RNA–Protein interactions for RNA: ENST00000584186.1

CDK5RAP3-233, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 3

Gene CDK5RAP3, Length 482 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-233	ENST00000584186	LOC107986453	A0A1B0GWG9	222 aa		11.15	□□□□□ -0.62
CDK5RAP3-233	ENST00000584186	DAPL1	A0PJW8	107 aa		11.15	□□□□□ -0.62
CDK5RAP3-233	ENST00000584186	ANGPTL7	O43827	346 aa		11.15	□□□□□ -0.62
CDK5RAP3-233	ENST00000584186	NOS1AP	O75052	506 aa	Predicted RBP	11.15	□□□□□ -0.62
CDK5RAP3-233	ENST00000584186	GATB	O75879	557 aa	Known RBP	11.15	□□□□□ -0.62
CDK5RAP3-233	ENST00000584186	SERPINA3	P01011	423 aa		11.15	□□□□□ -0.62
CDK5RAP3-233	ENST00000584186	KIR3DL2	P43630	455 aa		11.15	□□□□□ -0.62
CDK5RAP3-233	ENST00000584186	UBE2E1	P51965	193 aa		11.15	□□□□□ -0.62
CDK5RAP3-233	ENST00000584186	ACTC1	P68032	377 aa		11.15	□□□□□ -0.62
CDK5RAP3-233	ENST00000584186	ACTA1	P68133	377 aa		11.15	□□□□□ -0.62
CDK5RAP3-233	ENST00000584186	SRSF4	Q08170	494 aa	Known RBP	11.15	□□□□□ -0.62
CDK5RAP3-233	ENST00000584186		Q6ZSR3	168 aa		11.15	□□□□□ -0.62
CDK5RAP3-233	ENST00000584186	OR5D13	Q8NGL4	314 aa		11.15	□□□□□ -0.62
CDK5RAP3-233	ENST00000584186	SLAMF9	Q96A28	289 aa		11.15	□□□□□ -0.62
CDK5RAP3-233	ENST00000584186	HRASLS5	Q96KN8	279 aa		11.15	□□□□□ -0.62
CDK5RAP3-233	ENST00000584186	PKIB	Q9C010	78 aa		11.15	□□□□□ -0.62
CDK5RAP3-233	ENST00000584186	USE1	Q9NZ43	259 aa		11.15	□□□□□ -0.62
CDK5RAP3-233	ENST00000584186	AASS	Q9UDR5	926 aa		11.15	□□□□□ -0.62
CDK5RAP3-233	ENST00000584186	MMP24	Q9Y5R2	645 aa		11.15	□□□□□ -0.62
CDK5RAP3-233	ENST00000584186		A0A1B0GUS0	222 aa		11.14	□□□□□ -0.63
CDK5RAP3-233	ENST00000584186		A0A1W2PPH5	198 aa		11.14	□□□□□ -0.63
CDK5RAP3-233	ENST00000584186	NDUFA7	O95182	113 aa		11.14	□□□□□ -0.63
CDK5RAP3-233	ENST00000584186	UBC	P0CG48	685 aa	Known RBP	11.14	□□□□□ -0.63
CDK5RAP3-233	ENST00000584186	PIP	P12273	146 aa	Predicted RBP	11.14	□□□□□ -0.63
CDK5RAP3-233	ENST00000584186	MPZ	P25189	248 aa		11.14	□□□□□ -0.63
CDK5RAP3-233	ENST00000584186	FUT6	P51993	359 aa		11.14	□□□□□ -0.63
CDK5RAP3-233	ENST00000584186	SNRPG	P62308	76 aa	Known RBP	11.14	□□□□□ -0.63
CDK5RAP3-233	ENST00000584186	IL24	Q13007	206 aa		11.14	□□□□□ -0.63
CDK5RAP3-233	ENST00000584186	TAF9	Q16594	264 aa		11.14	□□□□□ -0.63
CDK5RAP3-233	ENST00000584186	PRR31	Q5SQ13	230 aa		11.14	□□□□□ -0.63
CDK5RAP3-233	ENST00000584186	MEDAG	Q5VYS4	303 aa		11.14	□□□□□ -0.63
CDK5RAP3-233	ENST00000584186	OLFML2A	Q68BL7	652 aa		11.14	□□□□□ -0.63
CDK5RAP3-233	ENST00000584186	TMEM200B	Q69YZ2	307 aa		11.14	□□□□□ -0.63
CDK5RAP3-233	ENST00000584186	GDPGP1	Q6ZNW5	385 aa		11.14	□□□□□ -0.63
CDK5RAP3-233	ENST00000584186	SLC25A26	Q70HW3	274 aa		11.14	□□□□□ -0.63
CDK5RAP3-233	ENST00000584186	MKX	Q8IYA7	352 aa		11.14	□□□□□ -0.63
CDK5RAP3-233	ENST00000584186	ASCC1	Q8N9N2	400 aa	Known RBP	11.14	□□□□□ -0.63
CDK5RAP3-233	ENST00000584186	CCDC54	Q8NEL0	328 aa		11.14	□□□□□ -0.63
CDK5RAP3-233	ENST00000584186	BORCS8	Q96FH0	119 aa		11.14	□□□□□ -0.63
CDK5RAP3-233	ENST00000584186	CHST5	Q9GZS9	411 aa		11.14	□□□□□ -0.63
CDK5RAP3-233	ENST00000584186	SLITRK2	Q9H156	845 aa		11.14	□□□□□ -0.63
CDK5RAP3-233	ENST00000584186	ZNF696	Q9H7X3	374 aa		11.14	□□□□□ -0.63
CDK5RAP3-233	ENST00000584186	HES4	Q9HCC6	221 aa		11.14	□□□□□ -0.63
CDK5RAP3-233	ENST00000584186	ZNRD1	Q9P1U0	126 aa		11.14	□□□□□ -0.63
CDK5RAP3-233	ENST00000584186	SF3B6	Q9Y3B4	125 aa	Known RBP	11.14	□□□□□ -0.63
CDK5RAP3-233	ENST00000584186	GMPPB	Q9Y5P6	360 aa		11.14	□□□□□ -0.63
CDK5RAP3-233	ENST00000584186	IGKV1-27	A0A075B6S5	117 aa		11.13	□□□□□ -0.63
CDK5RAP3-233	ENST00000584186	MEX3A	A1L020	520 aa	Known RBP	11.13	□□□□□ -0.63
CDK5RAP3-233	ENST00000584186	CLPSL1	A2RUU4	121 aa		11.13	□□□□□ -0.63
CDK5RAP3-233	ENST00000584186	SNTN	A6NMZ2	147 aa		11.13	□□□□□ -0.63
CDK5RAP3-233	ENST00000584186		F8VVB4	439 aa		11.13	□□□□□ -0.63
CDK5RAP3-233	ENST00000584186		F8VWA3	439 aa		11.13	□□□□□ -0.63
CDK5RAP3-233	ENST00000584186		J3QLW9	94 aa		11.13	□□□□□ -0.63
CDK5RAP3-233	ENST00000584186	SLC16A6	O15403	523 aa		11.13	□□□□□ -0.63
CDK5RAP3-233	ENST00000584186	TK1	P04183	234 aa		11.13	□□□□□ -0.63
CDK5RAP3-233	ENST00000584186	OCM2	P0CE71	109 aa		11.13	□□□□□ -0.63
CDK5RAP3-233	ENST00000584186	OCM	P0CE72	109 aa	Predicted RBP	11.13	□□□□□ -0.63
CDK5RAP3-233	ENST00000584186	CCL3L1	P16619	93 aa		11.13	□□□□□ -0.63
CDK5RAP3-233	ENST00000584186	ZNF19	P17023	458 aa		11.13	□□□□□ -0.63
CDK5RAP3-233	ENST00000584186	ZNF20	P17024	532 aa		11.13	□□□□□ -0.63
CDK5RAP3-233	ENST00000584186	COX7A1	P24310	79 aa		11.13	□□□□□ -0.63
CDK5RAP3-233	ENST00000584186	OR12D2	P58182	307 aa		11.13	□□□□□ -0.63
CDK5RAP3-233	ENST00000584186	ERVFRD-1	P60508	538 aa		11.13	□□□□□ -0.63
CDK5RAP3-233	ENST00000584186	RPL15	P61313	204 aa	Known RBP	11.13	□□□□□ -0.63
CDK5RAP3-233	ENST00000584186	ISL1	P61371	349 aa		11.13	□□□□□ -0.63
CDK5RAP3-233	ENST00000584186	COL10A1	Q03692	680 aa		11.13	□□□□□ -0.63
CDK5RAP3-233	ENST00000584186	ACSM1	Q08AH1	577 aa		11.13	□□□□□ -0.63
CDK5RAP3-233	ENST00000584186	CNN3	Q15417	329 aa	Known RBP	11.13	□□□□□ -0.63
CDK5RAP3-233	ENST00000584186	OCLN	Q16625	522 aa		11.13	□□□□□ -0.63
CDK5RAP3-233	ENST00000584186	DHRS7B	Q6IAN0	325 aa	Predicted RBP	11.13	□□□□□ -0.63
CDK5RAP3-233	ENST00000584186	BRICD5	Q6PL45	260 aa		11.13	□□□□□ -0.63
CDK5RAP3-233	ENST00000584186	EGFL6	Q8IUX8	553 aa		11.13	□□□□□ -0.63
CDK5RAP3-233	ENST00000584186	C10orf67	Q8IYJ2	551 aa		11.13	□□□□□ -0.63
CDK5RAP3-233	ENST00000584186	OR2G2	Q8NGZ5	317 aa		11.13	□□□□□ -0.63
CDK5RAP3-233	ENST00000584186	C17orf50	Q8WW18	174 aa		11.13	□□□□□ -0.63
CDK5RAP3-233	ENST00000584186	WFDC12	Q8WWY7	111 aa		11.13	□□□□□ -0.63
CDK5RAP3-233	ENST00000584186	ADAT3	Q96EY9	351 aa	Predicted RBP	11.13	□□□□□ -0.63
CDK5RAP3-233	ENST00000584186	CEP19	Q96LK0	163 aa		11.13	□□□□□ -0.63
CDK5RAP3-233	ENST00000584186	MBOAT4	Q96T53	435 aa		11.13	□□□□□ -0.63
CDK5RAP3-233	ENST00000584186	MTCH1	Q9NZJ7	389 aa		11.13	□□□□□ -0.63
CDK5RAP3-233	ENST00000584186	FRRS1L	Q9P0K9	344 aa		11.13	□□□□□ -0.63
CDK5RAP3-233	ENST00000584186	VPREB3	Q9UKI3	123 aa		11.13	□□□□□ -0.63
CDK5RAP3-233	ENST00000584186	RNF114	Q9Y508	228 aa		11.13	□□□□□ -0.63
CDK5RAP3-233	ENST00000584186	hCG_1809904	A0A1W2PP81	198 aa		11.12	□□□□□ -0.63
CDK5RAP3-233	ENST00000584186		A0A1W2PPE2	198 aa		11.12	□□□□□ -0.63
CDK5RAP3-233	ENST00000584186		A0A1W2PR64	198 aa		11.12	□□□□□ -0.63
CDK5RAP3-233	ENST00000584186		A0A1W2PRV1	198 aa		11.12	□□□□□ -0.63
CDK5RAP3-233	ENST00000584186		J3QRE1	110 aa		11.12	□□□□□ -0.63
CDK5RAP3-233	ENST00000584186	HTR1A	P08908	422 aa		11.12	□□□□□ -0.63
CDK5RAP3-233	ENST00000584186	CALCB	P10092	127 aa		11.12	□□□□□ -0.63
CDK5RAP3-233	ENST00000584186	EDDM3B	P56851	147 aa		11.12	□□□□□ -0.63
CDK5RAP3-233	ENST00000584186	NANOS3	P60323	173 aa	Known RBP	11.12	□□□□□ -0.63
CDK5RAP3-233	ENST00000584186	ERVK11-1	P61568	191 aa		11.12	□□□□□ -0.63
CDK5RAP3-233	ENST00000584186	ZNF273	Q14593	569 aa		11.12	□□□□□ -0.63
CDK5RAP3-233	ENST00000584186	SLC25A30	Q5SVS4	291 aa		11.12	□□□□□ -0.63
CDK5RAP3-233	ENST00000584186	TMEM244	Q5VVB8	128 aa		11.12	□□□□□ -0.63
CDK5RAP3-233	ENST00000584186	HCP5	Q6MZN7	132 aa		11.12	□□□□□ -0.63
CDK5RAP3-233	ENST00000584186	KCTD20	Q7Z5Y7	419 aa		11.12	□□□□□ -0.63
CDK5RAP3-233	ENST00000584186	ACBD7	Q8N6N7	88 aa		11.12	□□□□□ -0.63
CDK5RAP3-233	ENST00000584186	PP6455	Q8WZ26	134 aa		11.12	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms