RNA–Protein interactions for RNA: ENST00000574755.5

VPS33B-208, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 2,356 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-208ENST00000574755 ZNF292O60281 2723 aa12.13□□□□□ -0.47
VPS33B-208ENST00000574755 TNRC6AQ8NDV7 1962 aaKnown RBP12.12□□□□□ -0.47
VPS33B-208ENST00000574755 RFPL4AA6NLU0 287 aa12.12□□□□□ -0.47
VPS33B-208ENST00000574755 FAM25EA8MYX2 175 aa12.12□□□□□ -0.47
VPS33B-208ENST00000574755 RFPL4AL1F8VTS6 287 aa12.12□□□□□ -0.47
VPS33B-208ENST00000574755 CFDP00746 253 aaPredicted RBP12.12□□□□□ -0.47
VPS33B-208ENST00000574755 PI3P19957 117 aa12.12□□□□□ -0.47
VPS33B-208ENST00000574755 APLNRP35414 380 aa12.12□□□□□ -0.47
VPS33B-208ENST00000574755 ARPC4P59998 168 aa12.12□□□□□ -0.47
VPS33B-208ENST00000574755 FGL1Q08830 312 aa12.12□□□□□ -0.47
VPS33B-208ENST00000574755 PRDX4Q13162 271 aa12.12□□□□□ -0.47
VPS33B-208ENST00000574755 AADACL3Q5VUY0 350 aa12.12□□□□□ -0.47
VPS33B-208ENST00000574755 IGF2-ASQ6U949 168 aa12.12□□□□□ -0.47
VPS33B-208ENST00000574755 SLC25A26Q70HW3 274 aa12.12□□□□□ -0.47
VPS33B-208ENST00000574755 ZSCAN4Q8NAM6 433 aaPredicted RBP12.12□□□□□ -0.47
VPS33B-208ENST00000574755 OR10AD1Q8NGE0 317 aa12.12□□□□□ -0.47
VPS33B-208ENST00000574755 NANOS1Q8WY41 292 aaKnown RBP12.12□□□□□ -0.47
VPS33B-208ENST00000574755 GMPPAQ96IJ6 420 aaPredicted RBP12.12□□□□□ -0.47
VPS33B-208ENST00000574755 CITED4Q96RK1 184 aa12.12□□□□□ -0.47
VPS33B-208ENST00000574755 CMSS1Q9BQ75 279 aaKnown RBP12.12□□□□□ -0.47
VPS33B-208ENST00000574755 MAB21L2Q9Y586 359 aa12.12□□□□□ -0.47
VPS33B-208ENST00000574755 FRYQ5TBA9 3013 aa12.12□□□□□ -0.47
VPS33B-208ENST00000574755 IGKV1D-8A0A087WSZ0 117 aa12.12□□□□□ -0.47
VPS33B-208ENST00000574755 OR5H14A6NHG9 310 aa12.12□□□□□ -0.47
VPS33B-208ENST00000574755 CD8AP01732 235 aa12.12□□□□□ -0.47
VPS33B-208ENST00000574755 CHATP28329 748 aa12.12□□□□□ -0.47
VPS33B-208ENST00000574755 LRRC37A5PQ49AS3 106 aa12.12□□□□□ -0.47
VPS33B-208ENST00000574755 IGFL2Q6UWQ7 119 aa12.12□□□□□ -0.47
VPS33B-208ENST00000574755 SULT4A1Q9BR01 284 aa12.12□□□□□ -0.47
VPS33B-208ENST00000574755 ARL6Q9H0F7 186 aa12.12□□□□□ -0.47
VPS33B-208ENST00000574755 COMMD9Q9P000 198 aa12.12□□□□□ -0.47
VPS33B-208ENST00000574755 TRAV14DV4A0A0A6YYC5 116 aa12.11□□□□□ -0.47
VPS33B-208ENST00000574755 TRAV17A0A0B4J275 112 aa12.11□□□□□ -0.47
VPS33B-208ENST00000574755 IGHG3P01860 377 aa12.11□□□□□ -0.47
VPS33B-208ENST00000574755 HLA-GP17693 338 aa12.11□□□□□ -0.47
VPS33B-208ENST00000574755 DEFB109BQ30KR1 87 aa12.11□□□□□ -0.47
VPS33B-208ENST00000574755 BRICD5Q6PL45 260 aa12.11□□□□□ -0.47
VPS33B-208ENST00000574755 TMUB2Q71RG4 321 aa12.11□□□□□ -0.47
VPS33B-208ENST00000574755 DPPA2Q7Z7J5 298 aa12.11□□□□□ -0.47
VPS33B-208ENST00000574755 PEG10Q86TG7 708 aaKnown RBP12.11□□□□□ -0.47
VPS33B-208ENST00000574755 ZDHHC23Q8IYP9 409 aa12.11□□□□□ -0.47
VPS33B-208ENST00000574755 GCNT2Q8N0V5 402 aa12.11□□□□□ -0.47
VPS33B-208ENST00000574755 BATF2Q8N1L9 274 aa12.11□□□□□ -0.47
VPS33B-208ENST00000574755 BHLHE23Q8NDY6 225 aa12.11□□□□□ -0.47
VPS33B-208ENST00000574755 PRSS33Q8NF86 280 aa12.11□□□□□ -0.47
VPS33B-208ENST00000574755 TMEM185AQ8NFB2 350 aa12.11□□□□□ -0.47
VPS33B-208ENST00000574755 IRF2BPLQ9H1B7 796 aa12.11□□□□□ -0.47
VPS33B-208ENST00000574755 EDARQ9UNE0 448 aa12.11□□□□□ -0.47
VPS33B-208ENST00000574755 OSGIN2Q9Y236 505 aa12.11□□□□□ -0.47
VPS33B-208ENST00000574755 SS18L1O75177 396 aaPredicted RBP12.11□□□□□ -0.47
VPS33B-208ENST00000574755 GPM6AP51674 278 aa12.11□□□□□ -0.47
VPS33B-208ENST00000574755 AP2S1P53680 142 aaPredicted RBP12.11□□□□□ -0.47
VPS33B-208ENST00000574755 C3P1Q6ZMU1 363 aa12.11□□□□□ -0.47
VPS33B-208ENST00000574755 BCL2L2Q92843 193 aaPredicted RBP12.11□□□□□ -0.47
VPS33B-208ENST00000574755 TMEM230Q96A57 120 aa12.11□□□□□ -0.47
VPS33B-208ENST00000574755 TRIB1Q96RU8 372 aa12.11□□□□□ -0.47
VPS33B-208ENST00000574755 RTBDNQ9BSG5 229 aaPredicted RBP12.11□□□□□ -0.47
VPS33B-208ENST00000574755 MFFQ9GZY8 342 aa12.11□□□□□ -0.47
VPS33B-208ENST00000574755 OR51B6Q9H340 312 aa12.11□□□□□ -0.47
VPS33B-208ENST00000574755 CRIM1Q9NZV1 1036 aa12.11□□□□□ -0.47
VPS33B-208ENST00000574755 ZNF629Q9UEG4 869 aaPredicted RBP12.11□□□□□ -0.47
VPS33B-208ENST00000574755 ANXA10Q9UJ72 324 aa12.11□□□□□ -0.47
VPS33B-208ENST00000574755 SPENQ96T58 3664 aaKnown RBP12.1□□□□□ -0.47
VPS33B-208ENST00000574755 PQLC2LA1A4F0 135 aa12.1□□□□□ -0.47
VPS33B-208ENST00000574755 RP2O75695 350 aa12.1□□□□□ -0.47
VPS33B-208ENST00000574755 RPA2P15927 270 aa12.1□□□□□ -0.47
VPS33B-208ENST00000574755 HAAOP46952 286 aa12.1□□□□□ -0.47
VPS33B-208ENST00000574755 NPBWR2P48146 333 aa12.1□□□□□ -0.47
VPS33B-208ENST00000574755 RBM11P57052 281 aaKnown RBP12.1□□□□□ -0.47
VPS33B-208ENST00000574755 SRSF4Q08170 494 aaKnown RBP12.1□□□□□ -0.47
VPS33B-208ENST00000574755 PDCD1Q15116 288 aa12.1□□□□□ -0.47
VPS33B-208ENST00000574755 CEACAM21Q3KPI0 293 aa12.1□□□□□ -0.47
VPS33B-208ENST00000574755 ZNF546Q86UE3 836 aa12.1□□□□□ -0.47
VPS33B-208ENST00000574755 MDP1Q86V88 176 aa12.1□□□□□ -0.47
VPS33B-208ENST00000574755 PPP1R1CQ8WVI7 109 aa12.1□□□□□ -0.47
VPS33B-208ENST00000574755 HPSE2Q8WWQ2 592 aa12.1□□□□□ -0.47
VPS33B-208ENST00000574755 DYRK2Q92630 601 aa12.1□□□□□ -0.47
VPS33B-208ENST00000574755 WBP1Q96G27 269 aa12.1□□□□□ -0.47
VPS33B-208ENST00000574755 OPA3Q9H6K4 179 aa12.1□□□□□ -0.47
VPS33B-208ENST00000574755 MSTNO14793 375 aa12.1□□□□□ -0.47
VPS33B-208ENST00000574755 OR7C1O76099 320 aaPredicted RBP12.1□□□□□ -0.47
VPS33B-208ENST00000574755 CST4P01036 141 aa12.1□□□□□ -0.47
VPS33B-208ENST00000574755 FCGR3AP08637 254 aa12.1□□□□□ -0.47
VPS33B-208ENST00000574755 OPRM1P35372 400 aa12.1□□□□□ -0.47
VPS33B-208ENST00000574755 NOVA1P51513 510 aaKnown RBP12.1□□□□□ -0.47
VPS33B-208ENST00000574755 SLC9A3R2Q15599 337 aa12.1□□□□□ -0.47
VPS33B-208ENST00000574755 CLEC18BQ6UXF7 455 aa12.1□□□□□ -0.47
VPS33B-208ENST00000574755 SLC30A7Q8NEW0 376 aa12.1□□□□□ -0.47
VPS33B-208ENST00000574755 ZNF2Q9BSG1 426 aaPredicted RBP12.1□□□□□ -0.47
VPS33B-208ENST00000574755 GLRX2Q9NS18 164 aa12.1□□□□□ -0.47
VPS33B-208ENST00000574755 CLCF1Q9UBD9 225 aa12.1□□□□□ -0.47
VPS33B-208ENST00000574755 C5orf51A6NDU8 294 aa12.09□□□□□ -0.47
VPS33B-208ENST00000574755 DBX1A6NMT0 343 aa12.09□□□□□ -0.47
VPS33B-208ENST00000574755 EEF1E1-BLOC1S5C9J1V9 151 aa12.09□□□□□ -0.47
VPS33B-208ENST00000574755 PDCD6O75340 191 aa12.09□□□□□ -0.47
VPS33B-208ENST00000574755 SFT2D2O95562 160 aa12.09□□□□□ -0.47
VPS33B-208ENST00000574755 GLRA1P23415 457 aa12.09□□□□□ -0.47
VPS33B-208ENST00000574755 DTYMKP23919 212 aa12.09□□□□□ -0.47
VPS33B-208ENST00000574755 WNT5AP41221 380 aa12.09□□□□□ -0.47
VPS33B-208ENST00000574755 PCNPQ8WW12 178 aaKnown RBP12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms