RNA–Protein interactions for RNA: ENST00000577435.5

GGA3-203, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-203ENST00000577435 TRAV40A0A0B4J280 105 aa11.52□□□□□ -0.57
GGA3-203ENST00000577435 IGKV1-9A0A0C4DH69 117 aa11.52□□□□□ -0.57
GGA3-203ENST00000577435 E9PI62 339 aa11.52□□□□□ -0.57
GGA3-203ENST00000577435 TRIM77I1YAP6 450 aa11.52□□□□□ -0.57
GGA3-203ENST00000577435 ZFPL1O95159 310 aa11.52□□□□□ -0.57
GGA3-203ENST00000577435 MT-ND2P03891 347 aa11.52□□□□□ -0.57
GGA3-203ENST00000577435 CCDC159P0C7I6 412 aa11.52□□□□□ -0.57
GGA3-203ENST00000577435 SELLP14151 372 aa11.52□□□□□ -0.57
GGA3-203ENST00000577435 PRDX2P32119 198 aa11.52□□□□□ -0.57
GGA3-203ENST00000577435 GABRA2P47869 451 aa11.52□□□□□ -0.57
GGA3-203ENST00000577435 RBP2P50120 134 aa11.52□□□□□ -0.57
GGA3-203ENST00000577435 ATP1B3P54709 279 aa11.52□□□□□ -0.57
GGA3-203ENST00000577435 ARF6P62330 175 aa11.52□□□□□ -0.57
GGA3-203ENST00000577435 SLC34A1Q06495 639 aa11.52□□□□□ -0.57
GGA3-203ENST00000577435 PDCD1Q15116 288 aa11.52□□□□□ -0.57
GGA3-203ENST00000577435 CCDC58Q4VC31 144 aa11.52□□□□□ -0.57
GGA3-203ENST00000577435 GPR157Q5UAW9 335 aa11.52□□□□□ -0.57
GGA3-203ENST00000577435 RBMS3Q6XE24 437 aaKnown RBP11.52□□□□□ -0.57
GGA3-203ENST00000577435 C1orf122Q6ZSJ8 110 aa11.52□□□□□ -0.57
GGA3-203ENST00000577435 ZNF561Q8N587 486 aa11.52□□□□□ -0.57
GGA3-203ENST00000577435 CD177Q8N6Q3 437 aa11.52□□□□□ -0.57
GGA3-203ENST00000577435 KIR3DL3Q8N743 410 aa11.52□□□□□ -0.57
GGA3-203ENST00000577435 ZDHHC22Q8N966 263 aa11.52□□□□□ -0.57
GGA3-203ENST00000577435 ZNRF1Q8ND25 227 aa11.52□□□□□ -0.57
GGA3-203ENST00000577435 OR51A4Q8NGJ6 313 aa11.52□□□□□ -0.57
GGA3-203ENST00000577435 OR10AC1Q8NH08 325 aa11.52□□□□□ -0.57
GGA3-203ENST00000577435 OR5AK2Q8NH90 309 aa11.52□□□□□ -0.57
GGA3-203ENST00000577435 TRMT10AQ8TBZ6 339 aaKnown RBP11.52□□□□□ -0.57
GGA3-203ENST00000577435 RPS4Y2Q8TD47 263 aa11.52□□□□□ -0.57
GGA3-203ENST00000577435 FAM216AQ8WUB2 273 aa11.52□□□□□ -0.57
GGA3-203ENST00000577435 SPSB1Q96BD6 273 aa11.52□□□□□ -0.57
GGA3-203ENST00000577435 ZNF488Q96MN9 340 aa11.52□□□□□ -0.57
GGA3-203ENST00000577435 PCGF1Q9BSM1 259 aa11.52□□□□□ -0.57
GGA3-203ENST00000577435 VCXQ9H320 206 aa11.52□□□□□ -0.57
GGA3-203ENST00000577435 MTCH1Q9NZJ7 389 aa11.52□□□□□ -0.57
GGA3-203ENST00000577435 NKX1-2Q9UD57 310 aaPredicted RBP11.52□□□□□ -0.57
GGA3-203ENST00000577435 EXOSC1Q9Y3B2 195 aaKnown RBP11.52□□□□□ -0.57
GGA3-203ENST00000577435 CENPVL3A0A0U1RRI6 287 aa11.51□□□□□ -0.57
GGA3-203ENST00000577435 H0YJX3 145 aa11.51□□□□□ -0.57
GGA3-203ENST00000577435 NXPH2O95156 264 aa11.51□□□□□ -0.57
GGA3-203ENST00000577435 KNG1P01042 644 aa11.51□□□□□ -0.57
GGA3-203ENST00000577435 TFF1P04155 84 aa11.51□□□□□ -0.57
GGA3-203ENST00000577435 SFTPBP07988 381 aa11.51□□□□□ -0.57
GGA3-203ENST00000577435 GNAO1P09471 354 aa11.51□□□□□ -0.57
GGA3-203ENST00000577435 PIPP12273 146 aaPredicted RBP11.51□□□□□ -0.57
GGA3-203ENST00000577435 ZNF20P17024 532 aa11.51□□□□□ -0.57
GGA3-203ENST00000577435 ETV1P50549 477 aa11.51□□□□□ -0.57
GGA3-203ENST00000577435 RPL22L1Q6P5R6 122 aaKnown RBP11.51□□□□□ -0.57
GGA3-203ENST00000577435 METAP1DQ6UB28 335 aaPredicted RBP11.51□□□□□ -0.57
GGA3-203ENST00000577435 TMPRSS11AQ6ZMR5 421 aa11.51□□□□□ -0.57
GGA3-203ENST00000577435 MKXQ8IYA7 352 aa11.51□□□□□ -0.57
GGA3-203ENST00000577435 C8orf59Q8N0T1 100 aaPredicted RBP11.51□□□□□ -0.57
GGA3-203ENST00000577435 PARP16Q8N5Y8 322 aa11.51□□□□□ -0.57
GGA3-203ENST00000577435 SIGLECL1Q8N7X8 197 aa11.51□□□□□ -0.57
GGA3-203ENST00000577435 OR13C3Q8NGS6 347 aa11.51□□□□□ -0.57
GGA3-203ENST00000577435 NPRL2Q8WTW4 380 aa11.51□□□□□ -0.57
GGA3-203ENST00000577435 TFAP2CQ92754 450 aa11.51□□□□□ -0.57
GGA3-203ENST00000577435 GGHQ92820 318 aa11.51□□□□□ -0.57
GGA3-203ENST00000577435 TMEM80Q96HE8 168 aa11.51□□□□□ -0.57
GGA3-203ENST00000577435 CEP19Q96LK0 163 aa11.51□□□□□ -0.57
GGA3-203ENST00000577435 ZNF48Q96MX3 618 aaPredicted RBP11.51□□□□□ -0.57
GGA3-203ENST00000577435 PDCD1LG2Q9BQ51 273 aa11.51□□□□□ -0.57
GGA3-203ENST00000577435 COMMD4Q9H0A8 199 aa11.51□□□□□ -0.57
GGA3-203ENST00000577435 ESM1Q9NQ30 184 aa11.51□□□□□ -0.57
GGA3-203ENST00000577435 PLCXD1Q9NUJ7 323 aa11.51□□□□□ -0.57
GGA3-203ENST00000577435 DSCAML1Q8TD84 2053 aa11.51□□□□□ -0.57
GGA3-203ENST00000577435 IGHV3OR16-10A0A075B7F0 116 aa11.5□□□□□ -0.57
GGA3-203ENST00000577435 TRBV23-1A0A0A0MS06 115 aa11.5□□□□□ -0.57
GGA3-203ENST00000577435 TRBV2A0A0J9YWF9 115 aa11.5□□□□□ -0.57
GGA3-203ENST00000577435 OGG1O15527 345 aa11.5□□□□□ -0.57
GGA3-203ENST00000577435 RGS9O75916 674 aaPredicted RBP11.5□□□□□ -0.57
GGA3-203ENST00000577435 NDUFB7P17568 137 aa11.5□□□□□ -0.57
GGA3-203ENST00000577435 AZGP1P25311 298 aaKnown RBP11.5□□□□□ -0.57
GGA3-203ENST00000577435 GTF2A1P52655 376 aaPredicted RBP11.5□□□□□ -0.57
GGA3-203ENST00000577435 MTCP1P56278 107 aa11.5□□□□□ -0.57
GGA3-203ENST00000577435 LAIR2Q6ISS4 152 aa11.5□□□□□ -0.57
GGA3-203ENST00000577435 LHFPL2Q6ZUX7 228 aa11.5□□□□□ -0.57
GGA3-203ENST00000577435 SLC25A26Q70HW3 274 aa11.5□□□□□ -0.57
GGA3-203ENST00000577435 SERPINA12Q8IW75 414 aa11.5□□□□□ -0.57
GGA3-203ENST00000577435 Q8IYB0 196 aa11.5□□□□□ -0.57
GGA3-203ENST00000577435 CMTM4Q8IZR5 234 aa11.5□□□□□ -0.57
GGA3-203ENST00000577435 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.5□□□□□ -0.57
GGA3-203ENST00000577435 OR5D14Q8NGL3 314 aa11.5□□□□□ -0.57
GGA3-203ENST00000577435 FAM234AQ9H0X4 552 aa11.5□□□□□ -0.57
GGA3-203ENST00000577435 ZCCHC4Q9H5U6 513 aa11.5□□□□□ -0.57
GGA3-203ENST00000577435 UNKLQ9H9P5 680 aaKnown RBP11.5□□□□□ -0.57
GGA3-203ENST00000577435 ZMAT3Q9HA38 289 aaKnown RBP11.5□□□□□ -0.57
GGA3-203ENST00000577435 BABAM2Q9NXR7 383 aa11.5□□□□□ -0.57
GGA3-203ENST00000577435 CNOT2Q9NZN8 540 aaKnown RBP11.5□□□□□ -0.57
GGA3-203ENST00000577435 EFCAB10A6NFE3 127 aa11.49□□□□□ -0.57
GGA3-203ENST00000577435 F8VVB4 439 aa11.49□□□□□ -0.57
GGA3-203ENST00000577435 F8VWA3 439 aa11.49□□□□□ -0.57
GGA3-203ENST00000577435 CLDN34H7C241 214 aa11.49□□□□□ -0.57
GGA3-203ENST00000577435 M0R1W7 72 aa11.49□□□□□ -0.57
GGA3-203ENST00000577435 SLC1A7O00341 560 aa11.49□□□□□ -0.57
GGA3-203ENST00000577435 MYL12AP19105 171 aa11.49□□□□□ -0.57
GGA3-203ENST00000577435 PRTN3P24158 256 aa11.49□□□□□ -0.57
GGA3-203ENST00000577435 UBA52P62987 128 aaKnown RBP11.49□□□□□ -0.57
GGA3-203ENST00000577435 ST3GAL4Q11206 333 aa11.49□□□□□ -0.57
GGA3-203ENST00000577435 PDZK1IP1Q13113 114 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms