
SMCHD1-211ENST00000584897 ZMAT5Q9UDW3 170 aaKnown RBP1.58□□□□□ -2.16
SMCHD1-211ENST00000584897 PSMD13Q9UNM6 376 aa1.58□□□□□ -2.16
SMCHD1-211ENST00000584897 NTNG1Q9Y2I2 539 aa1.58□□□□□ -2.16
SMCHD1-211ENST00000584897 AK6Q9Y3D8 172 aaKnown RBP1.58□□□□□ -2.16
SMCHD1-211ENST00000584897 RPL36Q9Y3U8 105 aaKnown RBP1.58□□□□□ -2.16
SMCHD1-211ENST00000584897 TMEM14AQ9Y6G1 99 aa1.58□□□□□ -2.16
SMCHD1-211ENST00000584897 SMAD5-AS1Q9Y6J3 95 aa1.58□□□□□ -2.16
SMCHD1-211ENST00000584897 EP300Q09472 2414 aaPredicted RBP1.58□□□□□ -2.16
SMCHD1-211ENST00000584897 TRAV36DV7A0A075B6V5 113 aa1.58□□□□□ -2.16
SMCHD1-211ENST00000584897 MEIOCA2RUB1 952 aa1.58□□□□□ -2.16
SMCHD1-211ENST00000584897 CLDN24A6NM45 220 aa1.58□□□□□ -2.16
SMCHD1-211ENST00000584897 C15orf61A6NNL5 157 aa1.58□□□□□ -2.16
SMCHD1-211ENST00000584897 ZNF879B4DU55 563 aa1.58□□□□□ -2.16
SMCHD1-211ENST00000584897 G3V3Y1 287 aa1.58□□□□□ -2.16
SMCHD1-211ENST00000584897 ZNF701M0R085 212 aaPredicted RBP1.58□□□□□ -2.16
SMCHD1-211ENST00000584897 P2RY10O00398 339 aa1.58□□□□□ -2.16
SMCHD1-211ENST00000584897 RDH16O75452 317 aa1.58□□□□□ -2.16
SMCHD1-211ENST00000584897 SNAP29O95721 258 aa1.58□□□□□ -2.16
SMCHD1-211ENST00000584897 TFPTP0C1Z6 253 aa1.58□□□□□ -2.16
SMCHD1-211ENST00000584897 PSMB1P20618 241 aaKnown RBP1.58□□□□□ -2.16
SMCHD1-211ENST00000584897 CRABP1P29762 137 aa1.58□□□□□ -2.16
SMCHD1-211ENST00000584897 LEPP41159 167 aa1.58□□□□□ -2.16
SMCHD1-211ENST00000584897 P2RY1P47900 373 aa1.58□□□□□ -2.16
SMCHD1-211ENST00000584897 PDLIM4P50479 330 aa1.58□□□□□ -2.16
SMCHD1-211ENST00000584897 B3GALT5-AS1P59052 145 aa1.58□□□□□ -2.16
SMCHD1-211ENST00000584897 NAAAQ02083 359 aa1.58□□□□□ -2.16
SMCHD1-211ENST00000584897 CD47Q08722 323 aa1.58□□□□□ -2.16
SMCHD1-211ENST00000584897 TRAM2Q15035 370 aa1.58□□□□□ -2.16
SMCHD1-211ENST00000584897 TRIP13Q15645 432 aaPredicted RBP1.58□□□□□ -2.16
SMCHD1-211ENST00000584897 IGFBP7Q16270 282 aa1.58□□□□□ -2.16
SMCHD1-211ENST00000584897 PCK2Q16822 640 aa1.58□□□□□ -2.16
SMCHD1-211ENST00000584897 ZNF876PQ49A33 203 aa1.58□□□□□ -2.16
SMCHD1-211ENST00000584897 ZBED5Q49AG3 693 aa1.58□□□□□ -2.16
SMCHD1-211ENST00000584897 C22orf42Q6IC83 251 aa1.58□□□□□ -2.16
SMCHD1-211ENST00000584897 TTC33Q6PID6 262 aaPredicted RBP1.58□□□□□ -2.16
SMCHD1-211ENST00000584897 SLC25A47Q6Q0C1 308 aa1.58□□□□□ -2.16
SMCHD1-211ENST00000584897 DEGS2Q6QHC5 323 aa1.58□□□□□ -2.16
SMCHD1-211ENST00000584897 GDPD3Q7L5L3 318 aa1.58□□□□□ -2.16
SMCHD1-211ENST00000584897 PELI3Q8N2H9 469 aa1.58□□□□□ -2.16
SMCHD1-211ENST00000584897 CCNYL1Q8N7R7 359 aa1.58□□□□□ -2.16
SMCHD1-211ENST00000584897 ZNF485Q8NCK3 441 aa1.58□□□□□ -2.16
SMCHD1-211ENST00000584897 SDR9C7Q8NEX9 313 aa1.58□□□□□ -2.16
SMCHD1-211ENST00000584897 OR9A4Q8NGU2 314 aa1.58□□□□□ -2.16
SMCHD1-211ENST00000584897 OR2V1Q8NHB1 315 aa1.58□□□□□ -2.16
SMCHD1-211ENST00000584897 TSEN15Q8WW01 171 aaKnown RBP1.58□□□□□ -2.16
SMCHD1-211ENST00000584897 ADIPOR1Q96A54 375 aa1.58□□□□□ -2.16
SMCHD1-211ENST00000584897 CNRIP1Q96F85 164 aaPredicted RBP1.58□□□□□ -2.16
SMCHD1-211ENST00000584897 Q96MT0 163 aa1.58□□□□□ -2.16
SMCHD1-211ENST00000584897 OR5B12Q96R08 314 aa1.58□□□□□ -2.16
SMCHD1-211ENST00000584897 YTHDF1Q9BYJ9 559 aaKnown RBP1.58□□□□□ -2.16
SMCHD1-211ENST00000584897 TCEAL2Q9H3H9 227 aaPredicted RBP1.58□□□□□ -2.16
SMCHD1-211ENST00000584897 NARFLQ9H6Q4 476 aa1.58□□□□□ -2.16
SMCHD1-211ENST00000584897 GEMIN7Q9H840 131 aaKnown RBP1.58□□□□□ -2.16
SMCHD1-211ENST00000584897 KLHDC2Q9Y2U9 406 aa1.58□□□□□ -2.16
SMCHD1-211ENST00000584897 ORC6Q9Y5N6 252 aa1.58□□□□□ -2.16
SMCHD1-211ENST00000584897 PEX16Q9Y5Y5 336 aa1.58□□□□□ -2.16
SMCHD1-211ENST00000584897 LOC400499M0QZD8 3231 aa1.58□□□□□ -2.16
SMCHD1-211ENST00000584897 SPENQ96T58 3664 aaKnown RBP1.58□□□□□ -2.16
SMCHD1-211ENST00000584897 A0A1B0GUS0 222 aa1.58□□□□□ -2.16
SMCHD1-211ENST00000584897 A0A1W2PR80 420 aa1.58□□□□□ -2.16
SMCHD1-211ENST00000584897 CIB4A0PJX0 185 aa1.58□□□□□ -2.16
SMCHD1-211ENST00000584897 TRAPPC13A5PLN9 417 aa1.58□□□□□ -2.16
SMCHD1-211ENST00000584897 ARGFXA6NJG6 315 aa1.58□□□□□ -2.16
SMCHD1-211ENST00000584897 NPIPB9F8W1W9 429 aa1.58□□□□□ -2.16
SMCHD1-211ENST00000584897 AKR7A2O43488 359 aa1.58□□□□□ -2.16
SMCHD1-211ENST00000584897 NDUFA2O43678 99 aa1.58□□□□□ -2.16
SMCHD1-211ENST00000584897 CHP2O43745 196 aa1.58□□□□□ -2.16
SMCHD1-211ENST00000584897 ENSAO43768 121 aaKnown RBP1.58□□□□□ -2.16
SMCHD1-211ENST00000584897 FADS1O60427 444 aa1.58□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms