RNA–Protein interactions for RNA: ENST00000580237.5

NDEL1-208, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 4

Gene NDEL1, Length 577 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-208ENST00000580237 LHX4Q969G2 390 aa9.01□□□□□ -0.97
NDEL1-208ENST00000580237 SLAMF9Q96A28 289 aa9.01□□□□□ -0.97
NDEL1-208ENST00000580237 FGGYQ96C11 551 aa9.01□□□□□ -0.97
NDEL1-208ENST00000580237 ADAT3Q96EY9 351 aaPredicted RBP9.01□□□□□ -0.97
NDEL1-208ENST00000580237 CEP19Q96LK0 163 aa9.01□□□□□ -0.97
NDEL1-208ENST00000580237 DUX5Q96PT3 197 aa9.01□□□□□ -0.97
NDEL1-208ENST00000580237 TBX15Q96SF7 602 aa9.01□□□□□ -0.97
NDEL1-208ENST00000580237 NRIP2Q9BQI9 281 aa9.01□□□□□ -0.97
NDEL1-208ENST00000580237 DCTN5Q9BTE1 182 aa9.01□□□□□ -0.97
NDEL1-208ENST00000580237 SIRPDQ9H106 197 aa9.01□□□□□ -0.97
NDEL1-208ENST00000580237 CNTD2Q9H8S5 307 aa9.01□□□□□ -0.97
NDEL1-208ENST00000580237 ISG20L2Q9H9L3 353 aaKnown RBP9.01□□□□□ -0.97
NDEL1-208ENST00000580237 ZMAT3Q9HA38 289 aaKnown RBP9.01□□□□□ -0.97
NDEL1-208ENST00000580237 ELL3Q9HB65 397 aaPredicted RBP9.01□□□□□ -0.97
NDEL1-208ENST00000580237 NEK6Q9HC98 313 aa9.01□□□□□ -0.97
NDEL1-208ENST00000580237 SIRT7Q9NRC8 400 aa9.01□□□□□ -0.97
NDEL1-208ENST00000580237 CHCHD3Q9NX63 227 aaKnown RBP9.01□□□□□ -0.97
NDEL1-208ENST00000580237 KPTNQ9Y664 436 aa9.01□□□□□ -0.97
NDEL1-208ENST00000580237 FBN1P35555 2871 aaKnown RBP9□□□□□ -0.97
NDEL1-208ENST00000580237 STAB1Q9NY15 2570 aa9□□□□□ -0.97
NDEL1-208ENST00000580237 CUBNO60494 3623 aa9□□□□□ -0.97
NDEL1-208ENST00000580237 WBP4O75554 376 aaKnown RBP9□□□□□ -0.97
NDEL1-208ENST00000580237 FCN3O75636 299 aa9□□□□□ -0.97
NDEL1-208ENST00000580237 ISG15P05161 165 aa9□□□□□ -0.97
NDEL1-208ENST00000580237 RPSAP08865 295 aaKnown RBP9□□□□□ -0.97
NDEL1-208ENST00000580237 AMY2BP19961 511 aa9□□□□□ -0.97
NDEL1-208ENST00000580237 MPZP25189 248 aa9□□□□□ -0.97
NDEL1-208ENST00000580237 CAPGP40121 348 aa9□□□□□ -0.97
NDEL1-208ENST00000580237 TGM4P49221 684 aa9□□□□□ -0.97
NDEL1-208ENST00000580237 RBP2P50120 134 aa9□□□□□ -0.97
NDEL1-208ENST00000580237 MTCP1P56278 107 aa9□□□□□ -0.97
NDEL1-208ENST00000580237 CAV3P56539 151 aa9□□□□□ -0.97
NDEL1-208ENST00000580237 UBA52P62987 128 aaKnown RBP9□□□□□ -0.97
NDEL1-208ENST00000580237 C12orf54Q6X4T0 127 aa9□□□□□ -0.97
NDEL1-208ENST00000580237 TMPRSS11AQ6ZMR5 421 aa9□□□□□ -0.97
NDEL1-208ENST00000580237 LHFPL2Q6ZUX7 228 aa9□□□□□ -0.97
NDEL1-208ENST00000580237 VMO1Q7Z5L0 202 aa9□□□□□ -0.97
NDEL1-208ENST00000580237 PDZD9Q8IXQ8 264 aa9□□□□□ -0.97
NDEL1-208ENST00000580237 PIP4P2Q8N4L2 257 aa9□□□□□ -0.97
NDEL1-208ENST00000580237 ZNF561Q8N587 486 aa9□□□□□ -0.97
NDEL1-208ENST00000580237 KIR3DL3Q8N743 410 aa9□□□□□ -0.97
NDEL1-208ENST00000580237 ASCC1Q8N9N2 400 aaKnown RBP9□□□□□ -0.97
NDEL1-208ENST00000580237 OR13C9Q8NGT0 318 aa9□□□□□ -0.97
NDEL1-208ENST00000580237 OR5AK2Q8NH90 309 aa9□□□□□ -0.97
NDEL1-208ENST00000580237 FAM216AQ8WUB2 273 aa9□□□□□ -0.97
NDEL1-208ENST00000580237 EMG1Q92979 244 aaKnown RBP9□□□□□ -0.97
NDEL1-208ENST00000580237 SPSB1Q96BD6 273 aa9□□□□□ -0.97
NDEL1-208ENST00000580237 OPALINQ96PE5 141 aa9□□□□□ -0.97
NDEL1-208ENST00000580237 DHDHQ9UQ10 334 aa9□□□□□ -0.97
NDEL1-208ENST00000580237 TRBV23-1A0A0A0MS06 115 aa8.99□□□□□ -0.97
NDEL1-208ENST00000580237 IGHV1-69DA0A0B4J2H0 117 aa8.99□□□□□ -0.97
NDEL1-208ENST00000580237 TRBV2A0A0J9YWF9 115 aa8.99□□□□□ -0.97
NDEL1-208ENST00000580237 MDFIC2A0A1B0GVS7 189 aa8.99□□□□□ -0.97
NDEL1-208ENST00000580237 A0A1W2PPH5 198 aa8.99□□□□□ -0.97
NDEL1-208ENST00000580237 OR4C45A6NMZ5 311 aa8.99□□□□□ -0.97
NDEL1-208ENST00000580237 CASQ2O14958 399 aaPredicted RBP8.99□□□□□ -0.97
NDEL1-208ENST00000580237 NOS1APO75052 506 aaPredicted RBP8.99□□□□□ -0.97
NDEL1-208ENST00000580237 ZFPL1O95159 310 aa8.99□□□□□ -0.97
NDEL1-208ENST00000580237 KNG1P01042 644 aa8.99□□□□□ -0.97
NDEL1-208ENST00000580237 IGHV1-69P01742 117 aa8.99□□□□□ -0.97
NDEL1-208ENST00000580237 HCKP08631 526 aa8.99□□□□□ -0.97
NDEL1-208ENST00000580237 MMP9P14780 707 aa8.99□□□□□ -0.97
NDEL1-208ENST00000580237 ATF1P18846 271 aa8.99□□□□□ -0.97
NDEL1-208ENST00000580237 EEF1B2P24534 225 aaKnown RBP8.99□□□□□ -0.97
NDEL1-208ENST00000580237 DCKP27707 260 aa8.99□□□□□ -0.97
NDEL1-208ENST00000580237 PRDX2P32119 198 aa8.99□□□□□ -0.97
NDEL1-208ENST00000580237 BPIFB3P59826 476 aa8.99□□□□□ -0.97
NDEL1-208ENST00000580237 GUCA2AQ02747 115 aa8.99□□□□□ -0.97
NDEL1-208ENST00000580237 OGFRL1Q5TC84 451 aaPredicted RBP8.99□□□□□ -0.97
NDEL1-208ENST00000580237 C9orf139Q6ZV77 190 aa8.99□□□□□ -0.97
NDEL1-208ENST00000580237 UTS2BQ765I0 119 aa8.99□□□□□ -0.97
NDEL1-208ENST00000580237 MKXQ8IYA7 352 aa8.99□□□□□ -0.97
NDEL1-208ENST00000580237 Q8IYB0 196 aa8.99□□□□□ -0.97
NDEL1-208ENST00000580237 ZDHHC22Q8N966 263 aa8.99□□□□□ -0.97
NDEL1-208ENST00000580237 DNAAF1Q8NEP3 725 aa8.99□□□□□ -0.97
NDEL1-208ENST00000580237 OR51A4Q8NGJ6 313 aa8.99□□□□□ -0.97
NDEL1-208ENST00000580237 OR10AC1Q8NH08 325 aa8.99□□□□□ -0.97
NDEL1-208ENST00000580237 C8orf46Q8TAG6 207 aa8.99□□□□□ -0.97
NDEL1-208ENST00000580237 RNF166Q96A37 237 aaPredicted RBP8.99□□□□□ -0.97
NDEL1-208ENST00000580237 SLC25A28Q96A46 364 aa8.99□□□□□ -0.97
NDEL1-208ENST00000580237 RFT1Q96AA3 541 aa8.99□□□□□ -0.97
NDEL1-208ENST00000580237 SDSLQ96GA7 329 aa8.99□□□□□ -0.97
NDEL1-208ENST00000580237 ZNF48Q96MX3 618 aaPredicted RBP8.99□□□□□ -0.97
NDEL1-208ENST00000580237 PDCD1LG2Q9BQ51 273 aa8.99□□□□□ -0.97
NDEL1-208ENST00000580237 DCLRE1BQ9H816 532 aa8.99□□□□□ -0.97
NDEL1-208ENST00000580237 FGF20Q9NP95 211 aaPredicted RBP8.99□□□□□ -0.97
NDEL1-208ENST00000580237 ESM1Q9NQ30 184 aa8.99□□□□□ -0.97
NDEL1-208ENST00000580237 MRPS18AQ9NVS2 196 aaKnown RBP8.99□□□□□ -0.97
NDEL1-208ENST00000580237 ZNF222Q9UK12 451 aa8.99□□□□□ -0.97
NDEL1-208ENST00000580237 EXOSC1Q9Y3B2 195 aaKnown RBP8.99□□□□□ -0.97
NDEL1-208ENST00000580237 IGKV1-27A0A075B6S5 117 aa8.98□□□□□ -0.97
NDEL1-208ENST00000580237 CENPVL3A0A0U1RRI6 287 aa8.98□□□□□ -0.97
NDEL1-208ENST00000580237 E9PI62 339 aa8.98□□□□□ -0.97
NDEL1-208ENST00000580237 H0YAE9 185 aa8.98□□□□□ -0.97
NDEL1-208ENST00000580237 H0YHG0 523 aa8.98□□□□□ -0.97
NDEL1-208ENST00000580237 CD2P06729 351 aa8.98□□□□□ -0.97
NDEL1-208ENST00000580237 LIMS3P0CW19 117 aa8.98□□□□□ -0.97
NDEL1-208ENST00000580237 LIMS4P0CW20 117 aa8.98□□□□□ -0.97
NDEL1-208ENST00000580237 PIPP12273 146 aaPredicted RBP8.98□□□□□ -0.97
NDEL1-208ENST00000580237 PRTN3P24158 256 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms