RNA–Protein interactions for RNA: ENST00000582092.1

SS18-220, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best)

Gene SS18, Length 215 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-220ENST00000582092 OSR2Q8N2R0 312 aa8□□□□□ -1.13
SS18-220ENST00000582092 BPIFB2Q8N4F0 458 aa8□□□□□ -1.13
SS18-220ENST00000582092 BHLHE23Q8NDY6 225 aa8□□□□□ -1.13
SS18-220ENST00000582092 TMEM104Q8NE00 496 aa8□□□□□ -1.13
SS18-220ENST00000582092 OR4C16Q8NGL9 310 aa8□□□□□ -1.13
SS18-220ENST00000582092 CA5BP1Q8WTZ4 195 aa8□□□□□ -1.13
SS18-220ENST00000582092 RND1Q92730 232 aa8□□□□□ -1.13
SS18-220ENST00000582092 DVL3Q92997 716 aaPredicted RBP8□□□□□ -1.13
SS18-220ENST00000582092 UPRTQ96BW1 309 aa8□□□□□ -1.13
SS18-220ENST00000582092 SCGB3A2Q96PL1 93 aa8□□□□□ -1.13
SS18-220ENST00000582092 NICN1Q9BSH3 213 aa8□□□□□ -1.13
SS18-220ENST00000582092 RTL8AQ9BWD3 113 aa8□□□□□ -1.13
SS18-220ENST00000582092 BCL2L14Q9BZR8 327 aa8□□□□□ -1.13
SS18-220ENST00000582092 OR51J1Q9H342 316 aa8□□□□□ -1.13
SS18-220ENST00000582092 GPR160Q9UJ42 338 aa8□□□□□ -1.13
SS18-220ENST00000582092 ZNF222Q9UK12 451 aa8□□□□□ -1.13
SS18-220ENST00000582092 ZNF503-AS2A6NEH8 195 aa7.99□□□□□ -1.13
SS18-220ENST00000582092 EEF1E1-BLOC1S5C9J1V9 151 aa7.99□□□□□ -1.13
SS18-220ENST00000582092 ANGPTL7O43827 346 aa7.99□□□□□ -1.13
SS18-220ENST00000582092 NDUFB6O95139 128 aa7.99□□□□□ -1.13
SS18-220ENST00000582092 CLDN14O95500 239 aa7.99□□□□□ -1.13
SS18-220ENST00000582092 CLDN1O95832 211 aa7.99□□□□□ -1.13
SS18-220ENST00000582092 RNF224P0DH78 156 aa7.99□□□□□ -1.13
SS18-220ENST00000582092 RAC2P15153 192 aa7.99□□□□□ -1.13
SS18-220ENST00000582092 ZNF14P17017 642 aaPredicted RBP7.99□□□□□ -1.13
SS18-220ENST00000582092 COX5AP20674 150 aa7.99□□□□□ -1.13
SS18-220ENST00000582092 ANOS1P23352 680 aa7.99□□□□□ -1.13
SS18-220ENST00000582092 BTCP35070 178 aa7.99□□□□□ -1.13
SS18-220ENST00000582092 HAAOP46952 286 aa7.99□□□□□ -1.13
SS18-220ENST00000582092 UCP2P55851 309 aa7.99□□□□□ -1.13
SS18-220ENST00000582092 TAS2R46P59540 309 aa7.99□□□□□ -1.13
SS18-220ENST00000582092 SELENOVP59797 346 aa7.99□□□□□ -1.13
SS18-220ENST00000582092 GNG3P63215 75 aa7.99□□□□□ -1.13
SS18-220ENST00000582092 CD83Q01151 205 aa7.99□□□□□ -1.13
SS18-220ENST00000582092 ZMYND11Q15326 602 aa7.99□□□□□ -1.13
SS18-220ENST00000582092 ZNF718Q3SXZ3 478 aa7.99□□□□□ -1.13
SS18-220ENST00000582092 CHRFAM7AQ494W8 412 aa7.99□□□□□ -1.13
SS18-220ENST00000582092 SPATA46Q5T0L3 261 aa7.99□□□□□ -1.13
SS18-220ENST00000582092 ATAD3CQ5T2N8 411 aa7.99□□□□□ -1.13
SS18-220ENST00000582092 SP5Q6BEB4 398 aaPredicted RBP7.99□□□□□ -1.13
SS18-220ENST00000582092 OR2T2Q6IF00 324 aa7.99□□□□□ -1.13
SS18-220ENST00000582092 C3P1Q6ZMU1 363 aa7.99□□□□□ -1.13
SS18-220ENST00000582092 DNM1P46Q6ZS02 220 aa7.99□□□□□ -1.13
SS18-220ENST00000582092 SLC25A26Q70HW3 274 aa7.99□□□□□ -1.13
SS18-220ENST00000582092 C1QL2Q7Z5L3 287 aa7.99□□□□□ -1.13
SS18-220ENST00000582092 SAXO1Q8IYX7 474 aa7.99□□□□□ -1.13
SS18-220ENST00000582092 INTS1Q8N201 2190 aaKnown RBP7.99□□□□□ -1.13
SS18-220ENST00000582092 ZNF611Q8N823 705 aa7.99□□□□□ -1.13
SS18-220ENST00000582092 OR51S1Q8NGJ8 323 aa7.99□□□□□ -1.13
SS18-220ENST00000582092 OR5H2Q8NGV7 314 aa7.99□□□□□ -1.13
SS18-220ENST00000582092 OR4K15Q8NH41 348 aa7.99□□□□□ -1.13
SS18-220ENST00000582092 NUDCD2Q8WVJ2 157 aa7.99□□□□□ -1.13
SS18-220ENST00000582092 GIMAP1Q8WWP7 306 aa7.99□□□□□ -1.13
SS18-220ENST00000582092 ITLN2Q8WWU7 325 aaPredicted RBP7.99□□□□□ -1.13
SS18-220ENST00000582092 POM121Q96HA1 1249 aa7.99□□□□□ -1.13
SS18-220ENST00000582092 ARHGAP5-AS1Q96IT6 56 aa7.99□□□□□ -1.13
SS18-220ENST00000582092 USB1Q9BQ65 265 aaKnown RBP7.99□□□□□ -1.13
SS18-220ENST00000582092 SLC25A21Q9BQT8 299 aaPredicted RBP7.99□□□□□ -1.13
SS18-220ENST00000582092 ST6GALNAC5Q9BVH7 336 aa7.99□□□□□ -1.13
SS18-220ENST00000582092 TM2D1Q9BX74 207 aa7.99□□□□□ -1.13
SS18-220ENST00000582092 BEX2Q9BXY8 128 aa7.99□□□□□ -1.13
SS18-220ENST00000582092 PECRQ9BY49 303 aa7.99□□□□□ -1.13
SS18-220ENST00000582092 BEX1Q9HBH7 125 aa7.99□□□□□ -1.13
SS18-220ENST00000582092 ZNF69Q9UC07 566 aa7.99□□□□□ -1.13
SS18-220ENST00000582092 SETXQ7Z333 2677 aaKnown RBP7.98□□□□□ -1.13
SS18-220ENST00000582092 PKDREJQ9NTG1 2253 aa7.98□□□□□ -1.13
SS18-220ENST00000582092 A0A0A6YYJ9 748 aa7.98□□□□□ -1.13
SS18-220ENST00000582092 OR5H1A6NKK0 313 aa7.98□□□□□ -1.13
SS18-220ENST00000582092 M0QYG6 137 aa7.98□□□□□ -1.13
SS18-220ENST00000582092 M0R1B8 84 aa7.98□□□□□ -1.13
SS18-220ENST00000582092 MSTNO14793 375 aa7.98□□□□□ -1.13
SS18-220ENST00000582092 TPD52L2O43399 206 aaKnown RBP7.98□□□□□ -1.13
SS18-220ENST00000582092 AKR7A2O43488 359 aa7.98□□□□□ -1.13
SS18-220ENST00000582092 CREBL2O60519 120 aaPredicted RBP7.98□□□□□ -1.13
SS18-220ENST00000582092 SMPD2O60906 423 aa7.98□□□□□ -1.13
SS18-220ENST00000582092 TNFSF13O75888 250 aa7.98□□□□□ -1.13
SS18-220ENST00000582092 CA6P23280 308 aa7.98□□□□□ -1.13
SS18-220ENST00000582092 WNT5AP41221 380 aa7.98□□□□□ -1.13
SS18-220ENST00000582092 ARPC4P59998 168 aa7.98□□□□□ -1.13
SS18-220ENST00000582092 ZP1P60852 638 aa7.98□□□□□ -1.13
SS18-220ENST00000582092 OR8G1Q15617 311 aa7.98□□□□□ -1.13
SS18-220ENST00000582092 TAF9Q16594 264 aa7.98□□□□□ -1.13
SS18-220ENST00000582092 NKPD1Q17RQ9 610 aa7.98□□□□□ -1.13
SS18-220ENST00000582092 C4orf46Q504U0 113 aa7.98□□□□□ -1.13
SS18-220ENST00000582092 TIMM23BQ5SRD1 257 aa7.98□□□□□ -1.13
SS18-220ENST00000582092 C1QTNF12Q5T7M4 302 aa7.98□□□□□ -1.13
SS18-220ENST00000582092 CD276Q5ZPR3 534 aa7.98□□□□□ -1.13
SS18-220ENST00000582092 FAAP20Q6NZ36 180 aa7.98□□□□□ -1.13
SS18-220ENST00000582092 FIP1L1Q6UN15 594 aaKnown RBP7.98□□□□□ -1.13
SS18-220ENST00000582092 FBXW12Q6X9E4 464 aa7.98□□□□□ -1.13
SS18-220ENST00000582092 IDO2Q6ZQW0 420 aa7.98□□□□□ -1.13
SS18-220ENST00000582092 RNF144BQ7Z419 303 aa7.98□□□□□ -1.13
SS18-220ENST00000582092 BIVMQ86UB2 503 aa7.98□□□□□ -1.13
SS18-220ENST00000582092 MED12LQ86YW9 2145 aa7.98□□□□□ -1.13
SS18-220ENST00000582092 FAM89BQ8N5H3 189 aa7.98□□□□□ -1.13
SS18-220ENST00000582092 DRAXINQ8NBI3 349 aaPredicted RBP7.98□□□□□ -1.13
SS18-220ENST00000582092 SLC25A40Q8TBP6 338 aa7.98□□□□□ -1.13
SS18-220ENST00000582092 NEK7Q8TDX7 302 aa7.98□□□□□ -1.13
SS18-220ENST00000582092 LRRC46Q96FV0 321 aa7.98□□□□□ -1.13
SS18-220ENST00000582092 BOD1Q96IK1 185 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms