RNA–Protein interactions for RNA: ENST00000577664.5

CDK5RAP3-204, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 568 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-204ENST00000577664 LDLRAD4O15165 306 aa9.38□□□□□ -0.91
CDK5RAP3-204ENST00000577664 ZNF780AO75290 641 aaPredicted RBP9.38□□□□□ -0.91
CDK5RAP3-204ENST00000577664 HCKP08631 526 aa9.38□□□□□ -0.91
CDK5RAP3-204ENST00000577664 UBBP0CG47 229 aa9.38□□□□□ -0.91
CDK5RAP3-204ENST00000577664 PMELP40967 661 aa9.38□□□□□ -0.91
CDK5RAP3-204ENST00000577664 HAAOP46952 286 aa9.38□□□□□ -0.91
CDK5RAP3-204ENST00000577664 EFNA4P52798 201 aa9.38□□□□□ -0.91
CDK5RAP3-204ENST00000577664 CCL8P80075 99 aa9.38□□□□□ -0.91
CDK5RAP3-204ENST00000577664 QRFPP83859 136 aa9.38□□□□□ -0.91
CDK5RAP3-204ENST00000577664 MPPED2Q15777 294 aa9.38□□□□□ -0.91
CDK5RAP3-204ENST00000577664 SPRNQ5BIV9 151 aa9.38□□□□□ -0.91
CDK5RAP3-204ENST00000577664 ANGPTL5Q86XS5 388 aa9.38□□□□□ -0.91
CDK5RAP3-204ENST00000577664 MKXQ8IYA7 352 aa9.38□□□□□ -0.91
CDK5RAP3-204ENST00000577664 PNLDC1Q8NA58 520 aaKnown RBP9.38□□□□□ -0.91
CDK5RAP3-204ENST00000577664 OR6M1Q8NGM8 313 aa9.38□□□□□ -0.91
CDK5RAP3-204ENST00000577664 ZNF671Q8TAW3 534 aa9.38□□□□□ -0.91
CDK5RAP3-204ENST00000577664 TBC1D15Q8TC07 691 aa9.38□□□□□ -0.91
CDK5RAP3-204ENST00000577664 ITLN1Q8WWA0 313 aa9.38□□□□□ -0.91
CDK5RAP3-204ENST00000577664 PTX4Q96A99 478 aa9.38□□□□□ -0.91
CDK5RAP3-204ENST00000577664 KCTD12Q96CX2 325 aaKnown RBP9.38□□□□□ -0.91
CDK5RAP3-204ENST00000577664 MRPS24Q96EL2 167 aaKnown RBP9.38□□□□□ -0.91
CDK5RAP3-204ENST00000577664 BARHL1Q9BZE3 327 aa9.38□□□□□ -0.91
CDK5RAP3-204ENST00000577664 GSX2Q9BZM3 304 aa9.38□□□□□ -0.91
CDK5RAP3-204ENST00000577664 CXorf56Q9H5V9 222 aa9.38□□□□□ -0.91
CDK5RAP3-204ENST00000577664 FN3KRPQ9HA64 309 aa9.38□□□□□ -0.91
CDK5RAP3-204ENST00000577664 HES4Q9HCC6 221 aa9.38□□□□□ -0.91
CDK5RAP3-204ENST00000577664 DECR2Q9NUI1 292 aa9.38□□□□□ -0.91
CDK5RAP3-204ENST00000577664 RASL12Q9NYN1 266 aa9.38□□□□□ -0.91
CDK5RAP3-204ENST00000577664 STEAP1Q9UHE8 339 aa9.38□□□□□ -0.91
CDK5RAP3-204ENST00000577664 POLDIP2Q9Y2S7 368 aa9.38□□□□□ -0.91
CDK5RAP3-204ENST00000577664 CDIPTO14735 213 aa9.37□□□□□ -0.91
CDK5RAP3-204ENST00000577664 NOL3O60936 208 aaKnown RBP9.37□□□□□ -0.91
CDK5RAP3-204ENST00000577664 NCR1O76036 304 aa9.37□□□□□ -0.91
CDK5RAP3-204ENST00000577664 KDM4BO94953 1096 aa9.37□□□□□ -0.91
CDK5RAP3-204ENST00000577664 HPXP02790 462 aa9.37□□□□□ -0.91
CDK5RAP3-204ENST00000577664 CLEC2LP0C7M8 214 aa9.37□□□□□ -0.91
CDK5RAP3-204ENST00000577664 OCMP0CE72 109 aaPredicted RBP9.37□□□□□ -0.91
CDK5RAP3-204ENST00000577664 PGA5P0DJD9 388 aa9.37□□□□□ -0.91
CDK5RAP3-204ENST00000577664 CALCBP10092 127 aa9.37□□□□□ -0.91
CDK5RAP3-204ENST00000577664 HTR2CP28335 458 aa9.37□□□□□ -0.91
CDK5RAP3-204ENST00000577664 SERPINB10P48595 397 aa9.37□□□□□ -0.91
CDK5RAP3-204ENST00000577664 RORCP51449 518 aa9.37□□□□□ -0.91
CDK5RAP3-204ENST00000577664 OR10A3P58181 314 aa9.37□□□□□ -0.91
CDK5RAP3-204ENST00000577664 GPR176Q14439 515 aa9.37□□□□□ -0.91
CDK5RAP3-204ENST00000577664 DMRTC1Q5HYR2 192 aa9.37□□□□□ -0.91
CDK5RAP3-204ENST00000577664 SFXN4Q6P4A7 337 aa9.37□□□□□ -0.91
CDK5RAP3-204ENST00000577664 WDR82Q6UXN9 313 aa9.37□□□□□ -0.91
CDK5RAP3-204ENST00000577664 C1QL2Q7Z5L3 287 aa9.37□□□□□ -0.91
CDK5RAP3-204ENST00000577664 FAM90A1Q86YD7 464 aa9.37□□□□□ -0.91
CDK5RAP3-204ENST00000577664 Q8IYB0 196 aa9.37□□□□□ -0.91
CDK5RAP3-204ENST00000577664 OR4D6Q8NGJ1 314 aa9.37□□□□□ -0.91
CDK5RAP3-204ENST00000577664 NDNFQ8TB73 568 aa9.37□□□□□ -0.91
CDK5RAP3-204ENST00000577664 TRMT10AQ8TBZ6 339 aaKnown RBP9.37□□□□□ -0.91
CDK5RAP3-204ENST00000577664 RDH5Q92781 318 aa9.37□□□□□ -0.91
CDK5RAP3-204ENST00000577664 DVL3Q92997 716 aaPredicted RBP9.37□□□□□ -0.91
CDK5RAP3-204ENST00000577664 CMTM3Q96MX0 182 aa9.37□□□□□ -0.91
CDK5RAP3-204ENST00000577664 CCL19Q99731 98 aa9.37□□□□□ -0.91
CDK5RAP3-204ENST00000577664 NRIP2Q9BQI9 281 aa9.37□□□□□ -0.91
CDK5RAP3-204ENST00000577664 NXF2Q9GZY0 626 aaKnown RBP9.37□□□□□ -0.91
CDK5RAP3-204ENST00000577664 SAP30LQ9HAJ7 183 aa9.37□□□□□ -0.91
CDK5RAP3-204ENST00000577664 MYOZ1Q9NP98 299 aaPredicted RBP9.37□□□□□ -0.91
CDK5RAP3-204ENST00000577664 PCDHB16Q9NRJ7 776 aa9.37□□□□□ -0.91
CDK5RAP3-204ENST00000577664 MTCH1Q9NZJ7 389 aa9.37□□□□□ -0.91
CDK5RAP3-204ENST00000577664 ABRACLQ9P1F3 81 aa9.37□□□□□ -0.91
CDK5RAP3-204ENST00000577664 PPP1R3CQ9UQK1 317 aa9.37□□□□□ -0.91
CDK5RAP3-204ENST00000577664 A3GALT2U3KPV4 340 aa9.37□□□□□ -0.91
CDK5RAP3-204ENST00000577664 IGKV1-12A0A0C4DH73 117 aa9.36□□□□□ -0.91
CDK5RAP3-204ENST00000577664 IGHV1-69-2A0A0G2JMI3 117 aa9.36□□□□□ -0.91
CDK5RAP3-204ENST00000577664 SRRM5B3KS81 715 aa9.36□□□□□ -0.91
CDK5RAP3-204ENST00000577664 RP2O75695 350 aa9.36□□□□□ -0.91
CDK5RAP3-204ENST00000577664 BPNT1O95861 308 aa9.36□□□□□ -0.91
CDK5RAP3-204ENST00000577664 IGKV1D-12P01611 117 aa9.36□□□□□ -0.91
CDK5RAP3-204ENST00000577664 GRPP07492 148 aa9.36□□□□□ -0.91
CDK5RAP3-204ENST00000577664 ZNF182P17025 639 aaPredicted RBP9.36□□□□□ -0.91
CDK5RAP3-204ENST00000577664 BMXP51813 675 aa9.36□□□□□ -0.91
CDK5RAP3-204ENST00000577664 TMEM33P57088 247 aa9.36□□□□□ -0.91
CDK5RAP3-204ENST00000577664 NHLRC3Q5JS37 347 aa9.36□□□□□ -0.91
CDK5RAP3-204ENST00000577664 HAGHLQ6PII5 290 aaPredicted RBP9.36□□□□□ -0.91
CDK5RAP3-204ENST00000577664 DNM1P46Q6ZS02 220 aa9.36□□□□□ -0.91
CDK5RAP3-204ENST00000577664 OR2W3Q7Z3T1 314 aa9.36□□□□□ -0.91
CDK5RAP3-204ENST00000577664 POC1AQ8NBT0 407 aa9.36□□□□□ -0.91
CDK5RAP3-204ENST00000577664 OR51T1Q8NGJ9 327 aa9.36□□□□□ -0.91
CDK5RAP3-204ENST00000577664 OR51F2Q8NH61 342 aa9.36□□□□□ -0.91
CDK5RAP3-204ENST00000577664 ACOT12Q8WYK0 555 aa9.36□□□□□ -0.91
CDK5RAP3-204ENST00000577664 HPS1Q92902 700 aa9.36□□□□□ -0.91
CDK5RAP3-204ENST00000577664 SPACA5Q96QH8 159 aa9.36□□□□□ -0.91
CDK5RAP3-204ENST00000577664 VRK1Q99986 396 aaPredicted RBP9.36□□□□□ -0.91
CDK5RAP3-204ENST00000577664 C19orf24Q9BVV8 132 aa9.36□□□□□ -0.91
CDK5RAP3-204ENST00000577664 SLIRPQ9GZT3 109 aaKnown RBP9.36□□□□□ -0.91
CDK5RAP3-204ENST00000577664 CCDC59Q9P031 241 aaKnown RBP9.36□□□□□ -0.91
CDK5RAP3-204ENST00000577664 RNF7Q9UBF6 113 aa9.36□□□□□ -0.91
CDK5RAP3-204ENST00000577664 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.36□□□□□ -0.914e-7■■□□□ 13.8
CDK5RAP3-204ENST00000577664 A0A075B6Q4 140 aa9.35□□□□□ -0.91
CDK5RAP3-204ENST00000577664 TMEM14DPA8MWL7 114 aa9.35□□□□□ -0.91
CDK5RAP3-204ENST00000577664 TMEM178BH3BS89 294 aa9.35□□□□□ -0.91
CDK5RAP3-204ENST00000577664 TNFRSF13BO14836 293 aaPredicted RBP9.35□□□□□ -0.91
CDK5RAP3-204ENST00000577664 AKR7A2O43488 359 aa9.35□□□□□ -0.91
CDK5RAP3-204ENST00000577664 SYNGR1O43759 233 aa9.35□□□□□ -0.91
CDK5RAP3-204ENST00000577664 RHBDL1O75783 438 aa9.35□□□□□ -0.91
CDK5RAP3-204ENST00000577664 COL8A2P25067 703 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms