RNA–Protein interactions for RNA: ENST00000583708.5

UBBP4-201, Transcript of ubiquitin B pseudogene 4, humanhuman

BASIC

Gene UBBP4, Length 689 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP4-201ENST00000583708 FAM90A12PA8MX19 464 aa7.82□□□□□ -1.16
UBBP4-201ENST00000583708 FAM90A5PA8MXJ8 464 aa7.82□□□□□ -1.16
UBBP4-201ENST00000583708 FAM90A23PA8MXZ1 464 aa7.82□□□□□ -1.16
UBBP4-201ENST00000583708 H3BSH0 61 aa7.82□□□□□ -1.16
UBBP4-201ENST00000583708 SLC17A2O00624 439 aa7.82□□□□□ -1.16
UBBP4-201ENST00000583708 AKR7A2O43488 359 aa7.82□□□□□ -1.16
UBBP4-201ENST00000583708 NXPH2O95156 264 aa7.82□□□□□ -1.16
UBBP4-201ENST00000583708 ECDO95905 644 aaPredicted RBP7.82□□□□□ -1.16
UBBP4-201ENST00000583708 FAM90A15PP0C7V4 464 aa7.82□□□□□ -1.16
UBBP4-201ENST00000583708 FAM90A13PP0C7W8 464 aa7.82□□□□□ -1.16
UBBP4-201ENST00000583708 FAM90A14PP0C7W9 464 aa7.82□□□□□ -1.16
UBBP4-201ENST00000583708 FAM90A24PP0C7X0 464 aa7.82□□□□□ -1.16
UBBP4-201ENST00000583708 TMEM225BP0DP42 221 aa7.82□□□□□ -1.16
UBBP4-201ENST00000583708 RAB3BP20337 219 aa7.82□□□□□ -1.16
UBBP4-201ENST00000583708 TMBIM6P55061 237 aa7.82□□□□□ -1.16
UBBP4-201ENST00000583708 ZP1P60852 638 aa7.82□□□□□ -1.16
UBBP4-201ENST00000583708 DYNC1I2Q13409 638 aaKnown RBP7.82□□□□□ -1.16
UBBP4-201ENST00000583708 CARTPTQ16568 116 aa7.82□□□□□ -1.16
UBBP4-201ENST00000583708 ZNF404Q494X3 552 aa7.82□□□□□ -1.16
UBBP4-201ENST00000583708 SLC25A26Q70HW3 274 aa7.82□□□□□ -1.16
UBBP4-201ENST00000583708 SATL1Q86VE3 508 aa7.82□□□□□ -1.16
UBBP4-201ENST00000583708 ANGPTL5Q86XS5 388 aa7.82□□□□□ -1.16
UBBP4-201ENST00000583708 CALHM1Q8IU99 346 aa7.82□□□□□ -1.16
UBBP4-201ENST00000583708 TGIF2LYQ8IUE0 185 aa7.82□□□□□ -1.16
UBBP4-201ENST00000583708 JAGN1Q8N5M9 183 aa7.82□□□□□ -1.16
UBBP4-201ENST00000583708 CHST4Q8NCG5 386 aa7.82□□□□□ -1.16
UBBP4-201ENST00000583708 OR52N4Q8NGI2 321 aa7.82□□□□□ -1.16
UBBP4-201ENST00000583708 OR51T1Q8NGJ9 327 aa7.82□□□□□ -1.16
UBBP4-201ENST00000583708 PPP1R35Q8TAP8 253 aa7.82□□□□□ -1.16
UBBP4-201ENST00000583708 ZNF420Q8TAQ5 688 aaPredicted RBP7.82□□□□□ -1.16
UBBP4-201ENST00000583708 TRMT10AQ8TBZ6 339 aaKnown RBP7.82□□□□□ -1.16
UBBP4-201ENST00000583708 TNFAIP8L1Q8WVP5 186 aa7.82□□□□□ -1.16
UBBP4-201ENST00000583708 CST11Q9H112 138 aa7.82□□□□□ -1.16
UBBP4-201ENST00000583708 PPP1R3EQ9H7J1 279 aa7.82□□□□□ -1.16
UBBP4-201ENST00000583708 PATZ1Q9HBE1 687 aaKnown RBP7.82□□□□□ -1.16
UBBP4-201ENST00000583708 SMURF1Q9HCE7 757 aa7.82□□□□□ -1.16
UBBP4-201ENST00000583708 EXOSC4Q9NPD3 245 aaKnown RBP7.82□□□□□ -1.16
UBBP4-201ENST00000583708 MTCH1Q9NZJ7 389 aa7.82□□□□□ -1.16
UBBP4-201ENST00000583708 DNAJB11Q9UBS4 358 aa7.82□□□□□ -1.16
UBBP4-201ENST00000583708 FBLN5Q9UBX5 448 aa7.82□□□□□ -1.16
UBBP4-201ENST00000583708 PRRC2AP48634 2157 aaKnown RBP7.81□□□□□ -1.16
UBBP4-201ENST00000583708 IGHV4-30-2A0A087WSY4 118 aa7.81□□□□□ -1.16
UBBP4-201ENST00000583708 PPIAL4CA0A0B4J2A2 164 aa7.81□□□□□ -1.16
UBBP4-201ENST00000583708 A0A1W2PPK0 400 aa7.81□□□□□ -1.16
UBBP4-201ENST00000583708 NOTOA8MTQ0 251 aa7.81□□□□□ -1.16
UBBP4-201ENST00000583708 LYNX1G3V0Z9 82 aa7.81□□□□□ -1.16
UBBP4-201ENST00000583708 ZNF701M0R085 212 aaPredicted RBP7.81□□□□□ -1.16
UBBP4-201ENST00000583708 SH2D1BO14796 132 aa7.81□□□□□ -1.16
UBBP4-201ENST00000583708 TNFRSF13BO14836 293 aaPredicted RBP7.81□□□□□ -1.16
UBBP4-201ENST00000583708 SLC22A1O15245 554 aa7.81□□□□□ -1.16
UBBP4-201ENST00000583708 FOXH1O75593 365 aa7.81□□□□□ -1.16
UBBP4-201ENST00000583708 LY6HO94772 140 aa7.81□□□□□ -1.16
UBBP4-201ENST00000583708 CYB5R3P00387 301 aaPredicted RBP7.81□□□□□ -1.16
UBBP4-201ENST00000583708 IL1AP01583 271 aa7.81□□□□□ -1.16
UBBP4-201ENST00000583708 CSTBP04080 98 aaKnown RBP7.81□□□□□ -1.16
UBBP4-201ENST00000583708 MAS1P04201 325 aa7.81□□□□□ -1.16
UBBP4-201ENST00000583708 GLAP06280 429 aa7.81□□□□□ -1.16
UBBP4-201ENST00000583708 CHRM2P08172 466 aa7.81□□□□□ -1.16
UBBP4-201ENST00000583708 LYNX1P0DP58 116 aa7.81□□□□□ -1.16
UBBP4-201ENST00000583708 GTF2F2P13984 249 aa7.81□□□□□ -1.16
UBBP4-201ENST00000583708 GADD45AP24522 165 aa7.81□□□□□ -1.16
UBBP4-201ENST00000583708 HTR2CP28335 458 aa7.81□□□□□ -1.16
UBBP4-201ENST00000583708 GZMKP49863 264 aa7.81□□□□□ -1.16
UBBP4-201ENST00000583708 FGF12P61328 243 aa7.81□□□□□ -1.16
UBBP4-201ENST00000583708 IL13RA2Q14627 380 aa7.81□□□□□ -1.16
UBBP4-201ENST00000583708 ZNF146Q15072 292 aa7.81□□□□□ -1.16
UBBP4-201ENST00000583708 ZMYND11Q15326 602 aa7.81□□□□□ -1.16
UBBP4-201ENST00000583708 RSU1Q15404 277 aa7.81□□□□□ -1.16
UBBP4-201ENST00000583708 SPRNQ5BIV9 151 aa7.81□□□□□ -1.16
UBBP4-201ENST00000583708 CD276Q5ZPR3 534 aa7.81□□□□□ -1.16
UBBP4-201ENST00000583708 C22orf42Q6IC83 251 aa7.81□□□□□ -1.16
UBBP4-201ENST00000583708 FAM166AQ6J272 317 aa7.81□□□□□ -1.16
UBBP4-201ENST00000583708 ACP7Q6ZNF0 438 aa7.81□□□□□ -1.16
UBBP4-201ENST00000583708 ZNF826PQ6ZT77 177 aa7.81□□□□□ -1.16
UBBP4-201ENST00000583708 OR2W3Q7Z3T1 314 aa7.81□□□□□ -1.16
UBBP4-201ENST00000583708 KRTAP1-3Q8IUG1 177 aa7.81□□□□□ -1.16
UBBP4-201ENST00000583708 FAM58AQ8N1B3 248 aa7.81□□□□□ -1.16
UBBP4-201ENST00000583708 OR5D13Q8NGL4 314 aa7.81□□□□□ -1.16
UBBP4-201ENST00000583708 KCNG3Q8TAE7 436 aa7.81□□□□□ -1.16
UBBP4-201ENST00000583708 RAB2BQ8WUD1 216 aa7.81□□□□□ -1.16
UBBP4-201ENST00000583708 DVL3Q92997 716 aaPredicted RBP7.81□□□□□ -1.16
UBBP4-201ENST00000583708 PTX4Q96A99 478 aa7.81□□□□□ -1.16
UBBP4-201ENST00000583708 NEIL1Q96FI4 390 aaPredicted RBP7.81□□□□□ -1.16
UBBP4-201ENST00000583708 SDSLQ96GA7 329 aa7.81□□□□□ -1.16
UBBP4-201ENST00000583708 Q96MF0 132 aa7.81□□□□□ -1.16
UBBP4-201ENST00000583708 GAL3ST1Q99999 423 aa7.81□□□□□ -1.16
UBBP4-201ENST00000583708 CHCHD6Q9BRQ6 235 aa7.81□□□□□ -1.16
UBBP4-201ENST00000583708 FUNDC2Q9BWH2 189 aa7.81□□□□□ -1.16
UBBP4-201ENST00000583708 BPESC1Q9GZL8 116 aa7.81□□□□□ -1.16
UBBP4-201ENST00000583708 FAM234AQ9H0X4 552 aa7.81□□□□□ -1.16
UBBP4-201ENST00000583708 OR51E2Q9H255 320 aa7.81□□□□□ -1.16
UBBP4-201ENST00000583708 PPIL3Q9H2H8 161 aaKnown RBP7.81□□□□□ -1.16
UBBP4-201ENST00000583708 ZNF665Q9H7R5 613 aa7.81□□□□□ -1.16
UBBP4-201ENST00000583708 IFT22Q9H7X7 185 aa7.81□□□□□ -1.16
UBBP4-201ENST00000583708 SPACA1Q9HBV2 294 aa7.81□□□□□ -1.16
UBBP4-201ENST00000583708 HMG20AQ9NP66 347 aa7.81□□□□□ -1.16
UBBP4-201ENST00000583708 NLKQ9UBE8 527 aa7.81□□□□□ -1.16
UBBP4-201ENST00000583708 PCDHB10Q9UN67 800 aa7.81□□□□□ -1.16
UBBP4-201ENST00000583708 MRPS28Q9Y2Q9 187 aaKnown RBP7.81□□□□□ -1.16
UBBP4-201ENST00000583708 POLR3KQ9Y2Y1 108 aaPredicted RBP7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms