RNA–Protein interactions for RNA: ENST00000575599.5

RPAIN-216, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-216ENST00000575599 ZNF12P17014 697 aa11.04□□□□□ -0.64
RPAIN-216ENST00000575599 CCL1P22362 96 aa11.04□□□□□ -0.64
RPAIN-216ENST00000575599 CPT2P23786 658 aa11.04□□□□□ -0.64
RPAIN-216ENST00000575599 KIR3DL2P43630 455 aa11.04□□□□□ -0.64
RPAIN-216ENST00000575599 NANOS3P60323 173 aaKnown RBP11.04□□□□□ -0.64
RPAIN-216ENST00000575599 RPS25P62851 125 aaKnown RBP11.04□□□□□ -0.64
RPAIN-216ENST00000575599 SSX1Q16384 188 aa11.04□□□□□ -0.64
RPAIN-216ENST00000575599 MICBQ29980 383 aa11.04□□□□□ -0.64
RPAIN-216ENST00000575599 CLVS2Q5SYC1 327 aa11.04□□□□□ -0.64
RPAIN-216ENST00000575599 TEX36Q5VZQ5 186 aa11.04□□□□□ -0.64
RPAIN-216ENST00000575599 WDR25Q64LD2 544 aaPredicted RBP11.04□□□□□ -0.64
RPAIN-216ENST00000575599 KRT74Q7RTS7 529 aa11.04□□□□□ -0.64
RPAIN-216ENST00000575599 TSEN15Q8WW01 171 aaKnown RBP11.04□□□□□ -0.64
RPAIN-216ENST00000575599 PDCD1LG2Q9BQ51 273 aa11.04□□□□□ -0.64
RPAIN-216ENST00000575599 CHCHD6Q9BRQ6 235 aa11.04□□□□□ -0.64
RPAIN-216ENST00000575599 FAM192AQ9GZU8 254 aa11.04□□□□□ -0.64
RPAIN-216ENST00000575599 DNAJB11Q9UBS4 358 aa11.04□□□□□ -0.64
RPAIN-216ENST00000575599 STUB1Q9UNE7 303 aa11.04□□□□□ -0.64
RPAIN-216ENST00000575599 GSTK1Q9Y2Q3 226 aa11.04□□□□□ -0.64
RPAIN-216ENST00000575599 POLR3KQ9Y2Y1 108 aaPredicted RBP11.04□□□□□ -0.64
RPAIN-216ENST00000575599 INSIG2Q9Y5U4 225 aa11.04□□□□□ -0.64
RPAIN-216ENST00000575599 SIRT4Q9Y6E7 314 aaPredicted RBP11.04□□□□□ -0.64
RPAIN-216ENST00000575599 OR4C45A6NMZ5 311 aa11.03□□□□□ -0.64
RPAIN-216ENST00000575599 DHRS7CA6NNS2 312 aa11.03□□□□□ -0.64
RPAIN-216ENST00000575599 SRRM5B3KS81 715 aa11.03□□□□□ -0.64
RPAIN-216ENST00000575599 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.03□□□□□ -0.64
RPAIN-216ENST00000575599 TMPRSS2O15393 492 aa11.03□□□□□ -0.64
RPAIN-216ENST00000575599 AKR7A2O43488 359 aa11.03□□□□□ -0.64
RPAIN-216ENST00000575599 RHBDL1O75783 438 aa11.03□□□□□ -0.64
RPAIN-216ENST00000575599 ZFPL1O95159 310 aa11.03□□□□□ -0.64
RPAIN-216ENST00000575599 GADD45AP24522 165 aa11.03□□□□□ -0.64
RPAIN-216ENST00000575599 TGFBR2P37173 567 aa11.03□□□□□ -0.64
RPAIN-216ENST00000575599 TMBIM6P55061 237 aa11.03□□□□□ -0.64
RPAIN-216ENST00000575599 SRSF2Q01130 221 aaKnown RBP11.03□□□□□ -0.64
RPAIN-216ENST00000575599 DOC2BQ14184 412 aa11.03□□□□□ -0.64
RPAIN-216ENST00000575599 YIF1BQ5BJH7 314 aa11.03□□□□□ -0.64
RPAIN-216ENST00000575599 FAM76BQ5HYJ3 339 aa11.03□□□□□ -0.64
RPAIN-216ENST00000575599 LCE2CQ5TA81 110 aa11.03□□□□□ -0.64
RPAIN-216ENST00000575599 HAGHLQ6PII5 290 aaPredicted RBP11.03□□□□□ -0.64
RPAIN-216ENST00000575599 BTNL3Q6UXE8 466 aa11.03□□□□□ -0.64
RPAIN-216ENST00000575599 GDPGP1Q6ZNW5 385 aa11.03□□□□□ -0.64
RPAIN-216ENST00000575599 C1QL2Q7Z5L3 287 aa11.03□□□□□ -0.64
RPAIN-216ENST00000575599 ANKRD13BQ86YJ7 626 aa11.03□□□□□ -0.64
RPAIN-216ENST00000575599 RDH10Q8IZV5 341 aa11.03□□□□□ -0.64
RPAIN-216ENST00000575599 TEX29Q8N6K0 151 aa11.03□□□□□ -0.64
RPAIN-216ENST00000575599 OR5A2Q8NGI9 324 aa11.03□□□□□ -0.64
RPAIN-216ENST00000575599 OR10Z1Q8NGY1 313 aa11.03□□□□□ -0.64
RPAIN-216ENST00000575599 TRMT10AQ8TBZ6 339 aaKnown RBP11.03□□□□□ -0.64
RPAIN-216ENST00000575599 GPR148Q8TDV2 347 aa11.03□□□□□ -0.64
RPAIN-216ENST00000575599 NPRL2Q8WTW4 380 aa11.03□□□□□ -0.64
RPAIN-216ENST00000575599 RAB2BQ8WUD1 216 aa11.03□□□□□ -0.64
RPAIN-216ENST00000575599 THRSPQ92748 146 aa11.03□□□□□ -0.64
RPAIN-216ENST00000575599 MRI1Q9BV20 369 aa11.03□□□□□ -0.64
RPAIN-216ENST00000575599 WDR13Q9H1Z4 485 aa11.03□□□□□ -0.64
RPAIN-216ENST00000575599 OR51I2Q9H344 312 aa11.03□□□□□ -0.64
RPAIN-216ENST00000575599 SNTG1Q9NSN8 517 aa11.03□□□□□ -0.64
RPAIN-216ENST00000575599 OPN4Q9UHM6 478 aa11.03□□□□□ -0.64
RPAIN-216ENST00000575599 HHLA2Q9UM44 414 aa11.03□□□□□ -0.64
RPAIN-216ENST00000575599 AUP1Q9Y679 476 aa11.03□□□□□ -0.64
RPAIN-216ENST00000575599 IGHV2-70DA0A0C4DH43 119 aa11.03□□□□□ -0.64
RPAIN-216ENST00000575599 A0A1B0GW55 424 aa11.03□□□□□ -0.64
RPAIN-216ENST00000575599 ANKRD61A6NGH8 418 aa11.03□□□□□ -0.64
RPAIN-216ENST00000575599 NDUFA2O43678 99 aa11.03□□□□□ -0.64
RPAIN-216ENST00000575599 CD2P06729 351 aa11.03□□□□□ -0.64
RPAIN-216ENST00000575599 OCM2P0CE71 109 aa11.03□□□□□ -0.64
RPAIN-216ENST00000575599 DUX4L2P0CJ85 424 aa11.03□□□□□ -0.64
RPAIN-216ENST00000575599 DUX4L3P0CJ86 424 aa11.03□□□□□ -0.64
RPAIN-216ENST00000575599 DUX4L4P0CJ87 422 aa11.03□□□□□ -0.64
RPAIN-216ENST00000575599 DUX4L5P0CJ88 424 aa11.03□□□□□ -0.64
RPAIN-216ENST00000575599 DUX4L6P0CJ89 424 aa11.03□□□□□ -0.64
RPAIN-216ENST00000575599 DUX4L7P0CJ90 424 aa11.03□□□□□ -0.64
RPAIN-216ENST00000575599 MUC1P15941 1255 aaPredicted RBP11.03□□□□□ -0.64
RPAIN-216ENST00000575599 GLRA1P23415 457 aa11.03□□□□□ -0.64
RPAIN-216ENST00000575599 MAPK3P27361 379 aaPredicted RBP11.03□□□□□ -0.64
RPAIN-216ENST00000575599 CFHR2P36980 270 aa11.03□□□□□ -0.64
RPAIN-216ENST00000575599 HAAOP46952 286 aa11.03□□□□□ -0.64
RPAIN-216ENST00000575599 SMCPP49901 116 aaPredicted RBP11.03□□□□□ -0.64
RPAIN-216ENST00000575599 NPY4RP50391 375 aa11.03□□□□□ -0.64
RPAIN-216ENST00000575599 LSM3P62310 102 aaKnown RBP11.03□□□□□ -0.64
RPAIN-216ENST00000575599 ACSM3Q53FZ2 586 aa11.03□□□□□ -0.64
RPAIN-216ENST00000575599 TMEM42Q69YG0 159 aa11.03□□□□□ -0.64
RPAIN-216ENST00000575599 DUX4L9Q6RFH8 374 aaPredicted RBP11.03□□□□□ -0.64
RPAIN-216ENST00000575599 ZNF841Q6ZN19 808 aa11.03□□□□□ -0.64
RPAIN-216ENST00000575599 Q6ZSR3 168 aa11.03□□□□□ -0.64
RPAIN-216ENST00000575599 CEACAM19Q7Z692 300 aa11.03□□□□□ -0.64
RPAIN-216ENST00000575599 OR5T2Q8NGG2 359 aa11.03□□□□□ -0.64
RPAIN-216ENST00000575599 NANPQ8TBE9 248 aa11.03□□□□□ -0.64
RPAIN-216ENST00000575599 RAB40AQ8WXH6 277 aa11.03□□□□□ -0.64
RPAIN-216ENST00000575599 DGCR14Q96DF8 476 aaKnown RBP11.03□□□□□ -0.64
RPAIN-216ENST00000575599 PGLYRP3Q96LB9 341 aa11.03□□□□□ -0.64
RPAIN-216ENST00000575599 CCL13Q99616 98 aa11.03□□□□□ -0.64
RPAIN-216ENST00000575599 OR51E2Q9H255 320 aa11.03□□□□□ -0.64
RPAIN-216ENST00000575599 SMURF1Q9HCE7 757 aa11.03□□□□□ -0.64
RPAIN-216ENST00000575599 DUX4Q9UBX2 424 aa11.03□□□□□ -0.64
RPAIN-216ENST00000575599 RSL24D1Q9UHA3 163 aaKnown RBP11.03□□□□□ -0.64
RPAIN-216ENST00000575599 DHDHQ9UQ10 334 aa11.03□□□□□ -0.64
RPAIN-216ENST00000575599 TRDV1A0A1B0GX56 115 aa11.02□□□□□ -0.65
RPAIN-216ENST00000575599 A6NHS1 94 aa11.02□□□□□ -0.65
RPAIN-216ENST00000575599 C22orf46C9J442 243 aa11.02□□□□□ -0.65
RPAIN-216ENST00000575599 TNFRSF13BO14836 293 aaPredicted RBP11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms