RNA–Protein interactions for RNA: ENST00000574437.5

ABR-228, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

TSL 5 BASIC

Gene ABR, Length 3,196 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-228ENST00000574437 RSU1Q15404 277 aa13□□□□□ -0.33
ABR-228ENST00000574437 ZNF561Q8N587 486 aa13□□□□□ -0.33
ABR-228ENST00000574437 NFAM1Q8NET5 270 aaPredicted RBP13□□□□□ -0.33
ABR-228ENST00000574437 RTN4IP1Q8WWV3 396 aaPredicted RBP13□□□□□ -0.33
ABR-228ENST00000574437 A0A1W2PPE2 198 aa12.99□□□□□ -0.33
ABR-228ENST00000574437 TIAF1O95411 115 aa12.99□□□□□ -0.33
ABR-228ENST00000574437 GAPDHP04406 335 aaKnown RBP12.99□□□□□ -0.33
ABR-228ENST00000574437 CTSDP07339 412 aaPredicted RBP12.99□□□□□ -0.33
ABR-228ENST00000574437 CCL1P22362 96 aa12.99□□□□□ -0.33
ABR-228ENST00000574437 SNCAP37840 140 aa12.99□□□□□ -0.33
ABR-228ENST00000574437 STARD6P59095 220 aa12.99□□□□□ -0.33
ABR-228ENST00000574437 FAM3AP98173 230 aa12.99□□□□□ -0.33
ABR-228ENST00000574437 RPUSD3Q6P087 351 aaKnown RBP12.99□□□□□ -0.33
ABR-228ENST00000574437 PLXDC2Q6UX71 529 aa12.99□□□□□ -0.33
ABR-228ENST00000574437 BATF2Q8N1L9 274 aa12.99□□□□□ -0.33
ABR-228ENST00000574437 LIME1Q9H400 295 aa12.99□□□□□ -0.33
ABR-228ENST00000574437 GHRLQ9UBU3 117 aa12.99□□□□□ -0.33
ABR-228ENST00000574437 WNT16Q9UBV4 365 aa12.99□□□□□ -0.33
ABR-228ENST00000574437 CRYM-AS1A6NIL9 109 aa12.99□□□□□ -0.33
ABR-228ENST00000574437 FAM157AC9JC47 383 aa12.99□□□□□ -0.33
ABR-228ENST00000574437 PIAS2O75928 621 aa12.99□□□□□ -0.33
ABR-228ENST00000574437 NAT2P11245 290 aa12.99□□□□□ -0.33
ABR-228ENST00000574437 PNLIPP16233 465 aa12.99□□□□□ -0.33
ABR-228ENST00000574437 MSR1P21757 451 aa12.99□□□□□ -0.33
ABR-228ENST00000574437 THBS4P35443 961 aa12.99□□□□□ -0.33
ABR-228ENST00000574437 NHLH2Q02577 135 aa12.99□□□□□ -0.33
ABR-228ENST00000574437 MEX3BQ6ZN04 569 aaKnown RBP12.99□□□□□ -0.33
ABR-228ENST00000574437 GJC3Q8NFK1 279 aa12.99□□□□□ -0.33
ABR-228ENST00000574437 OR5L2Q8NGL0 311 aa12.99□□□□□ -0.33
ABR-228ENST00000574437 FAM213BQ8TBF2 198 aa12.99□□□□□ -0.33
ABR-228ENST00000574437 JSRP1Q96MG2 331 aaPredicted RBP12.99□□□□□ -0.33
ABR-228ENST00000574437 PLEKHA2Q9HB19 425 aa12.99□□□□□ -0.33
ABR-228ENST00000574437 WFDC1Q9HC57 220 aa12.99□□□□□ -0.33
ABR-228ENST00000574437 KCNJ16Q9NPI9 418 aa12.99□□□□□ -0.33
ABR-228ENST00000574437 PISDQ9UG56 409 aa12.99□□□□□ -0.33
ABR-228ENST00000574437 PUS1Q9Y606 427 aaKnown RBP eCLIP12.99□□□□□ -0.33
ABR-228ENST00000574437 C5orf52A6NGY3 159 aa12.98□□□□□ -0.33
ABR-228ENST00000574437 E5RGE8 158 aa12.98□□□□□ -0.33
ABR-228ENST00000574437 G3V3Y1 287 aa12.98□□□□□ -0.33
ABR-228ENST00000574437 GLP1RP43220 463 aa12.98□□□□□ -0.33
ABR-228ENST00000574437 CRIP3Q6Q6R5 217 aa12.98□□□□□ -0.33
ABR-228ENST00000574437 FBXW12Q6X9E4 464 aa12.98□□□□□ -0.33
ABR-228ENST00000574437 TMEM182Q6ZP80 229 aaPredicted RBP12.98□□□□□ -0.33
ABR-228ENST00000574437 HAS2Q92819 552 aa12.98□□□□□ -0.33
ABR-228ENST00000574437 OR6C1Q96RD1 312 aa12.98□□□□□ -0.33
ABR-228ENST00000574437 RNF122Q9H9V4 155 aa12.98□□□□□ -0.33
ABR-228ENST00000574437 FSCN3Q9NQT6 498 aa12.98□□□□□ -0.33
ABR-228ENST00000574437 MYOTQ9UBF9 498 aa12.98□□□□□ -0.33
ABR-228ENST00000574437 AK3Q9UIJ7 227 aa12.98□□□□□ -0.33
ABR-228ENST00000574437 NSG2Q9Y328 171 aa12.98□□□□□ -0.33
ABR-228ENST00000574437 POMT1Q9Y6A1 747 aa12.98□□□□□ -0.33
ABR-228ENST00000574437 M0R135 149 aa12.98□□□□□ -0.33
ABR-228ENST00000574437 SLC33A1O00400 549 aaPredicted RBP12.98□□□□□ -0.33
ABR-228ENST00000574437 MSX1P28360 303 aa12.98□□□□□ -0.33
ABR-228ENST00000574437 HGFACQ04756 655 aa12.98□□□□□ -0.33
ABR-228ENST00000574437 PHYHD1Q5SRE7 291 aa12.98□□□□□ -0.33
ABR-228ENST00000574437 UBAC2Q8NBM4 344 aa12.98□□□□□ -0.33
ABR-228ENST00000574437 SSC4DQ8WTU2 575 aa12.98□□□□□ -0.33
ABR-228ENST00000574437 ZNF799Q96GE5 643 aa12.98□□□□□ -0.33
ABR-228ENST00000574437 C19orf12Q9NSK7 152 aa12.98□□□□□ -0.33
ABR-228ENST00000574437 S100A8P05109 93 aa12.97□□□□□ -0.33
ABR-228ENST00000574437 ACKR3P25106 362 aa12.97□□□□□ -0.33
ABR-228ENST00000574437 ARL6IP1Q15041 203 aa12.97□□□□□ -0.33
ABR-228ENST00000574437 HMGN3Q15651 99 aa12.97□□□□□ -0.33
ABR-228ENST00000574437 TMEM156Q8N614 296 aa12.97□□□□□ -0.33
ABR-228ENST00000574437 ZNF565Q8N9K5 539 aa12.97□□□□□ -0.33
ABR-228ENST00000574437 SLC22A8Q8TCC7 542 aa12.97□□□□□ -0.33
ABR-228ENST00000574437 SLC25A43Q8WUT9 341 aaPredicted RBP12.97□□□□□ -0.33
ABR-228ENST00000574437 ZNF385AQ96PM9 386 aaKnown RBP12.97□□□□□ -0.33
ABR-228ENST00000574437 DEFB126Q9BYW3 111 aa12.97□□□□□ -0.33
ABR-228ENST00000574437 CHST5Q9GZS9 411 aa12.97□□□□□ -0.33
ABR-228ENST00000574437 RCL1Q9Y2P8 373 aaKnown RBP12.97□□□□□ -0.33
ABR-228ENST00000574437 SIT1Q9Y3P8 196 aa12.97□□□□□ -0.33
ABR-228ENST00000574437 ZFAND5O76080 213 aa12.97□□□□□ -0.33
ABR-228ENST00000574437 FOLR2P14207 255 aa12.97□□□□□ -0.33
ABR-228ENST00000574437 NOVA1P51513 510 aaKnown RBP12.97□□□□□ -0.33
ABR-228ENST00000574437 CLINT1Q14677 625 aa12.97□□□□□ -0.33
ABR-228ENST00000574437 SNAI3Q3KNW1 292 aa12.97□□□□□ -0.33
ABR-228ENST00000574437 SUMF1Q8NBK3 374 aa12.97□□□□□ -0.33
ABR-228ENST00000574437 OR2M3Q8NG83 312 aa12.97□□□□□ -0.33
ABR-228ENST00000574437 OR52M1Q8NGK5 317 aa12.97□□□□□ -0.33
ABR-228ENST00000574437 OR11L1Q8NGX0 322 aa12.97□□□□□ -0.33
ABR-228ENST00000574437 SLAMF9Q96A28 289 aa12.97□□□□□ -0.33
ABR-228ENST00000574437 TUBD1Q9UJT1 453 aa12.97□□□□□ -0.33
ABR-228ENST00000574437 FOXI3A8MTJ6 420 aaPredicted RBP12.97□□□□□ -0.33
ABR-228ENST00000574437 SMIM6P0DI80 62 aa12.97□□□□□ -0.33
ABR-228ENST00000574437 HOXB1P14653 301 aaPredicted RBP12.97□□□□□ -0.33
ABR-228ENST00000574437 RAB5AP20339 215 aa12.97□□□□□ -0.33
ABR-228ENST00000574437 OMGP23515 440 aa12.97□□□□□ -0.33
ABR-228ENST00000574437 PTGDSP41222 190 aa12.97□□□□□ -0.33
ABR-228ENST00000574437 CPEB2Q7Z5Q1 589 aaKnown RBP12.97□□□□□ -0.33
ABR-228ENST00000574437 PP6455Q8WZ26 134 aa12.97□□□□□ -0.33
ABR-228ENST00000574437 GSN-AS1Q9NRJ2 163 aa12.97□□□□□ -0.33
ABR-228ENST00000574437 NECAP2Q9NVZ3 263 aa12.97□□□□□ -0.33
ABR-228ENST00000574437 STARD10Q9Y365 291 aa12.97□□□□□ -0.33
ABR-228ENST00000574437 RFNGQ9Y644 331 aa12.97□□□□□ -0.33
ABR-228ENST00000574437 CACNA1EQ15878 2313 aa12.97□□□□□ -0.33
ABR-228ENST00000574437 ADAMTS9Q9P2N4 1935 aa12.96□□□□□ -0.33
ABR-228ENST00000574437 NPIPA2E9PIF3 369 aa12.96□□□□□ -0.33
ABR-228ENST00000574437 NPIPA3F8WFD2 350 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms