RNA–Protein interactions for RNA: ENST00000578501.5

CSNK1D-208, Transcript of casein kinase 1 delta, human

TSL 2

Gene CSNK1D, Length 1,124 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CSNK1D-208	ENST00000578501	RBMS3	Q6XE24	437 aa	Known RBP	11.26	□□□□□ -0.61
CSNK1D-208	ENST00000578501	ANGPTL5	Q86XS5	388 aa		11.26	□□□□□ -0.61
CSNK1D-208	ENST00000578501	FGFRL1	Q8N441	504 aa		11.26	□□□□□ -0.61
CSNK1D-208	ENST00000578501	ZNF561	Q8N587	486 aa		11.26	□□□□□ -0.61
CSNK1D-208	ENST00000578501	KIR3DL3	Q8N743	410 aa		11.26	□□□□□ -0.61
CSNK1D-208	ENST00000578501	ZNF676	Q8N7Q3	588 aa		11.26	□□□□□ -0.61
CSNK1D-208	ENST00000578501	TRMT10A	Q8TBZ6	339 aa	Known RBP	11.26	□□□□□ -0.61
CSNK1D-208	ENST00000578501	FAM216A	Q8WUB2	273 aa		11.26	□□□□□ -0.61
CSNK1D-208	ENST00000578501	C22orf15	Q8WYQ4	148 aa		11.26	□□□□□ -0.61
CSNK1D-208	ENST00000578501	SPSB1	Q96BD6	273 aa		11.26	□□□□□ -0.61
CSNK1D-208	ENST00000578501	FGGY	Q96C11	551 aa		11.26	□□□□□ -0.61
CSNK1D-208	ENST00000578501	DCTN5	Q9BTE1	182 aa		11.26	□□□□□ -0.61
CSNK1D-208	ENST00000578501	SIRPD	Q9H106	197 aa		11.26	□□□□□ -0.61
CSNK1D-208	ENST00000578501	DIMT1	Q9UNQ2	313 aa	Known RBP	11.26	□□□□□ -0.61
CSNK1D-208	ENST00000578501	CAB39	Q9Y376	341 aa	Predicted RBP	11.26	□□□□□ -0.61
CSNK1D-208	ENST00000578501	MAB21L2	Q9Y586	359 aa		11.26	□□□□□ -0.61
CSNK1D-208	ENST00000578501	IGKV1-27	A0A075B6S5	117 aa		11.25	□□□□□ -0.61
CSNK1D-208	ENST00000578501	IGKV1-9	A0A0C4DH69	117 aa		11.25	□□□□□ -0.61
CSNK1D-208	ENST00000578501	RFPL4A	A6NLU0	287 aa		11.25	□□□□□ -0.61
CSNK1D-208	ENST00000578501		E9PI62	339 aa		11.25	□□□□□ -0.61
CSNK1D-208	ENST00000578501	RFPL4AL1	F8VTS6	287 aa		11.25	□□□□□ -0.61
CSNK1D-208	ENST00000578501	TRIM77	I1YAP6	450 aa		11.25	□□□□□ -0.61
CSNK1D-208	ENST00000578501	ALX3	O95076	343 aa		11.25	□□□□□ -0.61
CSNK1D-208	ENST00000578501	NXPH2	O95156	264 aa		11.25	□□□□□ -0.61
CSNK1D-208	ENST00000578501	ZFPL1	O95159	310 aa		11.25	□□□□□ -0.61
CSNK1D-208	ENST00000578501	KNG1	P01042	644 aa		11.25	□□□□□ -0.61
CSNK1D-208	ENST00000578501	SFTPB	P07988	381 aa		11.25	□□□□□ -0.61
CSNK1D-208	ENST00000578501	SELL	P14151	372 aa		11.25	□□□□□ -0.61
CSNK1D-208	ENST00000578501	ZNF20	P17024	532 aa		11.25	□□□□□ -0.61
CSNK1D-208	ENST00000578501	ATF1	P18846	271 aa		11.25	□□□□□ -0.61
CSNK1D-208	ENST00000578501	PRDX2	P32119	198 aa		11.25	□□□□□ -0.61
CSNK1D-208	ENST00000578501	SLC34A1	Q06495	639 aa		11.25	□□□□□ -0.61
CSNK1D-208	ENST00000578501	GPR157	Q5UAW9	335 aa		11.25	□□□□□ -0.61
CSNK1D-208	ENST00000578501	TMPRSS11A	Q6ZMR5	421 aa		11.25	□□□□□ -0.61
CSNK1D-208	ENST00000578501	C1orf122	Q6ZSJ8	110 aa		11.25	□□□□□ -0.61
CSNK1D-208	ENST00000578501	C8orf59	Q8N0T1	100 aa	Predicted RBP	11.25	□□□□□ -0.61
CSNK1D-208	ENST00000578501	BCL6B	Q8N143	479 aa	Predicted RBP	11.25	□□□□□ -0.61
CSNK1D-208	ENST00000578501	SIGLECL1	Q8N7X8	197 aa		11.25	□□□□□ -0.61
CSNK1D-208	ENST00000578501	OR51A4	Q8NGJ6	313 aa		11.25	□□□□□ -0.61
CSNK1D-208	ENST00000578501	OR13C3	Q8NGS6	347 aa		11.25	□□□□□ -0.61
CSNK1D-208	ENST00000578501	RPS4Y2	Q8TD47	263 aa		11.25	□□□□□ -0.61
CSNK1D-208	ENST00000578501	NPRL2	Q8WTW4	380 aa		11.25	□□□□□ -0.61
CSNK1D-208	ENST00000578501	FBLIM1	Q8WUP2	373 aa		11.25	□□□□□ -0.61
CSNK1D-208	ENST00000578501	BORCS8	Q96FH0	119 aa		11.25	□□□□□ -0.61
CSNK1D-208	ENST00000578501	ZNF488	Q96MN9	340 aa		11.25	□□□□□ -0.61
CSNK1D-208	ENST00000578501	TBX15	Q96SF7	602 aa		11.25	□□□□□ -0.61
CSNK1D-208	ENST00000578501	PCGF1	Q9BSM1	259 aa		11.25	□□□□□ -0.61
CSNK1D-208	ENST00000578501	COMMD4	Q9H0A8	199 aa		11.25	□□□□□ -0.61
CSNK1D-208	ENST00000578501	SEBOX	Q9HB31	216 aa	Predicted RBP	11.25	□□□□□ -0.61
CSNK1D-208	ENST00000578501	EXOSC1	Q9Y3B2	195 aa	Known RBP	11.25	□□□□□ -0.61
CSNK1D-208	ENST00000578501	TRBV23-1	A0A0A0MS06	115 aa		11.24	□□□□□ -0.61
CSNK1D-208	ENST00000578501	TRBV2	A0A0J9YWF9	115 aa		11.24	□□□□□ -0.61
CSNK1D-208	ENST00000578501	RGS9	O75916	674 aa	Predicted RBP	11.24	□□□□□ -0.61
CSNK1D-208	ENST00000578501	GNAO1	P09471	354 aa		11.24	□□□□□ -0.61
CSNK1D-208	ENST00000578501	PIP	P12273	146 aa	Predicted RBP	11.24	□□□□□ -0.61
CSNK1D-208	ENST00000578501	MYL12A	P19105	171 aa		11.24	□□□□□ -0.61
CSNK1D-208	ENST00000578501	ETV1	P50549	477 aa		11.24	□□□□□ -0.61
CSNK1D-208	ENST00000578501	ATP1B3	P54709	279 aa		11.24	□□□□□ -0.61
CSNK1D-208	ENST00000578501	ARF6	P62330	175 aa		11.24	□□□□□ -0.61
CSNK1D-208	ENST00000578501	ACTG1	P63261	375 aa		11.24	□□□□□ -0.61
CSNK1D-208	ENST00000578501	PDLIM3	Q53GG5	364 aa	Predicted RBP	11.24	□□□□□ -0.61
CSNK1D-208	ENST00000578501	RPL22L1	Q6P5R6	122 aa	Known RBP	11.24	□□□□□ -0.61
CSNK1D-208	ENST00000578501	METAP1D	Q6UB28	335 aa	Predicted RBP	11.24	□□□□□ -0.61
CSNK1D-208	ENST00000578501	LHFPL2	Q6ZUX7	228 aa		11.24	□□□□□ -0.61
CSNK1D-208	ENST00000578501		Q8IYB0	196 aa		11.24	□□□□□ -0.61
CSNK1D-208	ENST00000578501	CMTM4	Q8IZR5	234 aa		11.24	□□□□□ -0.61
CSNK1D-208	ENST00000578501	PARP16	Q8N5Y8	322 aa		11.24	□□□□□ -0.61
CSNK1D-208	ENST00000578501	CD177	Q8N6Q3	437 aa		11.24	□□□□□ -0.61
CSNK1D-208	ENST00000578501	ZDHHC22	Q8N966	263 aa		11.24	□□□□□ -0.61
CSNK1D-208	ENST00000578501	ZNRF1	Q8ND25	227 aa		11.24	□□□□□ -0.61
CSNK1D-208	ENST00000578501	OR10AC1	Q8NH08	325 aa		11.24	□□□□□ -0.61
CSNK1D-208	ENST00000578501	OR5AK2	Q8NH90	309 aa		11.24	□□□□□ -0.61
CSNK1D-208	ENST00000578501	TFAP2C	Q92754	450 aa		11.24	□□□□□ -0.61
CSNK1D-208	ENST00000578501	TMEM80	Q96HE8	168 aa		11.24	□□□□□ -0.61
CSNK1D-208	ENST00000578501	CEP19	Q96LK0	163 aa		11.24	□□□□□ -0.61
CSNK1D-208	ENST00000578501	PRDM13	Q9H4Q3	707 aa		11.24	□□□□□ -0.61
CSNK1D-208	ENST00000578501	ZMAT3	Q9HA38	289 aa	Known RBP	11.24	□□□□□ -0.61
CSNK1D-208	ENST00000578501	NEK6	Q9HC98	313 aa		11.24	□□□□□ -0.61
CSNK1D-208	ENST00000578501	ESM1	Q9NQ30	184 aa		11.24	□□□□□ -0.61
CSNK1D-208	ENST00000578501	PLCXD1	Q9NUJ7	323 aa		11.24	□□□□□ -0.61
CSNK1D-208	ENST00000578501	MTCH1	Q9NZJ7	389 aa		11.24	□□□□□ -0.61
CSNK1D-208	ENST00000578501	CNOT2	Q9NZN8	540 aa	Known RBP	11.24	□□□□□ -0.61
CSNK1D-208	ENST00000578501	NKX1-2	Q9UD57	310 aa	Predicted RBP	11.24	□□□□□ -0.61
CSNK1D-208	ENST00000578501	IGHV3OR16-10	A0A075B7F0	116 aa		11.23	□□□□□ -0.61
CSNK1D-208	ENST00000578501	CENPVL3	A0A0U1RRI6	287 aa		11.23	□□□□□ -0.61
CSNK1D-208	ENST00000578501		H0YJX3	145 aa		11.23	□□□□□ -0.61
CSNK1D-208	ENST00000578501	CLDN34	H7C241	214 aa		11.23	□□□□□ -0.61
CSNK1D-208	ENST00000578501	SLC1A7	O00341	560 aa		11.23	□□□□□ -0.61
CSNK1D-208	ENST00000578501	TFF1	P04155	84 aa		11.23	□□□□□ -0.61
CSNK1D-208	ENST00000578501	NDUFB7	P17568	137 aa		11.23	□□□□□ -0.61
CSNK1D-208	ENST00000578501	AZGP1	P25311	298 aa	Known RBP	11.23	□□□□□ -0.61
CSNK1D-208	ENST00000578501	MTCP1	P56278	107 aa		11.23	□□□□□ -0.61
CSNK1D-208	ENST00000578501	MED21	Q13503	144 aa		11.23	□□□□□ -0.61
CSNK1D-208	ENST00000578501	LAIR2	Q6ISS4	152 aa		11.23	□□□□□ -0.61
CSNK1D-208	ENST00000578501	SLC25A26	Q70HW3	274 aa		11.23	□□□□□ -0.61
CSNK1D-208	ENST00000578501	SERPINA12	Q8IW75	414 aa		11.23	□□□□□ -0.61
CSNK1D-208	ENST00000578501	MKX	Q8IYA7	352 aa		11.23	□□□□□ -0.61
CSNK1D-208	ENST00000578501	OR5D14	Q8NGL3	314 aa		11.23	□□□□□ -0.61
CSNK1D-208	ENST00000578501	OR52N1	Q8NH53	320 aa		11.23	□□□□□ -0.61
CSNK1D-208	ENST00000578501	GATAD2B	Q8WXI9	593 aa		11.23	□□□□□ -0.61

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