RNA–Protein interactions for RNA: ENST00000581265.1

RFFL-209, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 596 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-209ENST00000581265 XPNPEP2O43895 674 aa8.56□□□□□ -1.04
RFFL-209ENST00000581265 NXPH2O95156 264 aa8.56□□□□□ -1.04
RFFL-209ENST00000581265 RBP4P02753 201 aa8.56□□□□□ -1.04
RFFL-209ENST00000581265 COX7A1P24310 79 aa8.56□□□□□ -1.04
RFFL-209ENST00000581265 CEBPDP49716 269 aaPredicted RBP8.56□□□□□ -1.04
RFFL-209ENST00000581265 RAB13P51153 203 aa8.56□□□□□ -1.04
RFFL-209ENST00000581265 ZNF273Q14593 569 aa8.56□□□□□ -1.04
RFFL-209ENST00000581265 CCBE1Q6UXH8 406 aaPredicted RBP8.56□□□□□ -1.04
RFFL-209ENST00000581265 Q6ZSR3 168 aa8.56□□□□□ -1.04
RFFL-209ENST00000581265 ELMOD2Q8IZ81 293 aa8.56□□□□□ -1.04
RFFL-209ENST00000581265 DYNAPQ8N1N2 210 aa8.56□□□□□ -1.04
RFFL-209ENST00000581265 OR11H6Q8NGC7 330 aa8.56□□□□□ -1.04
RFFL-209ENST00000581265 OR14K1Q8NGZ2 314 aa8.56□□□□□ -1.04
RFFL-209ENST00000581265 CCDC124Q96CT7 223 aaKnown RBP8.56□□□□□ -1.04
RFFL-209ENST00000581265 TVP23BQ9NYZ1 205 aa8.56□□□□□ -1.04
RFFL-209ENST00000581265 DNAJB9Q9UBS3 223 aa8.56□□□□□ -1.04
RFFL-209ENST00000581265 COPS3Q9UNS2 423 aa8.56□□□□□ -1.04
RFFL-209ENST00000581265 TCF19Q9Y242 345 aa8.56□□□□□ -1.04
RFFL-209ENST00000581265 V9GYS6 101 aa8.56□□□□□ -1.04
RFFL-209ENST00000581265 A6NDX4 124 aa8.55□□□□□ -1.04
RFFL-209ENST00000581265 ODF3BA8MYP8 253 aa8.55□□□□□ -1.04
RFFL-209ENST00000581265 ZNF737O75373 536 aa8.55□□□□□ -1.04
RFFL-209ENST00000581265 FBXO24O75426 580 aa8.55□□□□□ -1.04
RFFL-209ENST00000581265 MRPL3P09001 348 aaKnown RBP8.55□□□□□ -1.04
RFFL-209ENST00000581265 ZNF728P0DKX0 622 aa8.55□□□□□ -1.04
RFFL-209ENST00000581265 CD28P10747 220 aa8.55□□□□□ -1.04
RFFL-209ENST00000581265 DYNLT3P51808 116 aa8.55□□□□□ -1.04
RFFL-209ENST00000581265 CRISP1P54107 249 aa8.55□□□□□ -1.04
RFFL-209ENST00000581265 ACTR3P61158 418 aa8.55□□□□□ -1.04
RFFL-209ENST00000581265 EFNB1P98172 346 aa8.55□□□□□ -1.04
RFFL-209ENST00000581265 MFGE8Q08431 387 aaPredicted RBP8.55□□□□□ -1.04
RFFL-209ENST00000581265 HABP2Q14520 560 aaPredicted RBP8.55□□□□□ -1.04
RFFL-209ENST00000581265 CNN3Q15417 329 aaKnown RBP8.55□□□□□ -1.04
RFFL-209ENST00000581265 SSX2Q16385 188 aa8.55□□□□□ -1.04
RFFL-209ENST00000581265 OXLD1Q5BKU9 147 aa8.55□□□□□ -1.04
RFFL-209ENST00000581265 LDLRAD2Q5SZI1 272 aa8.55□□□□□ -1.04
RFFL-209ENST00000581265 ZNF626Q68DY1 528 aa8.55□□□□□ -1.04
RFFL-209ENST00000581265 ZNF322Q6U7Q0 402 aaPredicted RBP8.55□□□□□ -1.04
RFFL-209ENST00000581265 ZNF782Q6ZMW2 699 aaPredicted RBP8.55□□□□□ -1.04
RFFL-209ENST00000581265 ASRGL1Q7L266 308 aa8.55□□□□□ -1.04
RFFL-209ENST00000581265 NDUFA11Q86Y39 141 aa8.55□□□□□ -1.04
RFFL-209ENST00000581265 OR4S1Q8NGB4 309 aa8.55□□□□□ -1.04
RFFL-209ENST00000581265 OR13D1Q8NGV5 346 aa8.55□□□□□ -1.04
RFFL-209ENST00000581265 RPS4Y2Q8TD47 263 aa8.55□□□□□ -1.04
RFFL-209ENST00000581265 DNAJC9Q8WXX5 260 aa8.55□□□□□ -1.04
RFFL-209ENST00000581265 FOXRED1Q96CU9 486 aaPredicted RBP8.55□□□□□ -1.04
RFFL-209ENST00000581265 NRBF2Q96F24 287 aa8.55□□□□□ -1.04
RFFL-209ENST00000581265 CNN2Q99439 309 aaKnown RBP8.55□□□□□ -1.04
RFFL-209ENST00000581265 MNTQ99583 582 aa8.55□□□□□ -1.04
RFFL-209ENST00000581265 NKX3-1Q99801 234 aaPredicted RBP8.55□□□□□ -1.04
RFFL-209ENST00000581265 PKIBQ9C010 78 aa8.55□□□□□ -1.04
RFFL-209ENST00000581265 PRSS22Q9GZN4 317 aa8.55□□□□□ -1.04
RFFL-209ENST00000581265 WNT10AQ9GZT5 417 aa8.55□□□□□ -1.04
RFFL-209ENST00000581265 MOB1AQ9H8S9 216 aa8.55□□□□□ -1.04
RFFL-209ENST00000581265 GPR173Q9NS66 373 aa8.55□□□□□ -1.04
RFFL-209ENST00000581265 OR14J1Q9UGF5 321 aa8.55□□□□□ -1.04
RFFL-209ENST00000581265 PITPNC1Q9UKF7 332 aa8.55□□□□□ -1.04
RFFL-209ENST00000581265 IKZF2Q9UKS7 526 aa8.55□□□□□ -1.04
RFFL-209ENST00000581265 ADARB2-AS1A8MUL3 147 aa8.54□□□□□ -1.04
RFFL-209ENST00000581265 LOC110117498-PIK3R3F6TDL0 507 aa8.54□□□□□ -1.04
RFFL-209ENST00000581265 ARG1P05089 322 aa8.54□□□□□ -1.04
RFFL-209ENST00000581265 CHRM2P08172 466 aa8.54□□□□□ -1.04
RFFL-209ENST00000581265 PIPP12273 146 aaPredicted RBP8.54□□□□□ -1.04
RFFL-209ENST00000581265 CXCR4P61073 352 aa8.54□□□□□ -1.04
RFFL-209ENST00000581265 COL10A1Q03692 680 aa8.54□□□□□ -1.04
RFFL-209ENST00000581265 IL24Q13007 206 aa8.54□□□□□ -1.04
RFFL-209ENST00000581265 PTGES3Q15185 160 aaKnown RBP8.54□□□□□ -1.04
RFFL-209ENST00000581265 NSUN5P1Q3KNT7 163 aa8.54□□□□□ -1.04
RFFL-209ENST00000581265 MEPCEQ7L2J0 689 aaKnown RBP8.54□□□□□ -1.04
RFFL-209ENST00000581265 ANGPTL5Q86XS5 388 aa8.54□□□□□ -1.04
RFFL-209ENST00000581265 LYG1Q8N1E2 194 aa8.54□□□□□ -1.04
RFFL-209ENST00000581265 WFDC9Q8NEX5 89 aa8.54□□□□□ -1.04
RFFL-209ENST00000581265 OR4F17Q8NGA8 305 aa8.54□□□□□ -1.04
RFFL-209ENST00000581265 R3HDM4Q96D70 268 aa8.54□□□□□ -1.04
RFFL-209ENST00000581265 OR4F4Q96R69 305 aa8.54□□□□□ -1.04
RFFL-209ENST00000581265 APOL4Q9BPW4 351 aa8.54□□□□□ -1.04
RFFL-209ENST00000581265 THTPAQ9BU02 230 aa8.54□□□□□ -1.04
RFFL-209ENST00000581265 MMP28Q9H239 520 aa8.54□□□□□ -1.04
RFFL-209ENST00000581265 SEBOXQ9HB31 216 aaPredicted RBP8.54□□□□□ -1.04
RFFL-209ENST00000581265 ABCB10Q9NRK6 738 aa8.54□□□□□ -1.04
RFFL-209ENST00000581265 NECAP2Q9NVZ3 263 aa8.54□□□□□ -1.04
RFFL-209ENST00000581265 OR52A1Q9UKL2 312 aa8.54□□□□□ -1.04
RFFL-209ENST00000581265 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP8.54□□□□□ -1.04
RFFL-209ENST00000581265 SLC22A13Q9Y226 551 aa8.54□□□□□ -1.04
RFFL-209ENST00000581265 SNX5Q9Y5X3 404 aa8.54□□□□□ -1.04
RFFL-209ENST00000581265 R4GMQ9 66 aa8.54□□□□□ -1.04
RFFL-209ENST00000581265 A6NIN4 97 aa8.53□□□□□ -1.04
RFFL-209ENST00000581265 F8VVB4 439 aa8.53□□□□□ -1.04
RFFL-209ENST00000581265 F8VWA3 439 aa8.53□□□□□ -1.04
RFFL-209ENST00000581265 MAGEB4O15481 346 aaPredicted RBP8.53□□□□□ -1.04
RFFL-209ENST00000581265 PRKYO43930 277 aa8.53□□□□□ -1.04
RFFL-209ENST00000581265 IGHV1-8P0DP01 117 aa8.53□□□□□ -1.04
RFFL-209ENST00000581265 CCL1P22362 96 aa8.53□□□□□ -1.04
RFFL-209ENST00000581265 ESRRGP62508 458 aa8.53□□□□□ -1.04
RFFL-209ENST00000581265 BLCAPP62952 87 aa8.53□□□□□ -1.04
RFFL-209ENST00000581265 CBX1P83916 185 aa8.53□□□□□ -1.04
RFFL-209ENST00000581265 MEF2CQ06413 473 aaPredicted RBP8.53□□□□□ -1.04
RFFL-209ENST00000581265 PLA1AQ53H76 456 aa8.53□□□□□ -1.04
RFFL-209ENST00000581265 BCL2L15Q5TBC7 163 aa8.53□□□□□ -1.04
RFFL-209ENST00000581265 MINOS1Q5TGZ0 78 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms