RNA–Protein interactions for RNA: ENST00000582448.5

SS18-221, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 585 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-221ENST00000582448 SSX4O60224 188 aa8.75□□□□□ -1.01
SS18-221ENST00000582448 TPPPO94811 219 aa8.75□□□□□ -1.01
SS18-221ENST00000582448 HLA-HP01893 362 aa8.75□□□□□ -1.01
SS18-221ENST00000582448 SERPINA5P05154 406 aa8.75□□□□□ -1.01
SS18-221ENST00000582448 HCKP08631 526 aa8.75□□□□□ -1.01
SS18-221ENST00000582448 PATE4P0C8F1 98 aa8.75□□□□□ -1.01
SS18-221ENST00000582448 TNFRSF1AP19438 455 aa8.75□□□□□ -1.01
SS18-221ENST00000582448 CCNOP22674 350 aa8.75□□□□□ -1.01
SS18-221ENST00000582448 MRPS10P82664 201 aaKnown RBP8.75□□□□□ -1.01
SS18-221ENST00000582448 RIPPLY1Q0D2K3 151 aa8.75□□□□□ -1.01
SS18-221ENST00000582448 P2RY14Q15391 338 aa8.75□□□□□ -1.01
SS18-221ENST00000582448 CNN3Q15417 329 aaKnown RBP8.75□□□□□ -1.01
SS18-221ENST00000582448 KRTAP24-1Q3LI83 254 aa8.75□□□□□ -1.01
SS18-221ENST00000582448 TMEM69Q5SWH9 247 aa8.75□□□□□ -1.01
SS18-221ENST00000582448 GLYATL3Q5SZD4 288 aa8.75□□□□□ -1.01
SS18-221ENST00000582448 HACD4Q5VWC8 232 aa8.75□□□□□ -1.01
SS18-221ENST00000582448 MZT2BQ6NZ67 158 aa8.75□□□□□ -1.01
SS18-221ENST00000582448 TFAP2EQ6VUC0 442 aa8.75□□□□□ -1.01
SS18-221ENST00000582448 Q6ZT83 130 aa8.75□□□□□ -1.01
SS18-221ENST00000582448 BCL6BQ8N143 479 aaPredicted RBP8.75□□□□□ -1.01
SS18-221ENST00000582448 CENPSQ8N2Z9 138 aa8.75□□□□□ -1.01
SS18-221ENST00000582448 FTMTQ8N4E7 242 aa8.75□□□□□ -1.01
SS18-221ENST00000582448 SYNPRQ8TBG9 265 aa8.75□□□□□ -1.01
SS18-221ENST00000582448 CFHR4Q92496 578 aa8.75□□□□□ -1.01
SS18-221ENST00000582448 SLC7A6Q92536 515 aa8.75□□□□□ -1.01
SS18-221ENST00000582448 FAM3DQ96BQ1 224 aa8.75□□□□□ -1.01
SS18-221ENST00000582448 S100PBPQ96BU1 408 aa8.75□□□□□ -1.01
SS18-221ENST00000582448 REEP6Q96HR9 211 aa8.75□□□□□ -1.01
SS18-221ENST00000582448 GPER1Q99527 375 aa8.75□□□□□ -1.01
SS18-221ENST00000582448 S100A13Q99584 98 aa8.75□□□□□ -1.01
SS18-221ENST00000582448 GFI1Q99684 422 aa8.75□□□□□ -1.01
SS18-221ENST00000582448 TMEM204Q9BSN7 226 aa8.75□□□□□ -1.01
SS18-221ENST00000582448 BEX2Q9BXY8 128 aa8.75□□□□□ -1.01
SS18-221ENST00000582448 ABCG5Q9H222 651 aa8.75□□□□□ -1.01
SS18-221ENST00000582448 OPA3Q9H6K4 179 aa8.75□□□□□ -1.01
SS18-221ENST00000582448 METTL17Q9H7H0 456 aaPredicted RBP8.75□□□□□ -1.01
SS18-221ENST00000582448 PPP1R3EQ9H7J1 279 aa8.75□□□□□ -1.01
SS18-221ENST00000582448 RHBDL2Q9NX52 303 aa8.75□□□□□ -1.01
SS18-221ENST00000582448 OR5V1Q9UGF6 321 aa8.75□□□□□ -1.01
SS18-221ENST00000582448 PIGLQ9Y2B2 252 aa8.75□□□□□ -1.01
SS18-221ENST00000582448 MRPS7Q9Y2R9 242 aaKnown RBP8.75□□□□□ -1.01
SS18-221ENST00000582448 RNF115Q9Y4L5 304 aa8.75□□□□□ -1.01
SS18-221ENST00000582448 V9GYS6 101 aa8.75□□□□□ -1.01
SS18-221ENST00000582448 ABCA1O95477 2261 aa8.74□□□□□ -1.01
SS18-221ENST00000582448 RAI1Q7Z5J4 1906 aaPredicted RBP8.74□□□□□ -1.01
SS18-221ENST00000582448 A0A0G2JMP0 313 aa8.74□□□□□ -1.01
SS18-221ENST00000582448 A0A0X1KG70 313 aa8.74□□□□□ -1.01
SS18-221ENST00000582448 C5orf49A4QMS7 147 aa8.74□□□□□ -1.01
SS18-221ENST00000582448 METTL21EPA6NDL7 271 aa8.74□□□□□ -1.01
SS18-221ENST00000582448 CENPXA8MT69 81 aa8.74□□□□□ -1.01
SS18-221ENST00000582448 SCGNO76038 276 aa8.74□□□□□ -1.01
SS18-221ENST00000582448 IGHV4-39P01824 125 aa8.74□□□□□ -1.01
SS18-221ENST00000582448 FAM157CP0CG43 387 aa8.74□□□□□ -1.01
SS18-221ENST00000582448 UBBP0CG47 229 aa8.74□□□□□ -1.01
SS18-221ENST00000582448 STOMP27105 288 aa8.74□□□□□ -1.01
SS18-221ENST00000582448 ZNF93P35789 620 aaPredicted RBP8.74□□□□□ -1.01
SS18-221ENST00000582448 CLDN12P56749 244 aa8.74□□□□□ -1.01
SS18-221ENST00000582448 P2RY6Q15077 328 aa8.74□□□□□ -1.01
SS18-221ENST00000582448 GUSBP1Q15486 140 aa8.74□□□□□ -1.01
SS18-221ENST00000582448 ZNF79Q15937 498 aa8.74□□□□□ -1.01
SS18-221ENST00000582448 C21orf62-AS1Q17RA5 79 aa8.74□□□□□ -1.01
SS18-221ENST00000582448 TBC1D28Q2M2D7 210 aa8.74□□□□□ -1.01
SS18-221ENST00000582448 TBRG1Q3YBR2 411 aa8.74□□□□□ -1.01
SS18-221ENST00000582448 HIKESHIQ53FT3 197 aa8.74□□□□□ -1.01
SS18-221ENST00000582448 C1orf100Q5SVJ3 147 aa8.74□□□□□ -1.01
SS18-221ENST00000582448 ZNF57Q68EA5 555 aaPredicted RBP8.74□□□□□ -1.01
SS18-221ENST00000582448 UNQ6126/PRO20091Q6UXV3 157 aa8.74□□□□□ -1.01
SS18-221ENST00000582448 DCDC5Q6ZRR9 648 aa8.74□□□□□ -1.01
SS18-221ENST00000582448 UTS2BQ765I0 119 aa8.74□□□□□ -1.01
SS18-221ENST00000582448 PRSS45Q7RTY3 260 aa8.74□□□□□ -1.01
SS18-221ENST00000582448 SNX29P2Q8IUI4 249 aa8.74□□□□□ -1.01
SS18-221ENST00000582448 C1orf162Q8NEQ5 155 aaPredicted RBP8.74□□□□□ -1.01
SS18-221ENST00000582448 OR4M2Q8NGB6 313 aa8.74□□□□□ -1.01
SS18-221ENST00000582448 OR51D1Q8NGF3 324 aa8.74□□□□□ -1.01
SS18-221ENST00000582448 OR5L1Q8NGL2 311 aa8.74□□□□□ -1.01
SS18-221ENST00000582448 OR5H6Q8NGV6 325 aa8.74□□□□□ -1.01
SS18-221ENST00000582448 OR14K1Q8NGZ2 314 aa8.74□□□□□ -1.01
SS18-221ENST00000582448 BCL2L2Q92843 193 aaPredicted RBP8.74□□□□□ -1.01
SS18-221ENST00000582448 RFT1Q96AA3 541 aa8.74□□□□□ -1.01
SS18-221ENST00000582448 APOBEC3DQ96AK3 386 aaPredicted RBP8.74□□□□□ -1.01
SS18-221ENST00000582448 SGK3Q96BR1 496 aa8.74□□□□□ -1.01
SS18-221ENST00000582448 ADAT3Q96EY9 351 aaPredicted RBP8.74□□□□□ -1.01
SS18-221ENST00000582448 TECTBQ96PL2 329 aa8.74□□□□□ -1.01
SS18-221ENST00000582448 SOSTQ9BQB4 213 aa8.74□□□□□ -1.01
SS18-221ENST00000582448 SLC22A4Q9H015 551 aa8.74□□□□□ -1.01
SS18-221ENST00000582448 MOV10Q9HCE1 1003 aaKnown RBP8.74□□□□□ -1.01
SS18-221ENST00000582448 EIF3KQ9UBQ5 218 aaKnown RBP8.74□□□□□ -1.01
SS18-221ENST00000582448 A0A0B4J203 849 aa8.73□□□□□ -1.01
SS18-221ENST00000582448 A0A1W2PQ09 198 aa8.73□□□□□ -1.01
SS18-221ENST00000582448 LMX1BO60663 402 aa8.73□□□□□ -1.01
SS18-221ENST00000582448 IGLV3-1P01715 115 aa8.73□□□□□ -1.01
SS18-221ENST00000582448 ALDOBP05062 364 aa8.73□□□□□ -1.01
SS18-221ENST00000582448 ITGA5P08648 1049 aa8.73□□□□□ -1.01
SS18-221ENST00000582448 DANCRP0C864 163 aa8.73□□□□□ -1.01
SS18-221ENST00000582448 PRKACBP22694 351 aa8.73□□□□□ -1.01
SS18-221ENST00000582448 IL32P24001 234 aa8.73□□□□□ -1.01
SS18-221ENST00000582448 POU3F4P49335 361 aa8.73□□□□□ -1.01
SS18-221ENST00000582448 MMP15P51511 669 aa8.73□□□□□ -1.01
SS18-221ENST00000582448 AP3S2P59780 193 aa8.73□□□□□ -1.01
SS18-221ENST00000582448 IFITM3Q01628 133 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms