RNA–Protein interactions for RNA: ENST00000579449.1

TSEN54-206, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 2

Gene TSEN54, Length 786 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-206ENST00000579449 BIVMQ86UB2 503 aa11.73□□□□□ -0.53
TSEN54-206ENST00000579449 CCDC190Q86UF4 302 aa11.73□□□□□ -0.53
TSEN54-206ENST00000579449 MOGAT3Q86VF5 341 aa11.73□□□□□ -0.53
TSEN54-206ENST00000579449 PTX4Q96A99 478 aa11.73□□□□□ -0.53
TSEN54-206ENST00000579449 DIRAS2Q96HU8 199 aa11.73□□□□□ -0.53
TSEN54-206ENST00000579449 ZNF488Q96MN9 340 aa11.73□□□□□ -0.53
TSEN54-206ENST00000579449 GAL3ST1Q99999 423 aa11.73□□□□□ -0.53
TSEN54-206ENST00000579449 TRAF4Q9BUZ4 470 aaPredicted RBP11.73□□□□□ -0.53
TSEN54-206ENST00000579449 TMEM59Q9BXS4 323 aa11.73□□□□□ -0.53
TSEN54-206ENST00000579449 CST11Q9H112 138 aa11.73□□□□□ -0.53
TSEN54-206ENST00000579449 ABCG5Q9H222 651 aa11.73□□□□□ -0.53
TSEN54-206ENST00000579449 FN3KRPQ9HA64 309 aa11.73□□□□□ -0.53
TSEN54-206ENST00000579449 C1orf123Q9NWV4 160 aa11.73□□□□□ -0.53
TSEN54-206ENST00000579449 TENM4Q6N022 2769 aa11.72□□□□□ -0.53
TSEN54-206ENST00000579449 hCG_1807616A0A1W2PRN6 198 aa11.72□□□□□ -0.53
TSEN54-206ENST00000579449 F8VVB4 439 aa11.72□□□□□ -0.53
TSEN54-206ENST00000579449 F8VWA3 439 aa11.72□□□□□ -0.53
TSEN54-206ENST00000579449 ZNF780AO75290 641 aaPredicted RBP11.72□□□□□ -0.53
TSEN54-206ENST00000579449 PGA5P0DJD9 388 aa11.72□□□□□ -0.53
TSEN54-206ENST00000579449 BMP4P12644 408 aa11.72□□□□□ -0.53
TSEN54-206ENST00000579449 MGMTP16455 207 aa11.72□□□□□ -0.53
TSEN54-206ENST00000579449 TESK1Q15569 626 aa11.72□□□□□ -0.53
TSEN54-206ENST00000579449 PCGF3Q3KNV8 242 aa11.72□□□□□ -0.53
TSEN54-206ENST00000579449 CNIH2Q6PI25 160 aa11.72□□□□□ -0.53
TSEN54-206ENST00000579449 WDR82Q6UXN9 313 aa11.72□□□□□ -0.53
TSEN54-206ENST00000579449 CDH24Q86UP0 819 aa11.72□□□□□ -0.53
TSEN54-206ENST00000579449 DTX3Q8N9I9 347 aa11.72□□□□□ -0.53
TSEN54-206ENST00000579449 OR4M1Q8NGD0 313 aa11.72□□□□□ -0.53
TSEN54-206ENST00000579449 RAB40AQ8WXH6 277 aa11.72□□□□□ -0.53
TSEN54-206ENST00000579449 VRK1Q99986 396 aaPredicted RBP11.72□□□□□ -0.53
TSEN54-206ENST00000579449 EGLN1Q9GZT9 426 aa11.72□□□□□ -0.53
TSEN54-206ENST00000579449 ATG5Q9H1Y0 275 aa11.72□□□□□ -0.53
TSEN54-206ENST00000579449 CLEC4MQ9H2X3 399 aaPredicted RBP11.72□□□□□ -0.53
TSEN54-206ENST00000579449 AKIP1Q9NQ31 210 aa11.72□□□□□ -0.53
TSEN54-206ENST00000579449 PCDHB16Q9NRJ7 776 aa11.72□□□□□ -0.53
TSEN54-206ENST00000579449 DECR2Q9NUI1 292 aa11.72□□□□□ -0.53
TSEN54-206ENST00000579449 RBFOX1Q9NWB1 397 aaKnown RBP11.72□□□□□ -0.53
TSEN54-206ENST00000579449 EXTL2Q9UBQ6 330 aa11.72□□□□□ -0.53
TSEN54-206ENST00000579449 FBXO9Q9UK97 447 aaPredicted RBP11.72□□□□□ -0.53
TSEN54-206ENST00000579449 LAMP3Q9UQV4 416 aa11.72□□□□□ -0.53
TSEN54-206ENST00000579449 TANC2Q9HCD6 1990 aa11.72□□□□□ -0.53
TSEN54-206ENST00000579449 LRBAP50851 2863 aa11.71□□□□□ -0.53
TSEN54-206ENST00000579449 UTP20O75691 2785 aaKnown RBP11.71□□□□□ -0.53
TSEN54-206ENST00000579449 A0A0A6YYD4 124 aa11.71□□□□□ -0.53
TSEN54-206ENST00000579449 C3orf80F5H4A9 247 aa11.71□□□□□ -0.53
TSEN54-206ENST00000579449 AKR7A2O43488 359 aa11.71□□□□□ -0.53
TSEN54-206ENST00000579449 NOS1APO75052 506 aaPredicted RBP11.71□□□□□ -0.53
TSEN54-206ENST00000579449 ACAA1P09110 424 aaPredicted RBP11.71□□□□□ -0.53
TSEN54-206ENST00000579449 GTF2F2P13984 249 aa11.71□□□□□ -0.53
TSEN54-206ENST00000579449 TNFRSF1AP19438 455 aa11.71□□□□□ -0.53
TSEN54-206ENST00000579449 RBMXP38159 391 aaKnown RBP11.71□□□□□ -0.53
TSEN54-206ENST00000579449 ERVK11-1P61568 191 aa11.71□□□□□ -0.53
TSEN54-206ENST00000579449 RPS27AP62979 156 aaKnown RBP11.71□□□□□ -0.53
TSEN54-206ENST00000579449 MADCAM1Q13477 382 aa11.71□□□□□ -0.53
TSEN54-206ENST00000579449 ELP2Q6IA86 826 aa11.71□□□□□ -0.53
TSEN54-206ENST00000579449 METAP1DQ6UB28 335 aaPredicted RBP11.71□□□□□ -0.53
TSEN54-206ENST00000579449 ZNF295-AS1Q8N0V1 137 aa11.71□□□□□ -0.53
TSEN54-206ENST00000579449 OSR2Q8N2R0 312 aa11.71□□□□□ -0.53
TSEN54-206ENST00000579449 POC1AQ8NBT0 407 aa11.71□□□□□ -0.53
TSEN54-206ENST00000579449 Q8NFD4 153 aa11.71□□□□□ -0.53
TSEN54-206ENST00000579449 OR51T1Q8NGJ9 327 aa11.71□□□□□ -0.53
TSEN54-206ENST00000579449 S100A16Q96FQ6 103 aaKnown RBP11.71□□□□□ -0.53
TSEN54-206ENST00000579449 PSMG3-AS1Q96PY0 264 aa11.71□□□□□ -0.53
TSEN54-206ENST00000579449 NICN1Q9BSH3 213 aa11.71□□□□□ -0.53
TSEN54-206ENST00000579449 URM1Q9BTM9 101 aaKnown RBP11.71□□□□□ -0.53
TSEN54-206ENST00000579449 SELENOIQ9C0D9 397 aa11.71□□□□□ -0.53
TSEN54-206ENST00000579449 LPAR5Q9H1C0 372 aa11.71□□□□□ -0.53
TSEN54-206ENST00000579449 PLEKHF2Q9H8W4 249 aa11.71□□□□□ -0.53
TSEN54-206ENST00000579449 SAP30LQ9HAJ7 183 aa11.71□□□□□ -0.53
TSEN54-206ENST00000579449 GCM1Q9NP62 436 aa11.71□□□□□ -0.53
TSEN54-206ENST00000579449 METTL21EPA6NDL7 271 aa11.7□□□□□ -0.54
TSEN54-206ENST00000579449 INHBBP09529 407 aa11.7□□□□□ -0.54
TSEN54-206ENST00000579449 PRKACAP17612 351 aa11.7□□□□□ -0.54
TSEN54-206ENST00000579449 CDK2P24941 298 aa11.7□□□□□ -0.54
TSEN54-206ENST00000579449 CFHR2P36980 270 aa11.7□□□□□ -0.54
TSEN54-206ENST00000579449 ETV6P41212 452 aa11.7□□□□□ -0.54
TSEN54-206ENST00000579449 GMFBP60983 142 aa11.7□□□□□ -0.54
TSEN54-206ENST00000579449 FGF12P61328 243 aa11.7□□□□□ -0.54
TSEN54-206ENST00000579449 HOXA4Q00056 320 aaPredicted RBP11.7□□□□□ -0.54
TSEN54-206ENST00000579449 PIGYQ3MUY2 71 aa11.7□□□□□ -0.54
TSEN54-206ENST00000579449 SPANXN2Q5MJ10 180 aa11.7□□□□□ -0.54
TSEN54-206ENST00000579449 Q8IYB0 196 aa11.7□□□□□ -0.54
TSEN54-206ENST00000579449 IZUMO1Q8IYV9 350 aa11.7□□□□□ -0.54
TSEN54-206ENST00000579449 FAM58AQ8N1B3 248 aa11.7□□□□□ -0.54
TSEN54-206ENST00000579449 MFSD4AQ8N468 514 aa11.7□□□□□ -0.54
TSEN54-206ENST00000579449 OR10Z1Q8NGY1 313 aa11.7□□□□□ -0.54
TSEN54-206ENST00000579449 Q8TCH9 128 aa11.7□□□□□ -0.54
TSEN54-206ENST00000579449 LRRC29Q8WV35 223 aa11.7□□□□□ -0.54
TSEN54-206ENST00000579449 S100ZQ8WXG8 99 aa11.7□□□□□ -0.54
TSEN54-206ENST00000579449 EMG1Q92979 244 aaKnown RBP11.7□□□□□ -0.54
TSEN54-206ENST00000579449 ERGIC1Q969X5 290 aa11.7□□□□□ -0.54
TSEN54-206ENST00000579449 MRPS24Q96EL2 167 aaKnown RBP11.7□□□□□ -0.54
TSEN54-206ENST00000579449 Q96M66 194 aa11.7□□□□□ -0.54
TSEN54-206ENST00000579449 SOSTQ9BQB4 213 aa11.7□□□□□ -0.54
TSEN54-206ENST00000579449 NRIP2Q9BQI9 281 aa11.7□□□□□ -0.54
TSEN54-206ENST00000579449 TM2D1Q9BX74 207 aa11.7□□□□□ -0.54
TSEN54-206ENST00000579449 CACNG6Q9BXT2 260 aa11.7□□□□□ -0.54
TSEN54-206ENST00000579449 RHOFQ9HBH0 211 aa11.7□□□□□ -0.54
TSEN54-206ENST00000579449 HMG20AQ9NP66 347 aa11.7□□□□□ -0.54
TSEN54-206ENST00000579449 TREM2Q9NZC2 230 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms