RNA–Protein interactions for RNA: ENST00000578995.5

SMARCE1-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-215ENST00000578995 BARX1Q9HBU1 254 aaPredicted RBP3.16□□□□□ -1.9
SMARCE1-215ENST00000578995 MYOZ1Q9NP98 299 aaPredicted RBP3.16□□□□□ -1.9
SMARCE1-215ENST00000578995 TRIM36Q9NQ86 728 aa3.16□□□□□ -1.9
SMARCE1-215ENST00000578995 GPR173Q9NS66 373 aa3.16□□□□□ -1.9
SMARCE1-215ENST00000578995 TMEM106BQ9NUM4 274 aa3.16□□□□□ -1.9
SMARCE1-215ENST00000578995 TMEM100Q9NV29 134 aa3.16□□□□□ -1.9
SMARCE1-215ENST00000578995 NDUFB11Q9NX14 153 aa3.16□□□□□ -1.9
SMARCE1-215ENST00000578995 SCN3BQ9NY72 215 aa3.16□□□□□ -1.9
SMARCE1-215ENST00000578995 CTSZQ9UBR2 303 aa3.16□□□□□ -1.9
SMARCE1-215ENST00000578995 DUX4Q9UBX2 424 aa3.16□□□□□ -1.9
SMARCE1-215ENST00000578995 ENPP5Q9UJA9 477 aa3.16□□□□□ -1.9
SMARCE1-215ENST00000578995 HHLA2Q9UM44 414 aa3.16□□□□□ -1.9
SMARCE1-215ENST00000578995 PIGLQ9Y2B2 252 aa3.16□□□□□ -1.9
SMARCE1-215ENST00000578995 WIPI2Q9Y4P8 454 aa3.16□□□□□ -1.9
SMARCE1-215ENST00000578995 N6AMT1Q9Y5N5 214 aa3.16□□□□□ -1.9
SMARCE1-215ENST00000578995 NAV3Q8IVL0 2385 aa3.15□□□□□ -1.9
SMARCE1-215ENST00000578995 IGKV1D-17A0A075B6S4 117 aa3.15□□□□□ -1.91
SMARCE1-215ENST00000578995 PNMA8CA0A1B0GUJ8 204 aa3.15□□□□□ -1.91
SMARCE1-215ENST00000578995 A0A1B0GVI7 797 aa3.15□□□□□ -1.91
SMARCE1-215ENST00000578995 PLSCR5A0PG75 271 aa3.15□□□□□ -1.91
SMARCE1-215ENST00000578995 LRP5LA4QPB2 252 aa3.15□□□□□ -1.91
SMARCE1-215ENST00000578995 TMEM210A6NLX4 147 aa3.15□□□□□ -1.91
SMARCE1-215ENST00000578995 ANKRD30BLA7E2S9 258 aa3.15□□□□□ -1.91
SMARCE1-215ENST00000578995 A8MXK9 166 aa3.15□□□□□ -1.91
SMARCE1-215ENST00000578995 ZNF879B4DU55 563 aa3.15□□□□□ -1.91
SMARCE1-215ENST00000578995 ZNF732B4DXR9 585 aa3.15□□□□□ -1.91
SMARCE1-215ENST00000578995 FAM157AC9JC47 383 aa3.15□□□□□ -1.91
SMARCE1-215ENST00000578995 J3QT63 122 aa3.15□□□□□ -1.91
SMARCE1-215ENST00000578995 GABRPO00591 440 aa3.15□□□□□ -1.91
SMARCE1-215ENST00000578995 RGS13O14921 159 aa3.15□□□□□ -1.91
SMARCE1-215ENST00000578995 MYL12BO14950 172 aa3.15□□□□□ -1.91
SMARCE1-215ENST00000578995 SULT1B1O43704 296 aa3.15□□□□□ -1.91
SMARCE1-215ENST00000578995 SYNGR1O43759 233 aa3.15□□□□□ -1.91
SMARCE1-215ENST00000578995 CDC14BO60729 498 aa3.15□□□□□ -1.91
SMARCE1-215ENST00000578995 TNFAIP8O95379 198 aa3.15□□□□□ -1.91
SMARCE1-215ENST00000578995 CYB5R3P00387 301 aaPredicted RBP3.15□□□□□ -1.91
SMARCE1-215ENST00000578995 NRASP01111 189 aa3.15□□□□□ -1.91
SMARCE1-215ENST00000578995 IGHV2-5P01817 119 aa3.15□□□□□ -1.91
SMARCE1-215ENST00000578995 TFF1P04155 84 aa3.15□□□□□ -1.91
SMARCE1-215ENST00000578995 ALDOBP05062 364 aa3.15□□□□□ -1.91
SMARCE1-215ENST00000578995 CSF3P09919 207 aa3.15□□□□□ -1.91
SMARCE1-215ENST00000578995 IGHV4-31P0DP07 118 aa3.15□□□□□ -1.91
SMARCE1-215ENST00000578995 ATF1P18846 271 aa3.15□□□□□ -1.91
SMARCE1-215ENST00000578995 AZGP1P25311 298 aaKnown RBP3.15□□□□□ -1.91
SMARCE1-215ENST00000578995 CD80P33681 288 aa3.15□□□□□ -1.91
SMARCE1-215ENST00000578995 SRP9P49458 86 aaKnown RBP3.15□□□□□ -1.91
SMARCE1-215ENST00000578995 PDLIM4P50479 330 aa3.15□□□□□ -1.91
SMARCE1-215ENST00000578995 GPM6AP51674 278 aa3.15□□□□□ -1.91
SMARCE1-215ENST00000578995 SEC61A1P61619 476 aaKnown RBP3.15□□□□□ -1.91
SMARCE1-215ENST00000578995 GNG3P63215 75 aa3.15□□□□□ -1.91
SMARCE1-215ENST00000578995 QRFPP83859 136 aa3.15□□□□□ -1.91
SMARCE1-215ENST00000578995 SLC3A1Q07837 685 aa3.15□□□□□ -1.91
SMARCE1-215ENST00000578995 LOXL1Q08397 574 aaPredicted RBP3.15□□□□□ -1.91
SMARCE1-215ENST00000578995 IL24Q13007 206 aa3.15□□□□□ -1.91
SMARCE1-215ENST00000578995 MED22Q15528 200 aa3.15□□□□□ -1.91
SMARCE1-215ENST00000578995 OR8G1Q15617 311 aa3.15□□□□□ -1.91
SMARCE1-215ENST00000578995 MOGQ16653 247 aa3.15□□□□□ -1.91
SMARCE1-215ENST00000578995 ZNF404Q494X3 552 aa3.15□□□□□ -1.91
SMARCE1-215ENST00000578995 Q499Y3 187 aa3.15□□□□□ -1.91
SMARCE1-215ENST00000578995 TMEM155Q4W5P6 130 aa3.15□□□□□ -1.91
SMARCE1-215ENST00000578995 YIF1BQ5BJH7 314 aa3.15□□□□□ -1.91
SMARCE1-215ENST00000578995 LIPKQ5VXJ0 399 aa3.15□□□□□ -1.91
SMARCE1-215ENST00000578995 STUMQ69YW2 141 aa3.15□□□□□ -1.91
SMARCE1-215ENST00000578995 LYPD2Q6UXB3 125 aa3.15□□□□□ -1.91
SMARCE1-215ENST00000578995 TMPRSS11AQ6ZMR5 421 aa3.15□□□□□ -1.91
SMARCE1-215ENST00000578995 SLC16A12Q6ZSM3 486 aa3.15□□□□□ -1.91
SMARCE1-215ENST00000578995 C1QL2Q7Z5L3 287 aa3.15□□□□□ -1.91
SMARCE1-215ENST00000578995 BIVMQ86UB2 503 aa3.15□□□□□ -1.91
SMARCE1-215ENST00000578995 MOGAT3Q86VF5 341 aa3.15□□□□□ -1.91
SMARCE1-215ENST00000578995 LRRC28Q86X40 367 aaPredicted RBP3.15□□□□□ -1.91
SMARCE1-215ENST00000578995 FAM90A1Q86YD7 464 aa3.15□□□□□ -1.91
SMARCE1-215ENST00000578995 FGFRL1Q8N441 504 aa3.15□□□□□ -1.91
SMARCE1-215ENST00000578995 ZNF676Q8N7Q3 588 aa3.15□□□□□ -1.91
SMARCE1-215ENST00000578995 SPERTQ8NA61 448 aa3.15□□□□□ -1.91
SMARCE1-215ENST00000578995 POC1AQ8NBT0 407 aa3.15□□□□□ -1.91
SMARCE1-215ENST00000578995 C19orf18Q8NEA5 215 aa3.15□□□□□ -1.91
SMARCE1-215ENST00000578995 OR52N4Q8NGI2 321 aa3.15□□□□□ -1.91
SMARCE1-215ENST00000578995 OR13C9Q8NGT0 318 aa3.15□□□□□ -1.91
SMARCE1-215ENST00000578995 OR10Z1Q8NGY1 313 aa3.15□□□□□ -1.91
SMARCE1-215ENST00000578995 CLDND2Q8NHS1 167 aa3.15□□□□□ -1.91
SMARCE1-215ENST00000578995 GPR148Q8TDV2 347 aa3.15□□□□□ -1.91
SMARCE1-215ENST00000578995 PP6455Q8WZ26 134 aa3.15□□□□□ -1.91
SMARCE1-215ENST00000578995 PIGCQ92535 297 aa3.15□□□□□ -1.91
SMARCE1-215ENST00000578995 RPL3LQ92901 407 aaKnown RBP3.15□□□□□ -1.91
SMARCE1-215ENST00000578995 ERGIC1Q969X5 290 aa3.15□□□□□ -1.91
SMARCE1-215ENST00000578995 TMEM106AQ96A25 262 aa3.15□□□□□ -1.91
SMARCE1-215ENST00000578995 SLC25A28Q96A46 364 aa3.15□□□□□ -1.91
SMARCE1-215ENST00000578995 SPSB1Q96BD6 273 aa3.15□□□□□ -1.91
SMARCE1-215ENST00000578995 MRPL48Q96GC5 212 aaKnown RBP3.15□□□□□ -1.91
SMARCE1-215ENST00000578995 ZNF488Q96MN9 340 aa3.15□□□□□ -1.91
SMARCE1-215ENST00000578995 NR1H4Q96RI1 486 aaPredicted RBP3.15□□□□□ -1.91
SMARCE1-215ENST00000578995 NKX3-1Q99801 234 aaPredicted RBP3.15□□□□□ -1.91
SMARCE1-215ENST00000578995 NRIP2Q9BQI9 281 aa3.15□□□□□ -1.91
SMARCE1-215ENST00000578995 RTL8AQ9BWD3 113 aa3.15□□□□□ -1.91
SMARCE1-215ENST00000578995 PAPOLGQ9BWT3 736 aaKnown RBP3.15□□□□□ -1.91
SMARCE1-215ENST00000578995 PKIBQ9C010 78 aa3.15□□□□□ -1.91
SMARCE1-215ENST00000578995 WDR13Q9H1Z4 485 aa3.15□□□□□ -1.91
SMARCE1-215ENST00000578995 Q9H521 79 aa3.15□□□□□ -1.91
SMARCE1-215ENST00000578995 TMEM165Q9HC07 324 aa3.15□□□□□ -1.91
SMARCE1-215ENST00000578995 SMURF1Q9HCE7 757 aa3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms