RNA–Protein interactions for RNA: ENST00000577541.1

TOP2A-202, Transcript of DNA topoisomerase II alpha, humanhuman

TSL 2

Gene TOP2A, Length 420 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-202ENST00000577541 FRMD8P1Q9BZ68 369 aaPredicted RBP0.9□□□□□ -2.27
TOP2A-202ENST00000577541 TM6SF2Q9BZW4 377 aa0.9□□□□□ -2.27
TOP2A-202ENST00000577541 TOLLIPQ9H0E2 274 aa0.9□□□□□ -2.27
TOP2A-202ENST00000577541 AGPAT3Q9NRZ7 376 aa0.9□□□□□ -2.27
TOP2A-202ENST00000577541 RMND1Q9NWS8 449 aa0.9□□□□□ -2.27
TOP2A-202ENST00000577541 FLVCR2Q9UPI3 526 aa0.9□□□□□ -2.27
TOP2A-202ENST00000577541 ORC6Q9Y5N6 252 aa0.9□□□□□ -2.27
TOP2A-202ENST00000577541 ENPP4Q9Y6X5 453 aa0.9□□□□□ -2.27
TOP2A-202ENST00000577541 SYNRGQ9UMZ2 1314 aa0.89□□□□□ -2.27
TOP2A-202ENST00000577541 TICRRQ7Z2Z1 1910 aa0.89□□□□□ -2.27
TOP2A-202ENST00000577541 C2orf16Q68DN1 1984 aa0.89□□□□□ -2.27
TOP2A-202ENST00000577541 SHROOM3Q8TF72 1996 aa0.89□□□□□ -2.27
TOP2A-202ENST00000577541 BAZ1BQ9UIG0 1483 aaKnown RBP0.89□□□□□ -2.27
TOP2A-202ENST00000577541 IGKV2-24A0A0C4DH68 120 aa0.89□□□□□ -2.27
TOP2A-202ENST00000577541 ISPDA4D126 451 aa0.89□□□□□ -2.27
TOP2A-202ENST00000577541 ZNF98A6NK75 572 aa0.89□□□□□ -2.27
TOP2A-202ENST00000577541 CENPXA8MT69 81 aa0.89□□□□□ -2.27
TOP2A-202ENST00000577541 NDUFS8O00217 210 aa0.89□□□□□ -2.27
TOP2A-202ENST00000577541 RNF113AO15541 343 aaKnown RBP0.89□□□□□ -2.27
TOP2A-202ENST00000577541 SHOX2O60902 331 aaPredicted RBP0.89□□□□□ -2.27
TOP2A-202ENST00000577541 NDUFS6O75380 124 aaKnown RBP0.89□□□□□ -2.27
TOP2A-202ENST00000577541 ZMPSTE24O75844 475 aa0.89□□□□□ -2.27
TOP2A-202ENST00000577541 PTHP01270 115 aa0.89□□□□□ -2.27
TOP2A-202ENST00000577541 MMP7P09237 267 aaPredicted RBP0.89□□□□□ -2.27
TOP2A-202ENST00000577541 OR5AC1P0C628 307 aa0.89□□□□□ -2.27
TOP2A-202ENST00000577541 IL1RNP18510 177 aa0.89□□□□□ -2.27
TOP2A-202ENST00000577541 TAC1P20366 129 aa0.89□□□□□ -2.27
TOP2A-202ENST00000577541 TEAD1P28347 426 aa0.89□□□□□ -2.27
TOP2A-202ENST00000577541 COILP38432 576 aaPredicted RBP0.89□□□□□ -2.27
TOP2A-202ENST00000577541 HADHBP55084 474 aaKnown RBP0.89□□□□□ -2.27
TOP2A-202ENST00000577541 OR10A3P58181 314 aa0.89□□□□□ -2.27
TOP2A-202ENST00000577541 MEF2CQ06413 473 aaPredicted RBP0.89□□□□□ -2.27
TOP2A-202ENST00000577541 PIGHQ14442 188 aaPredicted RBP0.89□□□□□ -2.27
TOP2A-202ENST00000577541 PMVKQ15126 192 aa0.89□□□□□ -2.27
TOP2A-202ENST00000577541 SLC9A3R2Q15599 337 aa0.89□□□□□ -2.27
TOP2A-202ENST00000577541 C18orf21Q32NC0 220 aaPredicted RBP0.89□□□□□ -2.27
TOP2A-202ENST00000577541 KCTD16Q68DU8 428 aa0.89□□□□□ -2.27
TOP2A-202ENST00000577541 FAHD1Q6P587 224 aa0.89□□□□□ -2.27
TOP2A-202ENST00000577541 PRSS54Q6PEW0 395 aa0.89□□□□□ -2.27
TOP2A-202ENST00000577541 DAZ4Q86SG3 579 aaKnown RBP0.89□□□□□ -2.27
TOP2A-202ENST00000577541 ERO1BQ86YB8 467 aa0.89□□□□□ -2.27
TOP2A-202ENST00000577541 FAM58AQ8N1B3 248 aa0.89□□□□□ -2.27
TOP2A-202ENST00000577541 CYP4Z2PQ8N1L4 340 aa0.89□□□□□ -2.27
TOP2A-202ENST00000577541 ZNF555Q8NEP9 628 aa0.89□□□□□ -2.27
TOP2A-202ENST00000577541 OR13C9Q8NGT0 318 aa0.89□□□□□ -2.27
TOP2A-202ENST00000577541 ENKURQ8TC29 256 aa0.89□□□□□ -2.27
TOP2A-202ENST00000577541 ING5Q8WYH8 240 aa0.89□□□□□ -2.27
TOP2A-202ENST00000577541 CCL17Q92583 94 aa0.89□□□□□ -2.27
TOP2A-202ENST00000577541 RBPMSQ93062 196 aaKnown RBP0.89□□□□□ -2.27
TOP2A-202ENST00000577541 FAM131CQ96AQ9 280 aa0.89□□□□□ -2.27
TOP2A-202ENST00000577541 SMIM8Q96KF7 97 aa0.89□□□□□ -2.27
TOP2A-202ENST00000577541 METTL26Q96S19 204 aa0.89□□□□□ -2.27
TOP2A-202ENST00000577541 TSNAXQ99598 290 aaKnown RBP0.89□□□□□ -2.27
TOP2A-202ENST00000577541 SIKE1Q9BRV8 207 aa0.89□□□□□ -2.27
TOP2A-202ENST00000577541 SHANK2-AS3Q9BTD1 123 aa0.89□□□□□ -2.27
TOP2A-202ENST00000577541 EMC6Q9BV81 110 aa0.89□□□□□ -2.27
TOP2A-202ENST00000577541 TMED9Q9BVK6 235 aa0.89□□□□□ -2.27
TOP2A-202ENST00000577541 SHCBP1LQ9BZQ2 653 aa0.89□□□□□ -2.27
TOP2A-202ENST00000577541 RAB1BQ9H0U4 201 aa0.89□□□□□ -2.27
TOP2A-202ENST00000577541 SYT4Q9H2B2 425 aa0.89□□□□□ -2.27
TOP2A-202ENST00000577541 SLC38A1Q9H2H9 487 aa0.89□□□□□ -2.27
TOP2A-202ENST00000577541 PLEKHA1Q9HB21 404 aa0.89□□□□□ -2.27
TOP2A-202ENST00000577541 CSNK1G1Q9HCP0 422 aa0.89□□□□□ -2.27
TOP2A-202ENST00000577541 FAM60AQ9NP50 221 aa0.89□□□□□ -2.27
TOP2A-202ENST00000577541 ACOT13Q9NPJ3 140 aa0.89□□□□□ -2.27
TOP2A-202ENST00000577541 C12orf4Q9NQ89 552 aa0.89□□□□□ -2.27
TOP2A-202ENST00000577541 DAZ1Q9NQZ3 744 aaKnown RBP0.89□□□□□ -2.27
TOP2A-202ENST00000577541 ZNF302Q9NR11 478 aa0.89□□□□□ -2.27
TOP2A-202ENST00000577541 MRM2Q9UI43 246 aaKnown RBP0.89□□□□□ -2.27
TOP2A-202ENST00000577541 ZNF230Q9UIE0 474 aaPredicted RBP0.89□□□□□ -2.27
TOP2A-202ENST00000577541 ENPP5Q9UJA9 477 aa0.89□□□□□ -2.27
TOP2A-202ENST00000577541 ZNF391Q9UJN7 358 aa0.89□□□□□ -2.27
TOP2A-202ENST00000577541 RAB22AQ9UL26 194 aa0.89□□□□□ -2.27
TOP2A-202ENST00000577541 ACOT9Q9Y305 439 aa0.89□□□□□ -2.27
TOP2A-202ENST00000577541 MMACHCQ9Y4U1 282 aa0.89□□□□□ -2.27
TOP2A-202ENST00000577541 BZW2Q9Y6E2 419 aaKnown RBP0.89□□□□□ -2.27
TOP2A-202ENST00000577541 SVILO95425 2214 aa0.89□□□□□ -2.27
TOP2A-202ENST00000577541 SEC16AO15027 2179 aa0.89□□□□□ -2.27
TOP2A-202ENST00000577541 TMEM131Q92545 1883 aa0.88□□□□□ -2.27
TOP2A-202ENST00000577541 GSTTP1A0A1W2PQM5 241 aa0.88□□□□□ -2.27
TOP2A-202ENST00000577541 IZUMO1RA6ND01 250 aa0.88□□□□□ -2.27
TOP2A-202ENST00000577541 RBFOX3A6NFN3 312 aa0.88□□□□□ -2.27
TOP2A-202ENST00000577541 MGAT4DA6NG13 374 aa0.88□□□□□ -2.27
TOP2A-202ENST00000577541 PRAMEF26H0Y7S4 382 aa0.88□□□□□ -2.27
TOP2A-202ENST00000577541 MFNGO00587 321 aa0.88□□□□□ -2.27
TOP2A-202ENST00000577541 PRMT5O14744 637 aaPredicted RBP0.88□□□□□ -2.27
TOP2A-202ENST00000577541 OR7C2O60412 319 aa0.88□□□□□ -2.27
TOP2A-202ENST00000577541 DEDDO75618 318 aa0.88□□□□□ -2.27
TOP2A-202ENST00000577541 UPK1BO75841 260 aa0.88□□□□□ -2.27
TOP2A-202ENST00000577541 TRGV3P03979 118 aa0.88□□□□□ -2.27
TOP2A-202ENST00000577541 RLN2P04090 185 aa0.88□□□□□ -2.27
TOP2A-202ENST00000577541 OR5AL1P0C617 328 aa0.88□□□□□ -2.27
TOP2A-202ENST00000577541 CCL2P13500 99 aa0.88□□□□□ -2.27
TOP2A-202ENST00000577541 ZNF35P13682 527 aa0.88□□□□□ -2.27
TOP2A-202ENST00000577541 HOXB8P17481 243 aaPredicted RBP0.88□□□□□ -2.27
TOP2A-202ENST00000577541 MAGEA3P43357 314 aa0.88□□□□□ -2.27
TOP2A-202ENST00000577541 TGM4P49221 684 aa0.88□□□□□ -2.27
TOP2A-202ENST00000577541 RGS6P49758 472 aa0.88□□□□□ -2.27
TOP2A-202ENST00000577541 ETV1P50549 477 aa0.88□□□□□ -2.27
TOP2A-202ENST00000577541 TMEM241Q24JQ0 296 aa0.88□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms